KEGG   Halobaculum rubrum: K6T25_14140
Entry
K6T25_14140       CDS       T07963                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hrm  Halobaculum rubrum
Pathway
hrm03030  DNA replication
hrm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hrm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K6T25_14140 (fen)
   03410 Base excision repair
    K6T25_14140 (fen)
   03450 Non-homologous end-joining
    K6T25_14140 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hrm03032]
    K6T25_14140 (fen)
   03400 DNA repair and recombination proteins [BR:hrm03400]
    K6T25_14140 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hrm04147]
    K6T25_14140 (fen)
DNA replication proteins [BR:hrm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    K6T25_14140 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     K6T25_14140 (fen)
DNA repair and recombination proteins [BR:hrm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     K6T25_14140 (fen)
Exosome [BR:hrm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   K6T25_14140 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc SVIP 14-3-3
Other DBs
NCBI-ProteinID: QZX99371
LinkDB
Position
complement(2774161..2775138)
AA seq 325 aa
MGNADLRDIAHIEDVAFEDLSGVVAVDAHNWLYRYLTTTVKFTSDHRYTTDEGEEVANLI
GIVQGLPKFFDNDLTPVFVFDGGVTDLKDDEVAKRRAAREEAEERRKDAEERGDSVEAAR
LEARTQRLTDTIHGTSREVLRLLDVPVVEAPAEGEAQCAYMNRVGDADFSGSEDYDTMLF
GGPRTLRQLTSKGDPELMDLERTLADHDITQEQLVDVAMLCGTDFNEGVRGIGPKTALTA
VKEHGDLFAVLDARDAEVPNAERVREFFHSPPVTDDYAFDTTISPDVDAARAYVVDEWEV
DPDEVERGFERIEAALTQTGLDDWT
NT seq 978 nt   +upstreamnt  +downstreamnt
atgggaaacgcggatctgcgtgacatcgcgcacatcgaggacgtcgccttcgaggatctg
tccggtgtggtcgcggtggacgcgcacaactggctgtaccggtatctcacgacgacggtg
aagttcaccagcgaccaccgctacaccaccgacgagggcgaggaggtcgcgaacctcatc
gggatcgtccaggggctgccgaagttcttcgacaacgacctcacgccggtgttcgtcttc
gacgggggcgtcaccgacctgaaggacgacgaggtcgcgaagcgtcgggcggcacgcgag
gaggccgaggagcgcaggaaggatgccgaggagcgcggcgattcggtcgaggcggcgcgc
ctggaggcgcgcacgcaacggctcaccgacaccatccacgggacctcccgggaggtgcta
cgcctgctcgacgtgcccgtcgtcgaggcgcccgcggagggcgaggcgcagtgtgcgtac
atgaaccgcgtcggcgacgccgacttctcgggcagcgaggactacgacacgatgctgttc
ggcgggccgcgaacgctccgacagctcacgtcgaagggcgacccggagctgatggacctg
gagcggaccctcgcggatcacgacatcactcaggaacagctcgtggacgttgcgatgctg
tgcggcactgacttcaacgagggcgttcgtgggatcgggccgaagacggcactgacggcc
gtgaaggagcacggcgacctgttcgcggtcctcgacgcccgcgacgccgaggtccccaac
gccgagcgggtccgcgagttcttccactccccgccggtgaccgacgactacgcgttcgac
acgacgatatcgccggacgtcgacgccgcccgcgcgtacgtcgtcgacgagtgggaggtc
gatcccgacgaggtcgaacgcggcttcgagcgcatcgaggccgcgctcacgcagacggga
ctcgacgactggacctga

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