Halobaculum rubrum: K6T25_12725
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Entry
K6T25_12725 CDS
T07963
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hrm
Halobaculum rubrum
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrm03000
]
K6T25_12725
Transcription factors [BR:
hrm03000
]
Prokaryotic type
Helix-turn-helix
Other families
K6T25_12725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAT
PAS_9
HTH_10
PAS
PAS_3
PAS_4
Response_reg
GAF_2
DmsR_N
PAS_8
GAF
BamM_C
SIP1
Motif
Other DBs
NCBI-ProteinID:
QZX99109
LinkDB
All DBs
Position
2479996..2482044
Genome browser
AA seq
682 aa
AA seq
DB search
MTRSDTRKTRSDTRQNGHDERTDEASVAVLFAGDDLADGPTVADLSGEERFDVTRSGDFI
EAADTVDEHTVDCVVTTVSEDGFDGIAFLESVRQEHTELPVVVVAESIDGELARRAVDAD
ATALVPTNEPDAVEAVVDSVDSNVTTYDREAGTRMPISDLTVKAERRLKERALDEAPIGI
TISDATDPEEPMIYMNDSFEEITGYPPDEVIGANHRFLQGPETDPEKVAEVSEAIKEKQG
IQTVLRNYTRDGSEFWNQISISPILDEHGDISHFVGFQMDVTERKQAQQELVAERESLDR
VLDRVNGLVSDVTSALVRAESRDEVEQLITERLGTGGEYTAAWLGRYDETAGRVDITEQA
GARTVETEMVDLDDDGDGVRTLRETIDRQAVHRLDDASDLLGVAGGGTCVLVPLTYRSTT
YGVVGVLDEGNLLDSRERVVLESLGRSVGVSINDVLTKRTITTDTVLNIGVELSDDDLFL
PDLAAELGARFDHEATIADEHGSEVVTVVSTDFDDTEALAEQAMRHEDVVSVEPLVETDD
ETVVQFRLSSSPLVEVLSEAGSRVTKLHADSRTLEVEFRVGTEQAARRVLDALRAEYDRV
ELVAYHEDEPQQTANGFREELRSQLTDRQLTALRKAHVSGYFEWPRRAEGKQLAESMDIV
PSTYHQHLQAAKRKLVDAFFER
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacacgatccgacactcgcaagacacgatccgacacccgccagaacggacacgacgag
cggaccgacgaggcgtccgtcgccgtgctgttcgccggagatgacctcgcggacggcccc
acggttgccgatctctcgggggaagaacggttcgacgtcacgcggtcgggagacttcatc
gaggccgccgacacggtggacgaacacaccgtcgactgcgtcgtcacgaccgtcagcgag
gacggcttcgacggtatcgcgttcctcgaatccgtccgccaagagcacaccgaactcccc
gtggtagtcgtcgccgaatcgatcgacggcgagctcgcacggcgcgccgtcgacgcggac
gcgactgcgctcgtcccgacgaacgaaccggacgccgtggaggcggtcgtcgactccgtg
gactcgaacgtcacgacgtacgaccgggaggcggggacgcgcatgccgatctccgatctc
accgtcaaagccgaacgacgtctgaaagagcgggcgctcgacgaagcccccatcggcatt
acgatatcggacgctaccgacccggaagagccgatgatctacatgaacgactccttcgag
gagatcacggggtatccgccggatgaagtgatcggcgccaaccaccgcttcctccaaggg
cccgagacagaccccgagaaggtcgcggaggtgtccgaggcgatcaaagagaagcagggg
atccagacggtcttgcggaactacacacgcgacggaagcgagttctggaaccagatcagt
atcagtcccatcctcgacgaacacggggatatctctcacttcgtcgggttccagatggac
gtcaccgagcgaaaacaggcgcaacaagagctggtggccgagcgggagtcactcgatcgg
gtgctcgaccgggtgaacggactcgtgagcgacgtcacctccgcgttggtgcgtgcggag
agccgcgacgaggtcgagcagctgatcaccgagcgtctcggtaccggcggggagtacacg
gcggcgtggctcggtcgatacgacgagaccgcgggccgtgtggacatcacggaacaggcg
ggcgcgcggacggtcgagacggagatggtcgacctcgacgacgacggcgacggcgttcga
accctccgcgagaccatcgatcgacaggcggtccatcgactcgacgacgcgagcgatctg
ctcggcgtcgcgggcggtggaacctgtgtgctcgtcccgttgacctatcggtcgacgacc
tacggcgtcgtcggggtgctcgacgaggggaacctcctcgacagtcgcgaacgggtggta
ctcgagtcgctgggacgcagcgtcggcgtgtcgataaacgacgtgctgacgaagcggacc
attacgaccgacacagtcctcaacatcggggtagagctgtcggacgacgacctcttcctc
cccgatctcgccgccgagctcggtgcccggttcgaccacgaggcgacgatcgccgacgaa
cacggctccgaggtcgtgaccgtcgtcagtacggacttcgacgacacggaggcgctcgcc
gaacaggcgatgcgtcacgaggacgtcgtctccgtcgagccgctcgtcgagaccgacgac
gagaccgtcgttcagttccggctgtcgagttcgccgctcgtggaggtcctctcggaggcg
ggaagccgcgtgacgaaactgcacgccgattcgcggacgctcgaagtcgagtttcgcgtc
ggaaccgaacaggcggcgcgtcgcgttctcgacgcgctcagagcggagtacgatcgggtc
gagctcgtcgcctaccacgaggacgaaccgcaacagaccgccaacgggttccgggaggag
ctccggagccagctcaccgatcgccagttgaccgcgttgcgaaaggcacacgtcagcggc
tacttcgagtggccacggcgtgccgagggcaagcaactcgccgagtcgatggatatcgtc
ccctcgacgtatcaccagcacctccaagcggcgaagcgcaagctcgtcgacgcgttcttc
gagaggtga
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