Helobdella robusta: HELRODRAFT_101626
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Entry
HELRODRAFT_101626 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K13203
zinc finger RNA-binding protein
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_101626
Spliceosome [BR:
hro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
HELRODRAFT_101626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_C
zf-met
DZF_N
zf-C2H2_jaz
C2H2-zf_KIN17
KH_GLD-3_1st
Motif
Other DBs
NCBI-GeneID:
20194511
NCBI-ProteinID:
XP_009023403
JGI:
Helro1_101626
UniProt:
T1ED59
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MDPNAWNYGYYGGTLDHYNIYPTQYPPQALYPANYQQIPVAAPTPNYGPYGTLIASPVSQ
NVSAKGHMPTYSTDTAHLMKQQPLFKQDGSQKTVNHLKIETAVGPKEATTSTTTTGFTYK
GLDDAVYKAAKSYLAEKQHVGSKASGGGGGGVGGGNWSKERFRSGRGPVIDPNQWKYCEL
CKCTCAGELAYKAHIQGKAHKKKESQGNHALILSGSKGHMYCQLCDVSCSSSDAYASHIR
GAKHQKILRVQTKMGKNIPDEGTGTTAGSSSASAASSASPAKKVIVCPRINFVGGQTLNS
TMSSKSVTGAPSTTTTSADPIGPTAPPTYASAAAGFKRQGSPADEDSNETPVGLEYVLES
MNETNTAIQFYCKLCECSFSDPHAKYVHSKGRRHRLQYKKKVDPTLKVDSVPSYLDRLKG
QWKNKRKGGGGGMTTGGRGMIGRSDMYRQQAETLKYEKELLQWQLMKTATNSGGGMDAIG
GSDSVSGAGRLFPSTYQQHLATDVDSCFNLAFDNQHMVFKHNSIYPTEHELSAVQEFVST
CERSLKLVSDELNKLDNRRILKGVMRVGLLAKGLLIRDALQLELVILTSEKPTKKLLLFI
AENMPKLIATFSTEKYAVEISPDVTHLKIYVPTVEEDTEQEQEPTATTTTTNNNNNNIDN
NDNNNNDNSNDNNNNDNNNNNNVGAESNADSQGRDDTNLKRNDDATDNNNDDDDNNNDKD
GENYIDENGEEMQVIDTASGDDDGADANLEADYATEDADENYYNDDGEQEEYDDDGGGCD
GGDYDQMEGEEELADEGSEEMKEEVKKALRTIVCYIFVAPNISDNYKPAKTEKESTTDTK
ATTTSATTASTATTTTAASVTTLTTTAGTSFLPGLSTDVAVASDQTVDSTSSSSAGINDG
NDYIDEPVCAWALTELKRTKWFHNTMIMNEACTVLIRVLIDFCKRIPTWTPMGQWTLELL
VERCMSLDHNVSPAVGLRRVFEIVSSGIFLRDGWGLLDPLNRPTNRAEGSKDDLSNRVDA
SDHMCTQEKEDVTNSAQHALRLIAHGQIYKVLGISKLPPPAPRPLPSFHHQQDANRIPPL
MKRMRYM
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggatcctaatgcatggaattacggttactacggcggtacattggatcattacaacatt
tacccgacccagtatccaccccaagctctctatccggcgaattatcagcagatcccggtg
gcggcacccaccccaaactacggtccctatggaacgttgatcgctagtcctgtctcgcaa
aacgtatcggcaaaagggcatatgcctacgtacagcactgatactgctcacttgatgaag
cagcagccactttttaaacaagatggctcccagaagactgtcaatcatttaaaaattgag
acagcagttggtccaaaggaagcaactacatctactactacaacaggttttacttacaaa
ggtttggatgatgctgtgtacaaggctgcaaagagctatctggcagagaaacaacacgta
gggtcaaaggcatctgggggtggaggaggaggtgttggaggcggaaactggagtaaggaa
agatttagaagtgggaggggtccagtcatcgatcccaatcagtggaagtactgcgaactg
tgcaagtgcacatgcgctggagaactggcttacaaggcacacatacaaggaaaggcgcac
aaaaagaaggagagtcagggtaaccatgcactgatcctgtcagggtcaaaaggtcacatg
tactgtcagctctgtgatgttagttgttcgtcgtctgatgcgtatgcatcacatatcagg
ggggctaagcatcagaagattctacgagttcagacaaaaatgggcaagaacattccagat
gagggcactggcactactgcaggcagcagtagtgccagtgctgctagttctgcatctccc
gccaagaaagtcattgtctgtccccgcatcaattttgttggtggtcaaaccctcaattcg
acgatgtcatctaagtctgtgactggggcaccatctacgacgacgacatcagcagacccc
atagggcccactgcaccgccgacctacgcatcagctgctgcaggcttcaagaggcagggc
agtccagctgatgaggattccaatgaaactcctgttggcctggagtatgtactggagtca
atgaatgagacaaacactgccatccagttctactgcaagttgtgcgagtgctccttctcc
gatccacacgctaagtatgtccattcaaaaggacgtaggcaccgtctccaatacaagaaa
aaagttgaccccaccttgaaagttgacagcgtcccgagttacctggatagactgaaaggg
cagtggaagaataaaaggaagggaggaggtggaggaatgaccacggggggcagaggaatg
atagggcgtagtgatatgtacaggcagcaagcagaaaccttgaaatacgagaaggagcta
ctgcagtggcagttgatgaaaacagctaccaacagtggtggtggcatggacgctattgga
ggaagtgacagcgtgtcaggcgccggtcgcttattcccctcaacttatcagcagcatttg
gcgacagatgtcgacagttgcttcaatctggcgttcgataatcagcacatggtctttaaa
cataactctatatatccaactgaacatgagctgtcagcagtccaagaatttgtatccacg
tgtgagaggtccttgaagctggtgtcagatgaactcaataaactggacaatagaaggata
ttaaagggggtaatgagggtagggctgcttgccaagggacttttgatcagagacgccctt
caactggagctagtcatcttgacctctgagaagcctaccaaaaagttgcttctcttcata
gccgagaacatgccaaagctgatagccacattctctacagagaagtacgctgttgaaatc
tcgcctgacgtcacccacctcaagatttacgtaccgactgtcgaggaggacaccgaacaa
gaacaggaacccaccgcgacgacaacaacaacaaataataataacaacaacatcgataat
aatgataataataataatgacaatagtaatgacaataataataatgataataataataat
aataatgttggagctgagagtaatgctgattctcagggtagggatgataccaatctaaag
agaaacgacgatgccactgataataataatgatgatgatgataacaacaacgataaagat
ggcgagaattacatcgatgaaaatggcgaagagatgcaggtcatagatacggccagtggc
gatgacgatggcgcggatgctaacctcgaagccgactacgccactgaagatgctgacgaa
aattactacaacgacgatggcgaacaggaggagtatgatgatgatggtggtggctgtgat
ggtggtgattatgatcagatggagggggaggaggagttagctgatgaggggagtgaggag
atgaaggaagaggttaaaaaggcacttaggaccattgtctgttacatcttcgttgctccg
aacatcagcgacaactacaagccagctaaaacagaaaaagaatcaacaactgacacaaaa
gcaacaacaacctctgcaacaactgcgtctactgcaactacaacaacagcggcctcagtc
acaactctaacaacaacagcaggtacatcttttttgccaggattgtcaacagatgtggct
gtggccagtgaccagactgttgattcgacgtccagtagttcagctggaatcaatgatggc
aatgattatatcgacgagcctgtttgtgcctgggctctcaccgaactcaaaaggactaaa
tggttccataatacaatgataatgaacgaagcgtgtacagttctcattcgagttttgatc
gatttttgcaagaggattcctacctggactcccatgggacaatggacgctagagttgctg
gttgagaggtgcatgtcgctggatcacaatgtctcgcctgcagttggactgaggagggtg
tttgaaatcgtgtcatcgggcatcttcctacgggatgggtggggattgcttgacccactt
aatcgaccgaccaatcgtgctgaggggtcaaaagacgatctctccaatcgtgttgacgcg
tctgatcacatgtgcacacaggagaaggaggatgtcaccaacagtgcccagcatgctctc
aggctcattgctcatggacagatttacaaagttctgggcattagcaaacttccacctcct
gccccgagacctttgccatcattccatcatcaacaagatgccaatcgcataccaccactg
atgaagaggatgagatacatgtga
DBGET
integrated database retrieval system