Halobaculum rubrum: K6T25_14140
Help
Entry
K6T25_14140 CDS
T07963
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
hrm
Halobaculum rubrum
Pathway
hrm03030
DNA replication
hrm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K6T25_14140 (fen)
03410 Base excision repair
K6T25_14140 (fen)
03450 Non-homologous end-joining
K6T25_14140 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrm03032
]
K6T25_14140 (fen)
03400 DNA repair and recombination proteins [BR:
hrm03400
]
K6T25_14140 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrm04147
]
K6T25_14140 (fen)
DNA replication proteins [BR:
hrm03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
K6T25_14140 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
K6T25_14140 (fen)
DNA repair and recombination proteins [BR:
hrm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
K6T25_14140 (fen)
Exosome [BR:
hrm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K6T25_14140 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
SVIP
14-3-3
Motif
Other DBs
NCBI-ProteinID:
QZX99371
LinkDB
All DBs
Position
complement(2774161..2775138)
Genome browser
AA seq
325 aa
AA seq
DB search
MGNADLRDIAHIEDVAFEDLSGVVAVDAHNWLYRYLTTTVKFTSDHRYTTDEGEEVANLI
GIVQGLPKFFDNDLTPVFVFDGGVTDLKDDEVAKRRAAREEAEERRKDAEERGDSVEAAR
LEARTQRLTDTIHGTSREVLRLLDVPVVEAPAEGEAQCAYMNRVGDADFSGSEDYDTMLF
GGPRTLRQLTSKGDPELMDLERTLADHDITQEQLVDVAMLCGTDFNEGVRGIGPKTALTA
VKEHGDLFAVLDARDAEVPNAERVREFFHSPPVTDDYAFDTTISPDVDAARAYVVDEWEV
DPDEVERGFERIEAALTQTGLDDWT
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgcggatctgcgtgacatcgcgcacatcgaggacgtcgccttcgaggatctg
tccggtgtggtcgcggtggacgcgcacaactggctgtaccggtatctcacgacgacggtg
aagttcaccagcgaccaccgctacaccaccgacgagggcgaggaggtcgcgaacctcatc
gggatcgtccaggggctgccgaagttcttcgacaacgacctcacgccggtgttcgtcttc
gacgggggcgtcaccgacctgaaggacgacgaggtcgcgaagcgtcgggcggcacgcgag
gaggccgaggagcgcaggaaggatgccgaggagcgcggcgattcggtcgaggcggcgcgc
ctggaggcgcgcacgcaacggctcaccgacaccatccacgggacctcccgggaggtgcta
cgcctgctcgacgtgcccgtcgtcgaggcgcccgcggagggcgaggcgcagtgtgcgtac
atgaaccgcgtcggcgacgccgacttctcgggcagcgaggactacgacacgatgctgttc
ggcgggccgcgaacgctccgacagctcacgtcgaagggcgacccggagctgatggacctg
gagcggaccctcgcggatcacgacatcactcaggaacagctcgtggacgttgcgatgctg
tgcggcactgacttcaacgagggcgttcgtgggatcgggccgaagacggcactgacggcc
gtgaaggagcacggcgacctgttcgcggtcctcgacgcccgcgacgccgaggtccccaac
gccgagcgggtccgcgagttcttccactccccgccggtgaccgacgactacgcgttcgac
acgacgatatcgccggacgtcgacgccgcccgcgcgtacgtcgtcgacgagtgggaggtc
gatcccgacgaggtcgaacgcggcttcgagcgcatcgaggccgcgctcacgcagacggga
ctcgacgactggacctga
DBGET
integrated database retrieval system