Helobdella robusta: HELRODRAFT_100710
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Entry
HELRODRAFT_100710 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
hro
Helobdella robusta
Pathway
hro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HELRODRAFT_100710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_100710
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_100710
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
HELRODRAFT_100710
Spliceosome [BR:
hro03041
]
Complex B
Other components
Prp19-related factors
HELRODRAFT_100710
Complex C
HELRODRAFT_100710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
NRDE-2
TPR_2
Mad3_BUB1_I_2
RPN7
DUF5575_C
Motif
Other DBs
NCBI-GeneID:
20194466
NCBI-ProteinID:
XP_009020691
JGI:
Helro1_100710
UniProt:
T1ED14
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MEDIIFEEEDIPYEEEILRNPYSVKCWLRYIEHKKSAPNDVINMLYERALKELPGSYKIW
HSYLKLRLVQIKGININSNMYKDLNSTFERSLTFMHKMPRIWLEYLQFLIDQGFVTTTRR
AFDRALRSLPITQHQRIWNLYLLFLMKYPDLQETIVRCYRRYLKLMPEDSEDFIDYLKSV
DRLDEAAILLVKIINDDKFQSKYGKSKHQLWNQLCDLVSKNPTKVVSLKVEPIVRQGIKK
YTDQVGMLWNALADYYVRSQLFERARDIYEEAMLSVMTVRDFTQIFDAYTQFEDQIIRAK
MEATNSLGPTEDDDLELEMHLARLEDLMERRPLLLNSVLLRQNPHNVHEWHKRIKLYEGK
PKEIVETYTEAVEIVDPKQASGKLYTLWVGFAKFYEDAGQITDARLIFEKGMLADFKNVD
ELASLVCEYVEMELRHENYTEARKVLQKAVVPVAGIVDFYDSTEPVQNRLYKSLKVWALY
ADLEETFGTHMSCKSVYDRILDLKIANPQIVMNYATYLEELNYFEEAFKAYEKGIALFKW
PNVYEIWNTYLTKFIARYKGDKLERARDLFEQCLEKCPAKFAKPIYLMYAKLEEDFGQAR
HAMEVYDKATKGVLPEDQYEMYNMYIRRATDLYGLTHTRGIYHKAIEALTDDQAKDMSMR
FADLECKLGEIDRARAIYAHCSQMCDPRVAVDFWKTWKDFEIRHGNEDTLREMMRTKRSV
MAIFNTQVNFMSAQMLSAHAAKRAHEAESAVDDSMRSLEKKARELAEESKKDEVASSANM
AGLSKFVRGQATDDELGQLAETKNPDEIDIDDDNEDEEDITEEFELEKQTIPSEVFGKLL
PEND
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggaggacattatttttgaagaggaagacattccatatgaggaggaaatcttgagaaat
ccttacagtgtgaaatgttggttgaggtatatcgaacacaaaaaatctgcccccaatgac
gtcatcaacatgctgtacgaacgagccctcaaagaactacctggaagttataaaatctgg
catagttacctaaagttgagacttgttcagattaagggaatcaatatcaatagtaacatg
tataaagatctcaatagcacctttgaaagatcactcacattcatgcataagatgccacga
atttggttggagtacctacaattcctaattgaccagggcttcgtaaccacaacgagaaga
gcattcgatcgagccctgcgatccctacccatcacccaacaccagaggatatggaatctg
tatcttctcttcctcatgaagtatcctgatttgcaggaaactattgtcagatgctatcga
agatatcttaagttgatgccagaagattctgaagatttcattgactacttgaagtcagtt
gatcgactggacgaggcagccatcttgctggtcaaaatcatcaatgatgacaagttccaa
tcaaaatatggaaagtcaaagcatcagctgtggaatcagttatgtgatcttgtctcaaag
aatccgaccaaagtggtttctctgaaggttgagccgattgtgaggcagggaatcaagaaa
tacacagaccaagttggtatgctgtggaatgctctcgcagattattacgttagaagtcag
ctctttgaaagggctcgagatatctacgaagaagccatgttaagtgtcatgactgtcagg
gatttcacacaaattttcgatgcctacactcaatttgaggaccaaataatcagagcaaaa
atggaggcaactaattcactgggccccaccgaagatgatgacttggagttggaaatgcat
ctggctaggctggaagacctcatggaaaggaggcctttgttacttaatagcgtcttacta
aggcaaaaccctcacaatgtccatgaatggcacaagaggatcaaactctatgaaggaaaa
ccaaaagagattgtagagacgtacactgaggccgtggagatagtcgacccgaaacaggct
tctggaaaattgtacactttgtgggttggatttgccaaattctacgaggatgctggtcaa
attactgatgctcgtctgattttcgaaaaaggtatgctggcagactttaagaatgtcgat
gagctagcatcattggtttgtgagtatgttgaaatggaacttaggcacgaaaattatacg
gaggctcgtaaagttctccaaaaggctgtcgtacctgttgctggcattgtagacttctat
gattcgacggagccagtgcaaaatagactgtataaatcactgaaagtttgggcactgtat
gctgatctagaagaaacttttggaacacatatgtcttgcaagtcagtctatgataggata
ctcgatttaaagatagccaatccgcagatagttatgaactacgccacatatctagaggaa
ctcaactactttgaagaagctttcaaggcttacgaaaagggcatagcactatttaaatgg
cccaacgtgtatgagatttggaacacgtacctgacaaagttcatagcgcgttacaaaggt
gacaagctggagagggcacgtgatctctttgaacagtgcctcgaaaagtgccctgccaaa
ttcgctaaacctatctacctgatgtatgcaaaacttgaagaagattttgggcaggcccga
cacgccatggaggtgtacgacaaggctactaagggggtcctacctgaagatcaatacgag
atgtacaacatgtacattagaagagcgacggatttgtacggccttacacatacaaggggt
atttatcataaggctatcgaagcactcactgatgaccaggccaaggacatgagtatgagg
tttgccgacttggagtgcaagctcggtgagattgacagggcgcgagccatatatgcccac
tgctctcagatgtgtgatcccagggtggcagtcgacttctggaaaacctggaaggatttt
gagatccgtcatgggaatgaggacacattgagagagatgatgaggacgaagaggagcgtc
atggccatcttcaacacgcaggttaatttcatgtctgctcagatgctatctgctcatgct
gccaaacgagctcatgaagctgaaagtgcagtggatgacagcatgagatcgttggagaag
aaggcaagagaattagcggaggaatctaagaaggatgaagtagcatcttcagctaacatg
gctggactttccaaatttgtgagagggcaggcaactgatgacgaactcggacaactagct
gaaacaaaaaatccagacgagatagacatagatgacgacaatgaagatgaagaggatata
actgaagaatttgaacttgagaagcaaaccatccctagtgaggtgtttggaaaattattg
cctgaaaatgattga
DBGET
integrated database retrieval system