Helobdella robusta: HELRODRAFT_103911
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Entry
HELRODRAFT_103911 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
hro
Helobdella robusta
Pathway
hro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HELRODRAFT_103911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_103911
Spliceosome [BR:
hro03041
]
Common components
Common spliceosomal components
SR proteins
HELRODRAFT_103911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
20194635
NCBI-ProteinID:
XP_009029707
JGI:
Helro1_103911
UniProt:
T1EDI3
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MARLYIGKLPSSARERDLEKFFKGYGRIREVLLKVGYGFVEFDDERDADDACYDLNGKTL
LGEKLVIEHAKTPSEKARSARERDYYRGRFVHDVRFGSRYRGPPVRTDHRVRIENVSSRT
SWQDLKSYLNTAGEVTFADCHKDRENEGIAEFATRGDMKNAITKLDKSELHGRRIRLYED
SRSNRRRGRSSSRSRRRSRSRRRSSSRRRSRSRSRKSRSRSKKSRSRSGSKKSRSRSGSK
KSKSRSRSVKKSRSRSVSNKRSRSGSRKRSRSRSRSGGRRADSSRRRDDSRGRDRRRDSR
DNSRSRDRREDKSRSRDRRDDGSRGRDRRDGSRDRRDESRSKRRDSRSRSKSPERRESHS
RSRSREDANGRKNCVSKSRSREGDKSKDATQDERSKSRDKPAHDSRSPSRERVRHDDHED
DDDKDKSMDVDRRSHSRSPTPPPKQKHESSYSRSPERRSRSKSKDIDDKISGKIMNGRPS
VPSEDASQPKGKGRMDSSSRSRSRSKDDEPKKFAPVIRKEEEEEEDARMSRSPSPEQRKV
TKEDKKAKDSNDEEEEEEEKSRQSRSKDRKKNKKRGKHGSESPAKSKKEKKKKKGSRSRS
SSKHKKSKKSKKKSSKRKPSASSGDSRSRSPPGKNGADSGRKSRKDSAGGEDDEKTSKKS
TATAAAAKSRSPSSSEERASLKKKDGKKLSEVVSTSRKRSASSRSSASPPKKRKSEESSP
EPQKRRRSRSNSSDSSGDERSSNKKKPSRGEAKDSKKKKRRADSSDHSD
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtctttatattggaaagctgccaagctcagccagggaaagagatttggagaag
ttcttcaaggggtatggtagaatcagggaggtgctcctcaaagtcggatatggatttgtg
gaattcgatgatgaacgtgatgcggacgatgcttgttatgacctcaatggcaagacactg
cttggggagaaattagtaatcgagcatgcaaagacacccagtgagaaagccaggtcagca
agagagagagactattacagaggaaggtttgtacatgatgttagatttggaagtcgctat
cgtggtccaccggttaggactgatcacagagtcaggattgagaatgtctcatctaggact
agttggcaggatctaaaaagctacttgaacacagctggagaggtgacatttgctgattgc
cacaaagatagagagaatgaagggatagctgagtttgccactcgtggagacatgaagaat
gccatcaccaaattggacaaaagtgaacttcacggccgaagaattcgtctgtatgaagat
tctagaagcaacagaagaagaggacgtagttcctcgagaagcagaaggcgcagtcgtagc
agacgccgttcttctagcagaagaaggtcaagatcaaggtccagaaaatctaggtcgaga
tcaaagaaatctaggtcgagatctggatctaagaaatctaggtcgagatctggctctaag
aaatcaaaatcgcgatctaggtctgtcaaaaaatctcgatctagatcagtctcaaacaag
agatccagatccgggtcaaggaaaaggtcacgaagcaggtcaagaagtggaggtcgtcga
gctgacagcagtcgaagaagagatgatagtaggggtagagatagacgaagagacagtcgt
gataatagcagaagcagagacaggagagaggataagagtcgtagtcgcgatcgtcgtgac
gatggaagtcgtggcagagatcgtagagatggaagtcgagatagaagggatgagagcaga
agcaaaaggagggatagcagatctagatcaaagagccctgaacgccgtgaaagccacagt
cgcagtagaagcagagaggatgccaacggcagaaaaaattgcgtctccaagtcgagaagt
agggaaggtgataaatcgaaagatgctactcaagatgaaagaagcaagagcagagacaaa
ccagcccatgacagcagaagtccaagcagagagagagtccgtcatgacgatcacgaagat
gacgacgataaagataagtccatggatgtcgatagacggtctcacagtagaagccccacg
ccccctcctaaacagaaacacgaaagcagctacagcagaagtccagagaggagaagtaga
tcaaagagtaaagacatagatgataaaatttcaggcaaaatcatgaatggccgaccgagt
gtcccaagcgaagatgcatcccagccaaagggaaagggacgtatggatagcagtagtcgt
agtagatcaagaagcaaagatgatgaacctaaaaaatttgctcctgtcattaggaaggag
gaggaagaggaggaagatgccaggatgagtaggtctccgagtcctgaacagaggaaggtt
acaaaagaagacaaaaaagccaaagactcgaatgatgaggaggaggaagaagaagagaaa
agtcgccaaagtcgtagcaaagacagaaagaagaacaaaaaaagaggaaagcacggatct
gagagtcctgcaaagtctaaaaaagagaagaagaagaagaagggaagtcgtagtcgcagc
tcgagcaagcacaagaagtcaaagaagagtaagaagaagtcgtcaaagagaaagccatct
gcaagttctggagattcaaggagtaggagtcctccgggaaaaaatggcgcagattctgga
agaaaaagtaggaaagattcagctggtggtgaagatgacgaaaaaacttcaaagaaatcg
acagcaacagcagccgctgcaaagtcaagatctccatccagcagtgaagagagagcatct
ctgaagaaaaaagatggcaagaaattgagtgaagttgtctcaacatcgagaaagagatcg
gccagtagtcgatcgtctgcaagtcctccaaagaagagaaaatcggaagaaagtagtcct
gaacctcaaaagagacgtagatcgagatcaaactcgtctgattcctctggcgacgaacga
tcaagtaataagaaaaaaccgtccagaggcgaggcaaaggatagcaaaaagaaaaagaga
agggcagatagcagcgatcattcagattaa
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