Helobdella robusta: HELRODRAFT_102639
Help
Entry
HELRODRAFT_102639 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
hro
Helobdella robusta
Pathway
hro04120
Ubiquitin mediated proteolysis
hro04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HELRODRAFT_102639
04120 Ubiquitin mediated proteolysis
HELRODRAFT_102639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hro04121
]
HELRODRAFT_102639
Enzymes [BR:
hro01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
HELRODRAFT_102639
Ubiquitin system [BR:
hro04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
HELRODRAFT_102639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING_6
Prok-RING_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
20194559
NCBI-ProteinID:
XP_009026570
JGI:
Helro1_102639
UniProt:
T1EDA7
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MKEMLVGFLSAVLTAGVIFNAFNQKKQFYPSVVYITKSSPSMAILYAQALVLVVFLGKFM
RKVFFGQLRPAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTMLLFVKCFHWLAE
DRVDYFFNYQMERSPVISVLFHARAIALLALLTMVDLYFTNHAYHNTLIKGPSVQLVFGF
EYAILLTMVLHILIKYMLHTIDRQNENPWENKAVYLLYSELMLGFLKVVLYILFLIIMVK
VHTFPLFVVRPMYLTFREFKKAMNDVILSRRAIHNMNTLYPTATPEELASGDNVCIICRE
EMHSNAKKLPCNHIFHSNCLRSWFQRQQTCPTCRMDVFRNTPASTNNRQQAAVPQAAANA
QQPQAADNVQPQQPAPQQMPPNFPGFVPIFFPPQGLQPNPLPVSSSQSSSSSSSLSSSST
SSQQSSAAHTATTSAPGISSIPQPFSLPFIPSPHSFLYPSSSMMPPYSFPFGFPPTFGST
PSFQVPNLAQLTAFELQAMEGQERRNVEARIQCLRDIQTLLTAAVNQMQQYMSVVVATTA
ASHDPSPVSLDGGRSGSQSKDSKNDVLSNNVFSDVSAGGSSSRNTEIGVNGNSNVVINAT
SSHVAASNADGAGSSFLGTDEETATQENRDAGANVVRNLSEIGENLEGNKTNVVKEHQ
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagatgttggttggttttttgagtgctgtgttgacggcaggtgtcatatttaat
gcattcaatcaaaagaagcaattctatccatccgtcgtctacatcaccaagtcaagtcca
agtatggccattttatatgcccaagctttagtactggttgtcttcttgggaaaatttatg
agaaaagtcttttttggtcaacttaggccagctgagatggagcacttgattgagaggtca
tggtatgcagtcactgaaacatgcttagcattcacagtttttcgtgatgacttcagtcca
agatttgtggcacttttcacaatgttattatttgttaagtgtttccattggctggctgaa
gacagagttgattatttttttaattaccagatggaaagaagcccggtgatatcagttcta
ttccatgccagagccattgctctgttggcattgctgacaatggttgatctgtacttcacg
aaccatgcataccacaacactttgatcaagggtccctctgttcaactggtctttgggttt
gagtatgccattttgttgaccatggtactacacatcctgatcaagtacatgttacacaca
atcgatcgtcagaatgagaatccatgggagaacaaagcagtgtacctcttatattctgaa
cttatgctgggttttctcaaggtcgttctttacatcctgtttctaatcatcatggtgaag
gttcacacatttcctctgtttgtggtcaggcccatgtacctcacgtttagagaattcaag
aaagccatgaacgatgtcattctgtctagaagagcaatccataacatgaacacattatac
ccaacagcaacacccgaagaattggcttctggtgataatgtgtgcataatatgtcgtgaa
gaaatgcacagtaatgcaaagaaattgccatgcaaccacatttttcactccaactgcctg
agatcgtggttccaaagacaacagacctgcccaacttgcagaatggatgttttcagaaac
acaccggcatctactaacaacagacagcaggcagcagttccacaggcagcagccaatgcc
caacagccacaggctgctgacaatgttcaaccacagcagccagcaccacaacagatgcca
cctaattttcctggatttgtccccattttctttccacctcaaggcttgcaaccaaatcct
ttgcctgtctcaagttctcagtcatcgtcgtcttcatcatcgctttcatcatcgtcaaca
tcatctcaacaatcatcagctgctcacacagccaccacatcagctccaggaattagttcc
ataccacagccattttctcttccattcattccttctcctcactcattcctttacccttca
tccagcatgatgcctccgtatagttttccatttggttttccacctacctttggttccaca
ccatccttccaagttccaaacctggctcaattgaccgcctttgaacttcaagcaatggaa
gggcaagaaagaaggaatgtagaagcacgcatacagtgcttgagagatatacaaacgctc
cttacagcagcagtcaatcagatgcagcagtatatgagcgttgttgtagccaccacggca
gcctcacatgatccttccccggtcagcttagatggtggtagaagtggaagtcagagtaag
gactcaaaaaacgatgttcttagcaacaacgtttttagcgatgtcagtgctggtggtagt
agtagcagaaatactgaaattggtgtcaatggcaacagtaacgtagttatcaatgcaacg
agtagtcatgttgccgctagcaatgctgatggagctggcagcagctttctgggtactgat
gaagagactgcaacccaagagaatagagatgctggtgccaatgttgtcaggaatctttct
gagattggagaaaatttagaaggaaacaaaacaaatgtagtaaaagaacatcaataa
DBGET
integrated database retrieval system