Helobdella robusta: HELRODRAFT_103307
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Entry
HELRODRAFT_103307 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K08526
retinoid X receptor gamma
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hro03000
]
HELRODRAFT_103307
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hro03310
]
HELRODRAFT_103307
Transcription factors [BR:
hro03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
HELRODRAFT_103307
Nuclear receptors [BR:
hro03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
HELRODRAFT_103307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF7293
Motif
Other DBs
NCBI-GeneID:
20194607
NCBI-ProteinID:
XP_009028197
JGI:
Helro1_103307
UniProt:
T1EDF5
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MMMEATEEGEQNSIPSYSYQNEVRTEIVVDENMKIKLSSSSSSPPPPTTSATTTSATTTT
TNNELKFPKKSKNYVDKLLHFKQQQQQQSQQQKQPNPHGVFIDVNNAILQNIQIKSEPSR
ISYIVKTKSSSSSASNSTNNISKNINNNINSNDDDINKDENINNGIIIGSNNNDEAPHKQ
ILLQNYSKNDVSREHSVIELKETASPQLPSTPPTSSPHHHRHHSASSLSNHSINTSPSSM
IDVTTNINLQQLQQQMDSSNCLVCGDRGSGFHYSTFSCEGCKGFFKRTVQKSMVYACRES
GHCDVNKLTRNNCQYCRFQKCLEMGMKKEAVREDRTPGGRQKNTNLMNSVNKKLRVDGSD
GNDCRSSSSLSSSSSSTLHSPELDDLIKRLVDAQPHLSPSTQDLPSYKQQSLNSSTILEM
GNLMHFGYLELRLIIAWARKVPGFGKLSPVDQIALLKSSFMELNVLRLAFRSLDCDGCVR
FTEGLEIPLQKCSDVRLGKELVKLTLEFINRLRFTNIDSTEFAILCSIVLTYPDASGLAD
KRSVSSLQSRLLDCLQHYTNANYPSEPRRSCRLLLRLPSLRTISAHAAEMFLSLSLEGNV
KMNDLVLEIINKIG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggaggccacagaagagggagagcagaacagcatcccttcttattcttatcaa
aatgaggtgagaacagaaattgttgttgatgaaaacatgaaaatcaaattatcttcttcc
tcctcctcaccaccacctccaacaacatctgcaacaacaacatccgcaacaacaaccaca
acaaacaacgagttgaaatttcctaaaaaatccaaaaactatgttgacaagttgttacac
ttcaaacaacaacagcaacagcagtcacaacagcaaaagcaacccaatcctcatggagta
ttcattgatgttaataatgccatcttacagaatatacaaattaaatcagaacctagccgg
atatcctacattgtcaagactaagtcttcctcttcatcagcctctaacagcaccaacaac
atcagcaaaaacatcaacaacaacatcaacagtaatgatgatgacatcaacaaagatgaa
aacattaacaatggcattatcatcggcagtaataataatgatgaggcgcctcacaaacaa
attcttcttcaaaattattcaaaaaatgatgtttcgcgtgagcattcagttatagagttg
aaagagaccgcctcgccacagttgccatcaacaccaccaacatcatctccccatcatcat
cgtcatcactcagcatcatcgctatctaaccattccatcaacacttccccatcaagtatg
attgacgtcaccaccaacatcaacttacaacaactgcaacaacagatggactcatcaaat
tgtttagtttgtggagatcgagggtcaggctttcattattcaacattcagttgtgagggt
tgcaaaggttttttcaaaagaactgttcagaagtcgatggtgtatgcatgtcgagagtcg
gggcattgtgatgttaacaagttgacaagaaacaactgccaatactgtagatttcaaaag
tgcctcgagatggggatgaagaaggaagctgtccgagaagacaggacacctggcggtcga
cagaagaacacgaaccttatgaactctgtcaacaagaaacttcgtgttgatggtagcgat
ggtaatgattgcagatcatcatcgtcgttatcatcgtcctcgtcatctactctccactca
cccgaattggatgacctcataaaaagactcgtcgatgctcagccccatctttctccttcc
acgcaagatctgccatcatacaagcagcagtccctcaactcgtcgaccatactggaaatg
ggcaacctaatgcacttcggctacctggagttgaggctcatcattgcatgggcccgcaaa
gttcccggattcggtaaactgtcgccagtagatcaaattgctcttttgaaatcgtcattc
atggaactgaatgtactaagattggctttcagatctttagattgcgatgggtgtgtgcga
ttcacggagggcttggagataccactgcagaagtgttcggatgttcggttagggaaagag
ttagtgaagttgacactggagttcatcaacagacttcgattcacaaacatcgattccacg
gaattcgccattctttgctccatcgtcctcacctatccagacgccagcggcctagcagac
aaacgctcggtgagctcgctgcaatctcgcctgctggactgccttcagcactacacgaac
gccaactatccatcggaaccacgtcgttcctgtcgtctgctcttgaggctgccctcgctt
cgaaccatatccgctcatgccgccgaaatgttcctcagcctctccctcgaaggcaatgtc
aagatgaacgatctcgtcctcgagattatcaataagattggttga
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