KEGG   Halobaculum rubrum: K6T25_14660
Entry
K6T25_14660       CDS       T07963                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
hrm  Halobaculum rubrum
Pathway
hrm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hrm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K6T25_14660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hrm03019]
    K6T25_14660
Messenger RNA biogenesis [BR:hrm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     K6T25_14660
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QZX99461
LinkDB
Position
2878772..2880124
AA seq 450 aa
MEVEIATIGGYEEVGRQMTAVRAGNDIVVFDMGLNLSQVLIHDNVETEKMHSLDLIDMGA
IPDDRIMSDMEGDVKAIVPTHGHLDHIGALSKLAHRYDAPIVSAPFTIELVKQQVQSENK
FNVDNDLVKMEAGETMSIGDSGNVELEFVHVTHSIIDAINPVLHTPEGAVVYGLDKRMDH
SPVLEDPIDMERFREIGREGNGVLCYIEDCTNAGRKGRTPSESHARNHVKDTLMSMEDYD
GGIVATTFSSHVSRVSSLVEYAQEIGREPVLLGRSMEKYSGTAERLDFVDFPDDLGMYGH
RKSVDRTFKRIMQEGKENYLPIVTGHQGEPRAMLTRMGRGETPYELDDGDKVVFSARVIP
EPTNEGQRYQSERLLKMQGARIYDDIHVSGHLREEGHYEMLDALEPQHVIPAHQDMKGFA
PYVDLASRKGYTLGRDLHVTENGNMIQLTE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggaagtagaaatcgcaacgatcggcggctacgaggaagtcggccgccagatgacggca
gttcgcgcagggaacgacatcgtcgtgttcgacatgggcctcaacctgagtcaggtcctg
attcacgacaacgtcgagacagagaagatgcacagcctggacctcatcgacatgggcgcc
attccggacgaccggatcatgagcgacatggagggcgacgtgaaggccatcgtgccgacg
cacggtcacctcgaccacatcggcgccctctcgaagctggcccaccgatacgacgcgccc
atcgtctcggcgccgttcaccatcgaactggtcaaacagcaggtccaaagcgagaacaag
ttcaacgtcgacaacgacctcgtcaagatggaggcgggcgagacgatgtccatcggcgac
tcgggcaacgtcgaactggagttcgttcacgtcacccactcgatcatcgacgcgatcaac
ccggtcctccacacgcccgagggcgcggtcgtctacggactcgacaagcgcatggaccac
tcgcccgtcctcgaggacccgatcgacatggagcgcttccgcgagatcggtcgcgagggc
aacggcgtcctctgttacatcgaagactgtaccaacgccggccggaagggccgcacgccc
tccgagtcgcacgcccgaaaccacgtcaaggacaccctgatgagcatggaggactacgac
ggcggcatcgtcgccacgacgttctcctcacacgtctcgcgggtctcctcgctcgtcgag
tacgcacaggagatcggccgcgagccggtgcttctggggcgctcgatggagaagtacagc
gggaccgcggagcgactggacttcgtcgacttcccggacgacctcgggatgtacggccac
cggaagtccgtcgaccggacgttcaagcggatcatgcaggagggcaaggagaactacctc
ccaatcgtcacgggtcaccagggcgaaccgcgcgcgatgctcacccggatgggccgcggc
gagaccccgtacgaactggacgacggcgacaaggtcgtcttctcggcccgggtcatcccg
gagccgacgaacgagggccagcgctaccagtccgagcggctcctgaagatgcagggcgcg
cgcatctacgacgacatccacgtgtcgggccacctccgcgaggaggggcactacgagatg
ctcgacgcgctggagcctcagcacgtcatccccgcccaccaggacatgaagggcttcgcg
ccctacgtcgacctcgcgagccggaaggggtacacgctggggcgtgacctccacgtcacg
gagaacgggaacatgatccagctgacggagtaa

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