Halobaculum rubrum: K6T25_13375
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Entry
K6T25_13375 CDS
T07963
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K22516
formate dehydrogenase (coenzyme F420) alpha subunit [EC:
1.17.98.3
1.8.98.6
]
Organism
hrm
Halobaculum rubrum
Pathway
hrm00680
Methane metabolism
hrm01100
Metabolic pathways
hrm01120
Microbial metabolism in diverse environments
hrm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
K6T25_13375 (fdhF)
Enzymes [BR:
hrm01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
K6T25_13375 (fdhF)
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.3 formate dehydrogenase (coenzyme F420)
K6T25_13375 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Malic_M
Motif
Other DBs
NCBI-ProteinID:
QZX99236
LinkDB
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Position
complement(2606052..2608169)
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AA seq
705 aa
AA seq
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MSNEDGGPVKTICPYCGVGCGIQITREEDGEVNFRPWADAPVNEGSVCIKGGAATQSVNH
EDRLTDPLIRDDDGTFREASWGEAYDLIVDEMERIRDEHSPQAMGFYGCSKAMNEENYLV
QKLARHYGTNSVDTCTRMCHSSTVYALKNSLGEGAMTNSMADLEEAADVFWIQGANPGEQ
HPIANSQYFRQAVLEGATVIQVDPHANKTTRSFNIGETDRHMHLQVEPGTDIPFLNVVIE
TILENDWVDEEFIAERTDGFEDLTETLSDFDKEAAAEECGVPLEDIELAAEKYAKANNAA
IFTGMGMSQHTCGVDNVQNEINLALITGNLGRPGTGVNPLRGQNNVQGASDVGAMPNVLP
GYRDVSDPEVRADVEEVWGFEIPSEPGLTNVEQSHEIGSTIHGLYVMGENPVMSEPDTNM
VEQRLAAVDFMVVQDIYRTETAEYADVILPATSWAERDGTVVNTDRRTQRMRGVEKVHPN
TKDDLEILCDVGTRLFGDGSFDFEGPEEVFEELRQVAPIFHGMTYDRLGETGIHWPCYEP
GDEGDPFLYEEGFTTESGRGRIEGVRHQPPKETPDDEYPLILTTGRIIEHYNTGTMSRRS
ETLTHVEPENFVDIHPNDAEHYDIEDGDYVRLTSRRGEIELEARVTEDIKEGTVWTTPHF
ADAAGNRLTNDVLDDRAKIPEYKAAAADIEVSLEPSDGTDAPADD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgaggacggggggccggtcaagaccatctgtccgtactgtggtgtggggtgc
ggtatccaaatcacgcgagaggaggacggcgaggtcaacttccgaccctgggccgacgca
ccggtcaacgaggggagcgtctgcatcaagggtggtgcggcgacgcagtcagtcaaccac
gaggaccggttgaccgacccgctgatccgcgacgacgacggtacgttccgtgaggcgtcg
tggggcgaggcctacgacctgatcgttgacgagatggagcgcatccgcgacgaacacagc
ccgcaggcgatggggttttacggctgttcgaaggccatgaacgaggagaactacctcgtc
cagaaactggcccgccactacggcaccaacagcgtcgacacctgtacgcggatgtgccac
tcctccacggtgtacgcgctcaaaaacagcctcggcgagggcgccatgaccaacagtatg
gccgacctggaggaggcagccgacgtgttctggatccagggagccaaccccggcgagcag
caccccattgccaacagccagtacttccgacaggccgtactggagggggcaaccgtcatt
caggtcgaccctcacgccaacaagacaacgcgctcgttcaatatcggagagacggaccgg
cacatgcatctccaagtggagccgggaacggacatccccttcctcaacgtcgtcatcgag
acgattctggagaacgactgggtcgacgaggagttcatcgcggagcgcaccgacggattc
gaggacctcacggagacgctttcggacttcgacaaggaagccgccgccgaggagtgtggc
gtccccctcgaggacatcgaacttgccgccgagaagtacgcgaaagcgaacaacgccgca
atcttcaccggcatggggatgagccagcacacctgcggcgtggacaacgtccaaaacgag
atcaacctcgcgctgatcacgggcaatctcggccgcccgggcaccggtgtcaatccgctg
cgtggtcagaacaacgtgcagggtgcctcggacgttggcgcgatgccgaacgtcctcccc
ggctaccgcgacgtgtccgatcccgaggtccgcgccgacgtcgaggaggtctgggggttc
gagatcccgtccgaacccggcctgacgaacgtcgaacagtcccacgagatcgggagcacg
atccacgggctctacgtcatgggtgagaaccccgtgatgagcgaacctgacaccaacatg
gtcgaacagcggctggctgcggtggatttcatggtggtccaggacatctacaggaccgag
accgccgagtacgccgacgtgattctgccggccacctcgtgggccgaacgcgacgggacg
gtcgtcaacacggaccgccgaacccagcggatgcgcggcgtcgagaaggtccacccgaac
acgaaagatgacctcgagatcctctgtgacgtgggcacccgcctgttcggcgacgggagc
ttcgacttcgaggggcccgaggaggtgttcgaggagctacggcaggtcgcgcccatcttc
cacggtatgacgtacgaccgcctcggcgagacgggcatccactggccctgctacgaaccc
ggcgacgagggcgacccgttcctctacgaggaggggttcaccaccgaaagcggccgcgga
cggatcgagggcgtgcgccaccagccccccaaggaaacgcccgacgacgagtacccgctt
atcctcaccacgggccggatcatcgaacactacaacacggggacgatgagccgccgctcc
gagacgctcacccacgtcgagccggagaacttcgtcgacattcacccgaacgacgccgag
cactacgacatcgaggacggcgactacgtgaggctcacgtcccggcgcggagaaatcgag
ctcgaggcccgtgtcaccgaggacatcaaggaaggcaccgtgtggacgaccccgcacttc
gcagacgccgcggggaaccgcctgacaaatgatgtgctcgacgatcgagcaaagataccc
gagtacaaggctgcagccgcggatatcgaggtctcgctcgaaccgtccgacggtaccgac
gcccccgcggacgactga
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