Halobaculum rubrum: K6T25_14565
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Entry
K6T25_14565 CDS
T07963
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hrm
Halobaculum rubrum
Pathway
hrm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K6T25_14565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrm03021
]
K6T25_14565
Transcription machinery [BR:
hrm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
K6T25_14565
Prokaryotic type
Archaeal type
TFB
K6T25_14565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
A2L_zn_ribbon
Sigma70_r4
Trm112p
HTH_Tnp_ISL3
DUF7129
Zn_ribbon_RRN7
Cas12f1-like_TNB
DUF7972
DUF8054_C
Anti-TRAP
Cyclin_N
DZR
Zn_ribbon_double
HVO_0758
Motif
Other DBs
NCBI-ProteinID:
QZX99446
LinkDB
All DBs
Position
complement(2858092..2859120)
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AA seq
342 aa
AA seq
DB search
MSESETTISRYAENETESKERSGERTEETESVRVCPECGGNVVADEEHGETVCRDCGLVV
EEDAIDHGPEWRSFNNDGESKSRVGAPTTNMMHDNGLSTNIGWQNKDAYGNTLSTERRQQ
MQRLRTWHERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPG
RSIEGVASASLYAAARQANTPRSLDELTAVSRVDRMELTRTYRYIVRELKLEVAPADPAQ
YLARFASELGLSDEGEWRARGLLSTAGEAGVTSGKSPVGLAAAAVYAAALLTNEALTQSQ
VSDVAGVSEVTIRNRYKELLDAAEDAEGAPGSGGPDRGRANA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatcagaaaccacaatcagcaggtatgcggagaacgagacggagtcgaaggaa
cgatcgggcgaacggaccgaggagaccgaatcggtccgcgtctgtcccgagtgcggcggc
aacgtcgtcgccgacgaggagcacggcgagacggtctgccgcgactgcggactcgtcgtc
gaggaggacgcgatcgaccacggtcccgagtggcgctcgttcaacaacgacggcgagagc
aagtcgcgggtcggcgccccgacgacgaacatgatgcacgacaacgggctgtcgaccaac
atcggctggcagaacaaagacgcctacggcaacacgctctcgacggagcgccgccagcag
atgcagcggctgcgcacgtggcacgagcgcttccgcacgcgcgactccaaggagcgcaac
ctgaagcaggcgctcggggagatcgaccgcatggcctccgcgctcgggctgcccgagaac
gtccgcgagaccgcctccgtcatctaccgccgcgcgctcgacgaggacctcctccccggt
cgctcgatcgaaggcgtcgcctccgcgagcctgtacgccgcggcccggcaggcgaacacc
ccgcgctcgctcgacgagctgacggcggtgtcgcgggtggaccgcatggagctgacgcgg
acgtaccgctacatcgtccgcgaactgaagctggaggtcgctccggccgaccccgcgcag
tacctcgcgcggttcgcctccgagctggggctgtcggacgagggcgagtggcgcgcccgc
gggctgttgagcacggccggggaggccggcgtcaccagcgggaagtcccccgtcgggctc
gccgccgccgccgtctacgccgccgcgctgctcaccaacgaggcgctgacccagagccag
gtgagcgatgtcgcgggggttagcgaggtgaccatccgaaaccgctacaaggagctgctc
gacgcggccgaggacgccgagggcgctccgggctccggcgggcccgaccgcgggcgcgcg
aacgcctga
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