Halobaculum rubrum: K6T25_13385
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Entry
K6T25_13385 CDS
T07963
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hrm
Halobaculum rubrum
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrm03400
]
K6T25_13385
Enzymes [BR:
hrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K6T25_13385
DNA repair and recombination proteins [BR:
hrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
K6T25_13385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QZX99238
LinkDB
All DBs
Position
2611887..2615960
Genome browser
AA seq
1357 aa
AA seq
DB search
MIDDERLEPEQLAAKNALDRNVSLRAGAGTGKTTTLTARYVAIVERELATVRERLADGTD
TRGEALDHAASIPEHILTTTFTDRAAADLTGTVREEIDAKLSAAEDELTFALWRAVGDAL
DDAYVQTLHSLCRRVLEERAIGGLDTPRVASDHPLAKYGLTYADLDVGFDVVEGDEAEEL
AREAAAATLREEETDAIRTLARRYDRDTVEDVCYDLLTASPRSQPYGWLEWMNRIGSAEE
YVGEILSLQADPERLRAVWAEIAEPIGVVASLAEEAAGRPTNNVVGPLLEALESTGIDSR
AAFDAAPLTDQLATCYAVADAVRTGDGDRYNADWLFPSAYEIDGASESDEHRLYDAVWAI
ATAVPDGWATTDLDVDAEHASYEYVDAFATVATTAFERYAEAKRRDNVVDFGDLIALANH
FLGQLDADARREFGFFPDGAADGPNGYVMVDEFQDTNADQWRVVRALAAPDPHEVDTTNL
FVVGDDKQSIYRFRGADVSVFDEADKTLTEANDRAGVAADQAPLTTNFRTLPEPLHAING
LFDRVFPRGDGGDDAPTADWATTDGDGTVAAFEAMSEPLASARRSTTGSGDRIDPIVEYM
PVPVDGDQQTDLLADGHQLRAERRDDGNALEAKAVATRVAQLLSDETTVFETVDNDHPGY
DRLAHDDEDVPVERIRDVAPDDVAILLSSRGGLDEYERELRELGVPYTVIKGAGLFDSPE
VTTLVNLLRVLVDPTNDRALYGLLRSPMFGRTDDAIARLAAARGDDESLWGALRTAHHEE
WESIAEDLRRFRAYAGAAEQDEYNRVATWSELLTRVLDETGFLAAVGADERGDKAVANVD
EFRSRLRAFSEDGVHSLAELLDRIERRADGDARDAEANVVEFDHGDAGGGGVDLLTIHES
KGMEYEVVVVPKLGRNFQSASGARLAESVEFELVDGDGDRVPLFGIKGPDPDDPYDDTAT
VARDIAQQRRRFEERAEQKRLLYVAATRARDHLLLSGQHKGGDDDYPAGFEPPDPGNAKT
WRDWVQAVLFDGVGCPGADDAAAVVEGLRRDGVYERALPYDLRGEQAVGTVTVRLPPADA
TYEPPASTADLGLDEFVDGVTTPGPTVLELSPSTCTGLSQGEKTLQRHGGRIVAVDTGDA
VHRTGDGGESEGTSTPGDLPATAYGELLHRLCEVQPPDDRVHEFARDVLAEHGEPVPADE
KRIEEAIDAATRTAGRARARVDEVLNAVDGDVLARYDEYRLDVAIDGGELEVDRVDLAGE
IDHLAVTDDTYHVFDYKTDRAGAEDGDAFVEKRMQHHEPQLRAYAAALSAADPTRDVVVR
LVFTDLDCRIARMAETDDAVYRLLDMLGVHLRERLLE
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgacgaacgcctcgaaccggaacagctcgccgcgaagaacgcactcgaccgg
aacgtctcgttgcgtgccggtgcagggacgggaaagacgaccacgctcaccgcgcgatac
gtcgcgatcgtcgagcgcgaactcgcgaccgtccgcgagcgactcgccgacggcaccgac
acccgtggcgaagccctcgatcacgccgcatcgatcccggagcatatcctgacgacgacg
ttcaccgaccgcgccgccgcggacctcaccggaacggtccgcgaggagatcgacgcgaag
ctctcggcggccgaagacgagttgacgttcgcgctgtggcgtgccgtcggtgacgcgctc
gatgacgcgtacgtccaaacgctccacagtctctgtcgacgcgtcctggaggagcgtgcc
atcggcgggctcgacacaccgcgagtcgcgtccgaccacccgttggcgaagtacggcctg
acatacgctgacctcgacgtcggcttcgatgtcgtcgaaggggacgaggcagaggaactc
gcccgcgaggcggccgcggcgacgcttcgtgaagaagagaccgatgcgatccgcacgctc
gcacgtcgctacgaccgcgacaccgtcgaggacgtctgttacgacctactgaccgcctct
ccccgctcacaaccgtacggctggttggagtggatgaaccgcatcgggagcgcggaggag
tacgtcggagagatactctcgttgcaagccgaccccgaacggctccgtgcggtctgggcg
gagatcgccgaaccgatcggcgttgtcgcctcgctcgccgaggaggctgccggccgcccg
acgaacaacgtggtcggcccgctcctcgaggcgctggaatcgacggggatcgactcgcga
gctgcgttcgacgccgcaccactcaccgatcagctcgcgacctgttacgctgtggccgac
gcggtgcggaccggtgacggcgaccgctacaacgccgactggctgttcccgagcgcctac
gagatcgatggggcatccgaatcggacgaacacagactgtacgacgctgtatgggcgatc
gcgacggcagtgcccgacgggtgggcgacgactgacctcgacgtggacgccgagcacgcc
tcctacgagtacgtcgacgcgttcgcgacggtcgcgacgacggccttcgagcgctacgcc
gaggcgaaacgtcgcgacaacgtcgtcgacttcggcgacctgatcgcgctggccaaccac
ttcctcggtcaactcgacgccgatgctcgccgcgagttcggcttcttccccgacggcgcg
gcggacggcccgaacggctacgtgatggtcgacgagttccaggacaccaacgccgaccag
tggcgcgtcgtccgtgcgttggccgcacccgatccccacgaagtagacacgacgaacctg
ttcgtcgtcggcgacgacaaacagagcatctaccgcttccgcggggcggacgtgtccgtg
ttcgacgaggcggacaagacgctcacagaagcaaacgaccgcgcgggtgtcgcggccgat
caggcaccgctcacgactaacttccgaacgctgcccgagccgttgcacgcgatcaacggg
ctgttcgaccgcgtgttcccacggggcgacggcggcgatgatgccccgaccgccgactgg
gccacgacggatggggacggcaccgtcgccgcgttcgaggcgatgagtgagccgctggcg
agtgcacggcggtcgacgaccgggtccggcgaccgcatcgacccgatcgtcgagtacatg
ccggtccctgtcgacggcgaccagcagaccgacctgctggctgacggccaccaactccgt
gcggaacggcgcgacgacgggaacgccctagaggccaaggcggtcgcgacccgcgtcgca
cagctgttgagtgacgagacgacggtgttcgagacagtcgacaacgatcacccggggtac
gatcggctcgcgcacgacgacgaggacgtccccgtcgagcggatccgcgacgtcgccccc
gacgacgttgccatcctgttgagttcccgcggcggactcgacgagtacgagcgcgagctc
cgcgagttgggcgtgccctacaccgtgatcaagggtgccggcctgttcgactcgcccgag
gtcacgacgctggtgaaccttttgcgcgtcctggtcgacccgacgaacgaccgtgcgctg
tacgggctgcttcggtcgccgatgttcggtcggacggacgacgcgatcgccaggctcgcg
gccgcccgcggcgacgatgagtcgctgtggggggcgctacggactgctcaccacgaggag
tgggagtcgatcgccgaggacctccgccggttccgtgcgtacgcgggcgcggcagaacag
gacgagtacaaccgcgtcgcgacatggagcgaactcctcacacgggttctcgacgagacg
ggattcctcgcggctgtcggcgcggacgagcgcggtgacaaggccgttgccaacgtcgac
gagttccgctcccgactgcgggcgttcagcgaggacggcgtccacagcctcgcggagctg
ctcgaccggatcgagcggcgtgccgacggcgacgctcgtgacgccgaggcgaacgtcgtc
gagttcgaccacggcgacgccggtgggggtggagtcgatctcctcactatccacgagtcg
aagggcatggagtacgaggtcgtcgtcgtcccgaagctcgggcggaacttccagagcgcg
agcggcgcccggctcgcggaatcggtcgagttcgaactcgtcgacggggacggcgaccgc
gttccgttgttcgggatcaagggacccgacccggacgacccgtacgatgatactgccacg
gtcgctcgcgacatcgcacagcaacgccggcggtttgaggaacgggccgagcagaaacgc
ctgctgtacgtcgcggcgacgcgggcgcgtgaccacctgctcctctcgggtcagcacaag
gggggagacgacgactaccctgccgggttcgaaccgccggaccccgggaacgcgaagacg
tggcgcgactgggtgcaggcggtgttgttcgacggtgtcggttgtccgggagcggacgac
gccgcggcggtcgtcgaggggctccgacgcgacggcgtgtacgagcgagcgcttccatac
gacctgcggggcgagcaggccgtcgggacggtcactgttcgcctcccgcctgcggacgcg
acgtacgagccgcccgcttcgactgcggatctcggactcgacgagttcgtcgacggtgtg
acgactcccgggccgacagtgctggagctgtcaccgagtacctgtacggggcttagtcag
ggcgaaaagacgttgcagcggcacggtggccggatcgtcgcggtcgacacgggcgacgct
gtccatcgtacgggagacggcggtgagtctgaaggaacgtcgacaccgggcgatctcccg
gcgaccgcgtacggggaactcctccaccggctgtgtgaggtacagccaccggatgatcgt
gtccacgagttcgcacgggacgtcctcgccgaacacggcgagccggtacccgctgatgag
aagcgtatcgaggaagcgatcgacgccgcgactcgcactgccggtcgggcgcgtgcacgg
gtcgacgaggtgctcaatgcggttgacggggacgtcctcgcccgctacgacgagtaccgc
ctcgacgttgcgatcgacggcggcgaactcgaggtcgaccgcgtcgatctcgctggagag
atcgaccacctcgccgtgaccgacgacacgtaccacgtgttcgactacaagactgaccgg
gccggagccgaagacggcgacgccttcgtcgaaaagcggatgcaacaccacgagccacag
ctgcgtgcctacgctgcggcactttcggctgctgacccgactcgggacgtggtcgttcgg
ctggtgtttaccgatctcgactgtcggatcgcgaggatggccgaaacggacgacgcagtc
taccggctcctcgatatgctcggtgtccaccttcgtgaacgtctgttagagtga
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