KEGG   Helobdella robusta: HELRODRAFT_103772
Entry
HELRODRAFT_103772 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
hro  Helobdella robusta
Brite
KEGG Orthology (KO) [BR:hro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hro03036]
    HELRODRAFT_103772
Chromosome and associated proteins [BR:hro03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    HELRODRAFT_103772
   microRNA pathway
    RISC loading complex
     HELRODRAFT_103772
SSDB
Motif
Pfam: Dicer_platform Dicer_dsRBD Ribonuclease_3 Dicer_dimer Ribonucleas_3_3 PAZ Helicase_C CED4_WHD dsrm BUD22
Other DBs
NCBI-GeneID: 20194626
NCBI-ProteinID: XP_009029520
JGI: Helro1_103772
UniProt: T1EDH4
LinkDB
Position
Unknown
AA seq 1316 aa
MTSSEFQKHEEVLRKFRQQELNLLVTTNALQTGIDLPKCNLVVRFSPASSYKSYVQSKAR
ARSNIAKFVHLVDSHLKDQFGSDIKMYKGVEKILYHRCRHYRHNINRHIPNRDVISAKFP
PYIAPNCLTLPHPPKVTVLTAIKLVNKYCARLPSDNFTHLTPKCEITEHYYDKNVKMYKA
RLKLPINSSVKQTVEGPPMPDEQQAKMAVALEMCKVLHQSEELDDNLQPIGKEILPLKRS
RDSDEDDDDGGYEPGSTKRKQHYRKRVARALLGSVRPNAPCHLYAFNMTLTGPISEEQNT
RGRIIHAPEDTSKGFGVLVPRSLPKIPHFPVFTRSGEVTVSVDPMTPSNLHSDLHFDSDQ
LKRLYAFHKFLFSDVLKLEKCPMIFDPERAKSCCIVVPIDRGHSDEHHLAKQQSDHLVKQ
QDAGRLNAQQQLQEQQQNFKFRVEDFIDAVVTPSYRNVDQPQYFYVAEIRRDLSLTSPFP
SPELYETFRHYYSTKYNLHLTDHTQPLLDVDHTSARLNLLTPRYVNQKGVPLPTTSAENR
RAKRESLQQKQILVPELCYIHPFPASLWRKAVCVPTILYRVNYLLLAQELLERIAKEAGV
YACVRVCVCVRVCVCMCVTITNQPITPIKPNNHIDHLQINQSHQPTANQPIIHNPTNHKQ
GLSFKKNGNSQALQFRFAKDGEASSTFCGGCGFGDDDDNNDDDAAAATTTTATTNTAFTS
MYGPGACDVIQTLTMSNANDFFNLERLETIGDSFLKFAITAYLYCTYSGIHEGKLSYLRS
MQVSNYNLYRLGKRKGLPGLMLAAKFEPLENWLPPCYVLKRADPKSYIWNWKEQDGISQS
DKNRTDDDDDGVDDVCGGVGKRGDDNDEDEEEEEDDEDEADFFFINNVSDKDDDDEDEDA
YDDDDDDDGGDDFGGKTTSAAAAVACKNAAANNNNTTTTTTSSNNNNLLIPYNLQTQHSL
PDKSIADCIEALIGCYLACSGQNSALKLMLWMGLKVLPVSSSNDRSGDHSSDHSNDHSGS
SKDNFSNNANFLTSPPSPLLRHFEKSIGYKFKDRSYLLQAFTHASYHYNEVTDCYQRLEF
LGDAILDYVITKHLFKDSIEHSPGILTDLRSALVNNNIFALLAVKWNFHKFLKYIGPQLF
YVISRFVSWFNEQGEDAILDELEGESHNPLDADNDDEAQPPTNNRNNNNQPACELEDIEI
PKVLGDIFESVAGAIYLDANLSLDVVWKVYKRLMDKYITAFLEKIPKSPVRELLEAEPET
AKFEKPERTIDGRVRVCVNVVGKGSFRGIGRNYRIAKTAAAKRALKYIKMISGSSC
NT seq 3951 nt   +upstreamnt  +downstreamnt
atgacgtcgagtgaatttcagaagcacgaggaggtcttaaggaagtttaggcagcaagag
ttgaatcttctggtgactacgaatgccctgcagacgggcatcgatctacccaagtgcaat
ctagtcgttcggtttagtccggcttctagctacaaatcttatgtccagtctaaggccaga
gcgaggtcgaacatagcgaagtttgttcatctggttgacagccatttgaaggatcaattc
gggagtgatataaaaatgtataagggagtcgaaaagatactgtatcatcgctgccggcat
tatagacacaacatcaaccggcacattcctaatcgtgacgtcatcagcgccaagttcccg
ccttacatagcccccaactgcctaactttgcctcatccgcctaaggttacggtactgacg
gccatcaagttggtgaataaatattgcgccagactgccaagcgacaattttactcatttg
acgccaaaatgtgagatcaccgaacattattacgacaaaaatgttaaaatgtataaggcc
cgactcaaacttcctataaattcgtctgtaaagcagacagttgagggcccgccaatgcca
gacgagcagcaggccaaaatggcggttgcattggagatgtgtaaagttctccaccaatca
gaagaattggatgataatctccagccaataggaaaagagatcttgccactgaagagaagt
agagatagtgatgaggacgatgatgatggcggttatgagccaggctcaacaaaacgcaag
cagcactatcgcaaacgtgtggccagggcccttctgggctcggttcggcccaatgcgccc
tgccacctctacgccttcaacatgaccttgaccggaccgatttcagaggagcagaacacg
agaggcaggatcatacacgctcccgaagacaccagcaagggatttggagttcttgttcct
aggtccttgcccaagataccccactttccagtgtttacgaggtcaggagaggtcactgtg
tcagttgaccccatgaccccatctaacctacattccgaccttcatttcgattctgaccag
ttgaagaggctttatgcttttcataaatttttattctcagatgtattaaagttggaaaaa
tgccccatgatctttgacccagagagagcgaaatcatgctgcattgtggtgcccatcgat
agaggccactcagatgaacaccatctcgctaaacaacaatctgatcatttagtcaaacaa
caagatgctggacggctaaatgctcagcagcagctacaagaacaacagcaaaatttcaaa
tttagggtcgaagatttcatagatgctgtagttactccatcttataggaatgtcgaccag
ccacaatatttctatgtggctgaaataagacgtgacctctccctgaccagcccctttccc
tcccccgaactctacgagaccttccgccactactactccaccaagtacaacctccacctc
actgaccacacgcagccacttctcgacgtcgaccacaccagcgcccgtctcaaccttctc
acaccgagatacgtcaatcaaaaaggtgtccccctgccgactacaagcgctgaaaatcgt
cgcgcgaagcgcgagtcgctacagcagaagcagattctagttccggagttgtgctacatc
catccatttcccgccagtctctggcggaaggccgtctgcgtcccgaccattttgtatagg
gtgaactatttgctactggcgcaagaactacttgaaaggattgcaaaggaggctggtgtg
tatgcgtgtgtacgtgtgtgtgtgtgtgtacgtgtgtgtgtatgtatgtgtgtgaccatt
acaaaccagccgatcacaccaatcaaaccaaacaatcacatcgatcatttacaaatcaac
caatcacatcaaccaaccgcaaaccaaccaatcattcataacccgaccaatcacaaacaa
ggtctatccttcaagaagaatggaaattctcaagctctgcagtttcgttttgcaaaagat
ggcgaggcttcatcaacgttctgtggcggttgtggtttcggagatgacgacgacaacaat
gatgatgatgctgctgctgctactactaccactgctactactaacactgcttttacttcc
atgtatggtcctggagcttgcgacgtcatacaaacactgaccatgtccaacgctaatgac
ttttttaacctggaacgattagaaactattggcgactcgttcctcaagtttgccatcacg
gcctacctgtactgcacctactcgggcatccatgaaggaaagttgagttatctcaggagt
atgcaggttagtaattacaatctctaccgtctgggtaaacgcaagggactgccgggactg
atgttggccgcgaaattcgagcctctagaaaactggctaccaccctgttacgtcctaaag
agggccgaccctaaaagctatatttggaactggaaagaacaggacgggatttcccagagt
gataaaaatagaaccgatgatgatgatgatggtgtcgatgatgtttgtggtggcgttggc
aaacgtggtgatgataatgatgaagacgaagaggaagaagaggatgatgaggatgaagct
gatttctttttcattaataatgtctccgataaagatgatgatgacgaagatgaagatgcc
tatgatgatgatgatgatgatgatggtggtgatgattttggaggtaagacaacatcagca
gccgctgcagtagcctgcaaaaacgccgccgccaacaacaacaacacgacgacgaccaca
accagcagcaacaacaacaaccttttaatcccatacaacctgcaaacacaacatagccta
ccagacaagagtattgcagactgtatcgaggctctcataggatgctatcttgcgtgctcc
ggtcaaaactctgccctaaaactcatgctctggatggggttaaaggttttgccagtaagc
agtagtaacgaccgcagcggcgaccacagcagcgatcacagcaacgaccacagcggcagc
agcaaagataatttctcgaacaacgccaactttttaacatccccgccatcaccattgtta
cgtcacttcgaaaagtcaataggttacaagttcaaggacaggtcctacctgctgcaagca
ttcacacacgcttcctaccattacaatgaggtaaccgattgctaccaaagattagaattt
ctcggcgacgccatcttggattacgtcatcactaaacatctatttaaagattccatagaa
cattctcccggcatactaacggatctaagatcagccctagtgaacaacaacatcttcgcc
ctgttggctgtcaagtggaatttccacaaattcttaaaatacatcgggccacaactattt
tacgtcatcagcaggttcgtgtcatggttcaatgaacagggagaagatgccatcttggat
gagttggagggcgagtcgcacaacccactagacgcagacaacgacgacgaagcgcaaccg
ccgaccaacaatcgcaacaacaacaaccaaccagcctgcgaactcgaagatatcgaaata
ccgaaagtgctcggcgatatattcgaatctgtggccggtgccatctacctagacgccaat
ctctcgctggatgtcgtctggaaggtatacaagaggctcatggacaagtacatcactgct
ttcctcgaaaaaatcccaaaatccccagttagggaattattggaggctgaaccggaaacg
gctaaatttgaaaaaccggagcgaacaatagacggacgcgtgcgagtgtgcgtcaacgtc
gttggcaagggtagctttagaggcataggaaggaactacagaatcgccaaaacggccgct
gccaaaagagccctgaaatacatcaagatgatcagtggcagcagttgctga

DBGET integrated database retrieval system