KEGG   Helobdella robusta: HELRODRAFT_100710
Entry
HELRODRAFT_100710 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
hro  Helobdella robusta
Pathway
hro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HELRODRAFT_100710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hro03019]
    HELRODRAFT_100710
   03041 Spliceosome [BR:hro03041]
    HELRODRAFT_100710
Messenger RNA biogenesis [BR:hro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     HELRODRAFT_100710
Spliceosome [BR:hro03041]
 Complex B
  Other components
   Prp19-related factors
    HELRODRAFT_100710
 Complex C
    HELRODRAFT_100710
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf NRDE-2 TPR_2 Mad3_BUB1_I_2 RPN7 DUF5575_C
Other DBs
NCBI-GeneID: 20194466
NCBI-ProteinID: XP_009020691
JGI: Helro1_100710
UniProt: T1ED14
LinkDB
Position
Unknown
AA seq 844 aa
MEDIIFEEEDIPYEEEILRNPYSVKCWLRYIEHKKSAPNDVINMLYERALKELPGSYKIW
HSYLKLRLVQIKGININSNMYKDLNSTFERSLTFMHKMPRIWLEYLQFLIDQGFVTTTRR
AFDRALRSLPITQHQRIWNLYLLFLMKYPDLQETIVRCYRRYLKLMPEDSEDFIDYLKSV
DRLDEAAILLVKIINDDKFQSKYGKSKHQLWNQLCDLVSKNPTKVVSLKVEPIVRQGIKK
YTDQVGMLWNALADYYVRSQLFERARDIYEEAMLSVMTVRDFTQIFDAYTQFEDQIIRAK
MEATNSLGPTEDDDLELEMHLARLEDLMERRPLLLNSVLLRQNPHNVHEWHKRIKLYEGK
PKEIVETYTEAVEIVDPKQASGKLYTLWVGFAKFYEDAGQITDARLIFEKGMLADFKNVD
ELASLVCEYVEMELRHENYTEARKVLQKAVVPVAGIVDFYDSTEPVQNRLYKSLKVWALY
ADLEETFGTHMSCKSVYDRILDLKIANPQIVMNYATYLEELNYFEEAFKAYEKGIALFKW
PNVYEIWNTYLTKFIARYKGDKLERARDLFEQCLEKCPAKFAKPIYLMYAKLEEDFGQAR
HAMEVYDKATKGVLPEDQYEMYNMYIRRATDLYGLTHTRGIYHKAIEALTDDQAKDMSMR
FADLECKLGEIDRARAIYAHCSQMCDPRVAVDFWKTWKDFEIRHGNEDTLREMMRTKRSV
MAIFNTQVNFMSAQMLSAHAAKRAHEAESAVDDSMRSLEKKARELAEESKKDEVASSANM
AGLSKFVRGQATDDELGQLAETKNPDEIDIDDDNEDEEDITEEFELEKQTIPSEVFGKLL
PEND
NT seq 2535 nt   +upstreamnt  +downstreamnt
atggaggacattatttttgaagaggaagacattccatatgaggaggaaatcttgagaaat
ccttacagtgtgaaatgttggttgaggtatatcgaacacaaaaaatctgcccccaatgac
gtcatcaacatgctgtacgaacgagccctcaaagaactacctggaagttataaaatctgg
catagttacctaaagttgagacttgttcagattaagggaatcaatatcaatagtaacatg
tataaagatctcaatagcacctttgaaagatcactcacattcatgcataagatgccacga
atttggttggagtacctacaattcctaattgaccagggcttcgtaaccacaacgagaaga
gcattcgatcgagccctgcgatccctacccatcacccaacaccagaggatatggaatctg
tatcttctcttcctcatgaagtatcctgatttgcaggaaactattgtcagatgctatcga
agatatcttaagttgatgccagaagattctgaagatttcattgactacttgaagtcagtt
gatcgactggacgaggcagccatcttgctggtcaaaatcatcaatgatgacaagttccaa
tcaaaatatggaaagtcaaagcatcagctgtggaatcagttatgtgatcttgtctcaaag
aatccgaccaaagtggtttctctgaaggttgagccgattgtgaggcagggaatcaagaaa
tacacagaccaagttggtatgctgtggaatgctctcgcagattattacgttagaagtcag
ctctttgaaagggctcgagatatctacgaagaagccatgttaagtgtcatgactgtcagg
gatttcacacaaattttcgatgcctacactcaatttgaggaccaaataatcagagcaaaa
atggaggcaactaattcactgggccccaccgaagatgatgacttggagttggaaatgcat
ctggctaggctggaagacctcatggaaaggaggcctttgttacttaatagcgtcttacta
aggcaaaaccctcacaatgtccatgaatggcacaagaggatcaaactctatgaaggaaaa
ccaaaagagattgtagagacgtacactgaggccgtggagatagtcgacccgaaacaggct
tctggaaaattgtacactttgtgggttggatttgccaaattctacgaggatgctggtcaa
attactgatgctcgtctgattttcgaaaaaggtatgctggcagactttaagaatgtcgat
gagctagcatcattggtttgtgagtatgttgaaatggaacttaggcacgaaaattatacg
gaggctcgtaaagttctccaaaaggctgtcgtacctgttgctggcattgtagacttctat
gattcgacggagccagtgcaaaatagactgtataaatcactgaaagtttgggcactgtat
gctgatctagaagaaacttttggaacacatatgtcttgcaagtcagtctatgataggata
ctcgatttaaagatagccaatccgcagatagttatgaactacgccacatatctagaggaa
ctcaactactttgaagaagctttcaaggcttacgaaaagggcatagcactatttaaatgg
cccaacgtgtatgagatttggaacacgtacctgacaaagttcatagcgcgttacaaaggt
gacaagctggagagggcacgtgatctctttgaacagtgcctcgaaaagtgccctgccaaa
ttcgctaaacctatctacctgatgtatgcaaaacttgaagaagattttgggcaggcccga
cacgccatggaggtgtacgacaaggctactaagggggtcctacctgaagatcaatacgag
atgtacaacatgtacattagaagagcgacggatttgtacggccttacacatacaaggggt
atttatcataaggctatcgaagcactcactgatgaccaggccaaggacatgagtatgagg
tttgccgacttggagtgcaagctcggtgagattgacagggcgcgagccatatatgcccac
tgctctcagatgtgtgatcccagggtggcagtcgacttctggaaaacctggaaggatttt
gagatccgtcatgggaatgaggacacattgagagagatgatgaggacgaagaggagcgtc
atggccatcttcaacacgcaggttaatttcatgtctgctcagatgctatctgctcatgct
gccaaacgagctcatgaagctgaaagtgcagtggatgacagcatgagatcgttggagaag
aaggcaagagaattagcggaggaatctaagaaggatgaagtagcatcttcagctaacatg
gctggactttccaaatttgtgagagggcaggcaactgatgacgaactcggacaactagct
gaaacaaaaaatccagacgagatagacatagatgacgacaatgaagatgaagaggatata
actgaagaatttgaacttgagaagcaaaccatccctagtgaggtgtttggaaaattattg
cctgaaaatgattga

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