Helobdella robusta: HELRODRAFT_102273
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Entry
HELRODRAFT_102273 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
hro
Helobdella robusta
Pathway
hro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HELRODRAFT_102273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_102273
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
HELRODRAFT_102273
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
HELRODRAFT_102273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
20194543
NCBI-ProteinID:
XP_009024896
JGI:
Helro1_102273
UniProt:
T1ED91
LinkDB
All DBs
Position
Unknown
AA seq
212 aa
AA seq
DB search
MTDTFKFVLPGEKICKFNDRLNLLEGVYVKDNVVRSSLAGRLVIEEVEDEDEDGNDDCDM
EKIKTIKKIIRVSSAKHGNFVPFIGALVSARVTRVTQRYCKCRITTVEKTKCREPFNGLL
RKEDVRDKERDKTDMFKCFRPGDYILARVISTNDTMHYLLSTAEGELGVVCAISEAGSLL
VPLSWTEMQCSSTNQKEHRKVARVQPQLLLVD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacggacacgttcaaatttgtgcttccaggcgagaagatttgtaaatttaatgacaga
ttaaatttgctagaaggagtttacgtgaaagacaacgtcgtccgaagcagcttggctggc
cgattagtgattgaggaagtggaggacgaggatgaagatggcaacgacgattgtgacatg
gaaaaaataaaaaccattaaaaaaataattagagtgtcgtctgccaagcacggaaacttt
gttccattcattggggctctagtctccgccagggtgaccagggtgacacaaagatactgc
aagtgcaggataacaaccgtcgagaagactaaatgtcgagaaccgttcaatggcctcctt
aggaaggaagatgtgagggataaagagagagataagaccgacatgttcaaatgcttcagg
cctggagattacatactggctcgtgtcatctcgacgaacgacaccatgcattatctgctc
tcaacagctgagggtgaactgggtgtcgtctgtgccatcagtgaagcaggcagtttattg
gttccattgagttggaccgagatgcaatgctcgtcgaccaatcagaaggaacataggaag
gtcgcccgtgttcaaccgcagctcttgcttgttgattga
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