Halobaculum rubrum: K6T25_11050
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Entry
K6T25_11050 CDS
T07963
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hrm
Halobaculum rubrum
Pathway
hrm03022
Basal transcription factors
hrm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K6T25_11050
09124 Replication and repair
03420 Nucleotide excision repair
K6T25_11050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrm03021
]
K6T25_11050
03036 Chromosome and associated proteins [BR:
hrm03036
]
K6T25_11050
03400 DNA repair and recombination proteins [BR:
hrm03400
]
K6T25_11050
Enzymes [BR:
hrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
K6T25_11050
Transcription machinery [BR:
hrm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K6T25_11050
Chromosome and associated proteins [BR:
hrm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
K6T25_11050
DNA repair and recombination proteins [BR:
hrm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K6T25_11050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DUF218
DEAD
ResIII
PhoH
AAA_25
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QZY01089
LinkDB
All DBs
Position
complement(2125787..2128210)
Genome browser
AA seq
807 aa
AA seq
DB search
MTEATDEPWRTVFGHPDPYPEQADGIEAARTVADDGGFLALEGACGTGKTMLALTAGIDL
VRDPDSDYERVLVLTSVKQQLRQFEADLRTINDDLPDDWRPVSGMTLVGKADVCPYAREN
RGGIDTSNVYERCEGLRERTRDLVGDGGETTAGALAEQARRAQTGLSDTGDDGASYLETA
GEPTPYLPEMPEHGGSATRDGVEYCPFYAQYLDDLPEEGDAAEAVPFDFADRGLIDAEEL
VRLSAGHGTCPHSMMGAILPQVEVVVGNYYHAFDPTTVGGFTGALVDDSTFVVCDEAHML
EPRVRDLVSDGVADASLRDAENELTRVLQPVQFEDSGRRVEGTTDADLVRGELADAEVSL
DEVKLVVEFLRDLREELDRRVEGFLDAERRGWRDDPTDLDDEEIPLRDPEEPGVDEITEW
ARDAGYGEKVWARAEQVGAVAARILDETEEEDGEARSASESSSGQSPRDRQRAAPGVGRT
LNAWYRCDHETYFRELELLRTWDETEPSDSWRRAYNARLALHNCVPADAIGERLADFGGG
VLMSATLAPLDVFREVTGLNYLESEGRPVEDRTYGLGFPEGNRASFAVDAPKFTFSNRGP
PGEDNETRRAHADAAAEVAATTPGNVLVGMPSYGEAEWMAGELEANGRVDKAVLIDESSD
DTATEALKTDFFDGDAKVLVTSIRGTLTEGVDYEGDRLAAAVICGVPIINTSSPRTRAVK
TAYDREFGEGFETALTVPAVRKARQAIGRVIRGSDEVGVRCLIDARYARESWNAVREYLP
EYEREEFRPVSSDMLRFGLERFWDDHR
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaggcgacggacgagccgtggcgaaccgtgttcgggcaccccgacccgtacccc
gagcaggccgacgggatcgaggcggcccgcaccgtcgccgacgacggaggattcctcgcg
ctggaaggcgcatgcggcaccgggaagacgatgctggcgctgaccgccggcatcgacctg
gttcgcgaccccgacagcgactacgagcgcgtgctcgtcctcacgagcgtcaagcagcag
ctccgacagttcgaggcggacctccgcacgatcaacgacgacctcccggacgactggcgc
cccgtctccgggatgacgctcgtcgggaaggccgacgtgtgcccgtacgcccgcgagaac
cgcggcggcatcgacacctcgaacgtgtacgagcgctgcgaggggctgcgcgagcgcacc
cgggacctcgtcggcgacggcggcgagacgaccgcgggcgcgctcgccgagcaggcccgc
cgcgcgcagaccggactctccgacaccggcgatgacggggcgagctacctcgaaacggcg
ggcgagccgacgccctatctcccggagatgcccgaacacggaggatcggccacccgggac
ggggtcgagtactgccccttctacgcacagtacctcgacgacctcccggaggagggcgac
gccgcggaggcggtgccgttcgatttcgccgaccgcggactgatcgacgccgaggagttg
gtccgcctctcggcgggccacggcacctgcccgcactcgatgatgggggcgatcctcccg
caagtggaggtcgtcgtcggcaactactatcacgcgttcgacccgacgacggtcggcggg
ttcacgggcgcgctggtcgacgactcgacgttcgtcgtctgcgacgaggcgcacatgctc
gagccgcgcgtccgggatctggtctccgacggcgtcgccgacgcgagccttcgcgacgcc
gagaacgaactgacgcgcgtcctccagcccgtgcagttcgaggactccggacgccgggtc
gaggggacgaccgacgccgacctcgtgcgcggcgagctggccgacgccgaggtgagcctc
gacgaggtgaagctggttgtcgagtttctccgcgacctccgcgaggaactggaccgccgc
gtcgagggcttcctcgacgccgagcgccgcggctggcgcgacgacccgaccgacctggac
gacgaggagatcccgcttcgcgaccccgaggagcccggcgtcgacgagataaccgagtgg
gcccgcgacgccggctacggcgaaaaagtgtgggccagggccgagcaggtgggcgccgtc
gccgcgcggatcttggacgaaacagaagaggaggacggcgaggcgcgaagcgcctcggaa
tcgtcgagcgggcaaagcccgcgagaccgccagcgcgccgccccgggcgtcggacggacg
ctcaacgcctggtaccgttgcgatcacgagacgtacttccgggaactcgaactcctgcgc
acgtgggacgagaccgagccgtccgactcctggcgccgcgcctacaacgcccggctcgcg
ctgcacaactgcgtgcccgcggacgccatcggcgagcgcctcgccgacttcggcggcggc
gtgctcatgtcggcgacgctcgcgccgctcgacgtgttccgggaggtgacggggctcaac
tacctcgagtccgagggacgacccgtcgaggatcggacctacggcctcgggttccccgag
gggaaccgggcgtcgttcgcggtcgacgcgccgaagttcacgttctcgaatcgcggtcct
cccggcgaggacaacgagacccggcgcgcgcacgccgacgccgcggcggaggtggcggca
acgacacccggaaacgtcctcgtcgggatgcccagctacggcgaggcggagtggatggcc
ggcgagttggaggcgaacggccgggtcgacaaggctgtcctcatcgacgagtccagcgac
gacaccgcgaccgaggcgctcaaaacggacttcttcgacggcgacgcgaaggtgctcgtc
accagcatccgcggcaccctcaccgagggcgtcgactacgagggggaccgcctcgccgcg
gcggtgatctgcggcgtcccgatcatcaacacgtcgtcgccgcggacgcgtgcggtgaag
acggcgtacgaccgggagttcggcgaggggttcgagacggcgctaaccgtccccgcggtt
cggaaggcccggcaggcgatcggtcgggtgatccgcggcagcgacgaggtcggcgtgcgg
tgtctgatcgacgcgcgctacgcgcgcgagtcgtggaacgcggtccgggagtacctcccc
gagtacgagcgcgaggagttccgcccggtgagctcggacatgctacgcttcgggctggag
cggttctgggacgatcatcggtag
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integrated database retrieval system
