Helobdella robusta: HELRODRAFT_103833
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Entry
HELRODRAFT_103833 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
hro
Helobdella robusta
Pathway
hro04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
HELRODRAFT_103833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hro04121
]
HELRODRAFT_103833
Enzymes [BR:
hro01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
HELRODRAFT_103833
Ubiquitin system [BR:
hro04121
]
Ubiquitin ligases (E3)
HECT type E3
HELRODRAFT_103833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_Maestro
UNC45-central
Motif
Other DBs
NCBI-GeneID:
20194629
NCBI-ProteinID:
XP_009029586
JGI:
Helro1_103833
UniProt:
T1EDH7
LinkDB
All DBs
Position
Unknown
AA seq
1714 aa
AA seq
DB search
MLEARGLPTHLFGALGSRMQQLLQRSMAGGPVHKAQQHLQAIQSKDSSQQLQGVIEMCQI
LVMGNEDTLAGFPIRQAVPTLAGLLRNPTNSSGLPMASSSNHDAPIGNFDLMHHACRALT
YMMEALPRSVGVVVEVVPAFLEKLQSIQCMDVAEQSLQALDMLSRKHHKAILHADGVSAC
LTFLDFFSITAQRTALSITANCCQNLTVEEFMFIKPSLSVLVNRLSQSDKKSLDSVCLSL
SRMVDSYQSETNILRDLAADKFFEYIIQLMMASPTIISSNMFVTVIHMLVVMATSCPDLA
VQLLKLNIADTLCHLLIGGSGHGASQNIELIPRTPQELYEIVCLIGELMPTLPTDGLFSV
NELLVKNAPQTDNGVVWQWWDDHGVWHSYSPADCRIIEAAFQFGEREVSLCIFGGNYSVD
FGTSQQINEDTGTARFVRRRVQASSSSTTTSQNAKRMIDSRWELLKSEPQIGDSFIKTLF
AVLYEVYNSSAGPSIRHKCLQAIMRLIYYANPEPLKTVLSFCNVPSHIASMMASNDLKVV
VCSVQMAHILMEKLPEVFSVQFCREGVMHQITKLCEVPSSSSSKVTKQHATAFAASITSN
VSSGTSNASSSSSSSAATSTLNNNNNVLLGRPSTSSPSSILLQQQQHPYLAPHLSYDALR
IAPPPQPYGATIISNHGKSQLNNSSNNNNSGGSNSGNSSDNKEKVKLWVAEQGLFVWVFP
SYENPAMHCLNMLVKANKMLKRQVSCSSELRALKQLATVMTTQDASPFEIIHSDVIDTLY
NYLSGKNPISDDEKNPEVDVGGGGKNSKSGGKNSGKGSKKGGCRKGKGKNSLNKLINRLM
ACLHHLEQFQVKVHDFPAGSNLSSRGGTNALRFFDTHQLKCNLQRHPSCTSLKQWRGGPV
KIDPLALIQAIEKYLVLRGYARIRMDDDDDDDDDDDDDDIDETLQAAAASAGQQQPQHSL
EFLINDRLVPYDMTVYEAVKHFSSLPPLGKAGSVNNSNINVVNNESETDTDLENPFGVAS
IWTSTHTIYFRPVSQQNPSSSSASLLSSNVDTVVGHSKKSKADKSKSKSTGKSAKDLKQY
RGNLILNSVTSNLTVNSANLTFNDPSLKIMPLLDLLHNVNKLWGLFFEKSDFNPLLKSQE
FLSSKLTSKANRQLQDPISVVTASLPAWLMQIAKSCPFLLPFETRQTLFYITTFDRERAM
FRLQREQNSASNDGGLGGGGGGSSEGHNRVTPRLERRKTTVSRDDILKQAEKLMTDMGSS
KALLEIQYENEVGTGLGPTLEFYALVSRELQRADLELWNGEAVSTSIQNQDSKQQQNDSD
PSSPGIASSKSTRHNQSPSVQQQSQHQYMFSPTGLFPQPLSKSAKVGQINKIRSKFKFLG
RLMAKALMDSRMLDLPLSKALYKWMLLTSSSSPSSVAAAPPQSSSSSSSSSSHSSSAHLA
PPASLLASPFPCHELSLEDLKDVQPTVFKFINQLIEVDKEKCRILSEHKLTSEVRKSRLD
ELKVDGVTFDDLCVNFCVPGCPDIEMKKGGKDIWLSHVNLTEYIKLSIHWLLVEGPAKQL
ESLREGFESVFPMNSLEFFYPEEMEMLFCGNQFEPWTPSYLSECCRADHGYNMESKQIRH
LFEVLHSFTQEEQRMFLQFTTGSPKLPVGGFKSLNPPLTIVRKSVEENEKADDYLPSVMT
CVNYLKLPEYSNAKVLKEKILLAIKEGQMSFHLS
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagccaggggcctgccaactcatttatttggggctttgggttcgagaatgcaa
caacttcttcaaagatctatggcaggtggcccagtccataaagctcagcagcacctacag
gccatacaatcaaaagattcgagtcagcagttgcaaggtgtcatcgagatgtgccagata
ttggtgatgggcaacgaagatacgctagctggttttcccattcgtcaagctgttcccacg
ctagccggcctacttagaaatccaaccaatagcagcggtctgcccatggcctcatcatcc
aatcacgatgctccaattggtaacttcgatcttatgcaccatgcctgtcgagctctgact
tatatgatggaggcactgccaaggtctgttggtgttgtcgttgaggtcgttccagccttt
ctggagaagctgcaatcgatccaatgcatggacgtggcagaacagtccttgcaggctctc
gacatgctatccaggaagcatcataaagccatactccacgctgacggcgtgtcggcatgt
ttaaccttcctggattttttctcgataactgcgcaaagaacggcattgtcgataacagct
aactgctgccaaaatcttacagtcgaggagttcatgtttatcaaaccgtctctttcggta
ttggtcaataggctcagccaatcggataaaaagtcattggacagtgtatgtttaagtttg
tcgcgaatggtcgacagctaccagtcagaaacgaacattctgagagacctagcagctgat
aagttctttgaatatattattcaactgatgatggccagccccacaatcataagtagcaac
atgtttgtcaccgtcatccacatgctggtcgtcatggcaaccagctgccctgatttagct
gttcagctgctcaagctaaatatagctgatacattatgccatttactgatcggtggctct
ggtcatggggcatctcagaatattgaactaattccaagaacaccacaagagttgtatgaa
attgtctgccttattggtgaattgatgccaaccctgccaactgatggtctcttctcagtt
aatgagttactcgtaaaaaatgcaccacagaccgacaacggtgtagtttggcaatggtgg
gatgatcatggcgtttggcactcttactcgccagctgactgtcgaattattgaggcagcc
tttcagttcggggagcgcgaggtttcactgtgcatttttggtgggaattattcagtagac
tttggtacgtcgcagcagattaatgaggacactggcacggcgaggtttgttaggaggagg
gtacaggcgagctcttcttccactactacctctcaaaatgccaagagaatgattgacagt
aggtgggagttgttaaaaagtgaacctcaaattggagactcgtttatcaaaactctcttt
gctgtcctctatgaagtctacaattcatctgctggtccgtcgattaggcacaaatgtttg
caggcaataatgagattgatatattatgctaatcctgagccattgaaaacagttctttca
ttctgtaatgtgcctagccatatagcctctatgatggcctccaatgatttgaaagttgtc
gtctgctctgtgcaaatggcccatatcctaatggagaagttgccagaagtctttagcgtt
cagttctgcagggaaggggtcatgcatcagataacgaagctgtgcgaggttccttcatcg
tcgtcatccaaagtcactaagcagcatgccactgcttttgctgcatccatcacaagtaat
gttagtagtggtacaagcaatgcatcgtcatcatcttcatcatcggctgcaacctccaca
ttaaacaacaacaacaacgtcctgttaggcaggccatcaacgtcatcgccatcatcaata
ctattgcagcagcagcagcatccttatctagctcctcacctgagttacgatgccctaagg
attgctccgcctccacagccatatggcgctactattattagcaatcatggaaaatcccag
ctcaataatagcagtaataataacaatagtggtggtagtaattctggaaattccagcgat
aacaaagagaaagtaaaactctgggttgctgaacaaggtttgtttgtttgggtttttcca
tcttatgagaacccagctatgcactgtctgaacatgttggttaaggctaataagatgttg
aaacgtcaggtcagttgctcatccgagctgagggccctgaaacaactggcgaccgtcatg
acgacgcaagacgcctcgccattcgaaattattcacagtgacgtcatcgacactctctat
aattatctttccgggaaaaacccaatttctgacgatgagaaaaacccggaggttgatgtc
ggcggtgggggaaaaaattcaaaatctggcgggaaaaattccggaaaaggcagcaagaaa
ggtggttgtaggaaaggcaaaggcaagaactctttgaataaactgatcaacagattgatg
gcctgtcttcatcatttggagcaattccaggtaaaagtgcacgactttccagccggctcc
aacttatcatctcgcggcggcactaacgctctcagattttttgatacgcatcagttgaag
tgcaatctccaacgtcacccttcctgcacatccctgaaacaatggcgggggggtccagtg
aagatcgacccactcgcactaattcaggccattgaaaagtatttggtactgagaggctat
gccaggattagaatggacgatgacgatgatgatgacgacgacgatgacgacgacgatatc
gacgaaacactgcaagcagctgcagctagtgctggtcagcaacagccacaacattctttg
gaatttttgattaacgacagactcgttccttacgacatgacagtctacgaagctgttaaa
cattttagttctctaccgccgctgggaaaagccggaagtgttaataatagtaacattaat
gttgtcaataacgaaagtgaaactgataccgatctggaaaacccgtttggagtggccagt
atctggaccagtacacatactatttatttcaggccggtgtctcaacagaacccatcgtcg
tcatcagcttcactcctgtcctcaaatgtggacactgtagtcgggcacagtaaaaagtcg
aaagccgacaaatctaaaagtaaatcaacgggaaaatctgccaaagatctcaagcagtat
cgtgggaacttgatattgaactccgtgacctcgaatttgaccgtgaactctgcaaacctg
accttcaatgatccttctttgaagattatgcccttacttgacctgcttcacaacgtcaac
aagctctgggggttgttttttgagaaatcagatttcaatccgctattaaagagtcaagaa
tttttgagtagcaagttgacatcaaaggcaaatcggcaattgcaagacccgatatccgta
gttactgcaagcttacctgcctggcttatgcaaattgctaagtcttgtccattcctactt
ccattcgagactcgacaaaccctcttttacataacgaccttcgaccgggagcgagccatg
ttcagacttcagagagaacagaacagtgccagcaacgacgggggcttgggtggcggaggt
gggggctctagcgaggggcacaatagggtcaccccgagacttgagaggaggaagacgaca
gtttctagagatgatatattgaagcaagcagaaaagctgatgacagacatgggttcctct
aaggctctcttggaaattcaatacgaaaacgaggtgggaacagggctaggccccacttta
gaattttatgcccttgtaagtagagagctacaaagggcagaccttgaactctggaatggc
gaggccgtttcaacatccattcagaatcaagattcgaaacaacagcaaaatgacagtgac
ccatcttcgccaggtatagcctcgtcaaaatccactcgtcacaatcagtccccatcagtg
caacaacaatctcaacaccagtacatgttcagtccgactggcctatttcctcagcctcta
tccaaatcggccaaagtaggtcagatcaacaagatcaggtcaaagttcaagttcttaggc
agactcatggctaaggcactgatggattctagaatgcttgatcttcctttgagtaaagcg
ctatataaatggatgttactaacctcctcatcgtcgccgtcgtcagtagcagcagcacca
ccgcagtcatcatcgtcgtcgtcgtcttcctcctcgcattcatcttcagcacacttagca
ccgccagcgtccttgttggcgtcaccgttcccgtgtcatgagttgagtttggaggatctg
aaagatgtccagccaaccgtattcaagtttatcaatcagctgattgaagttgataaggag
aagtgtagaattctctctgaacataaactgacatcagaagttcgaaaatctcgtctagac
gagttgaaagttgacggtgtgaccttcgatgacctctgcgtgaatttctgcgtgcccggc
tgtcccgacatcgagatgaagaagggtggcaaggatatctggctgtcacacgttaattta
actgaatatatcaagctctccattcattggctgttggttgaaggccctgcaaagcaactc
gagtcacttagggaaggctttgagtccgtttttccaatgaactctctggaatttttttat
ccagaagagatggagatgttgttttgtggcaaccaatttgagccgtggaccccgagctat
ctaagtgaatgctgtcgggctgatcacgggtacaacatggaatcaaaacagattaggcac
ctgtttgaggtcttgcactcgttcactcaagaagaacaaagaatgttcttgcagttcacc
actggttcacccaaattacctgttggcggcttcaagagcttaaatccgcccctaacaatc
gtccgcaaatcagtggaggaaaacgagaaagcagacgactacctgccatctgtcatgacc
tgcgtgaactatctcaaacttccggaatattctaacgctaaggttttaaaagaaaaaatc
ctattggctatcaaagaagggcagatgtctttccacctctcttga
DBGET
integrated database retrieval system
