Helobdella robusta: HELRODRAFT_105454
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Entry
HELRODRAFT_105454 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K19527
vacuolar protein sorting-associated protein 13D
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hro04131
]
HELRODRAFT_105454
Membrane trafficking [BR:
hro04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
HELRODRAFT_105454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_VAB
VPS13_M
UBA_7
PH_PLEKHM2
SIN1_PH
Motif
Other DBs
NCBI-GeneID:
20194751
NCBI-ProteinID:
XP_009009360
JGI:
Helro1_105454
UniProt:
T1EDU9
LinkDB
All DBs
Position
Unknown
AA seq
2162 aa
AA seq
DB search
MSIKACLSSVQMTVDPQQYKLVRGLLAHNFGEQLDDFSPQFLSHMKDPRTHSVLAEEPYV
SLTIDLDLENDHDDMHCDAKNKQSAETSLAIVDLIKSSFHFVTRSDQSKDIGLVCHEINC
IDSRYLGRLDDPVNVRPNVFSNILRASPDSETKGETLRFECRCRMNRDSEKYHILLNNIR
MMGIFDWLLATKNFLQLSPEDPFQQGNVRDEKERKDREARYGSTQSGSIITKRISVMEED
KQRKLEVTLNMCDTELVVVEDAGDRDTNAVIIKGTTVIVCKPQSDRPLSCSLQNMEVFSC
CLAAEDETALSIIDPMLLTLELNTNNNTIDKTTSMQSSGLLEATKKLQSVRPVLEISFQT
LNIRLSYNDIKLFTSIINSMPHQVSQASKANKKANIGISGDLQSAYGNHFAFTSESSMCK
LQSLGFSEQDSMDALKRFQGRLDEAVMWLSGHTSPVVKTDDDDDNDNNEEYKPIFSDISG
FELKEGTIQICLIDDCLDADVPLVELTIYNIYVLHNFLPHPQGKARIKLYGDYYNRALSG
WEPFLEKWGCKLEWQKGVVEDEGNMYIDVKAANPSEIVNLNVTRTLLDLYTKTKLKWMED
YNNSSGQYNSRRRVPFIPFTLRNQVGCDVMFSVFTSSPSRYHQSIRSFSIEVLVNCGNFT
WVNDAHRYICTCVVWKRASDSSEVSFLVAERNKIRHKDSHGLQVNQIAIKVEGWKEISPV
SIDKVGTFFRHASSDIDNTSKIVSFAIFVIQQPFVLKFQTWPHARLVFDVSIEGSARKVI
RVRSAILINNQLDEPIEVKLESQTNGTYLAPTLVNPFSKSPVPLHFVFSKIWIRPLRSMM
DWCRDAIIWQSFTNHSDKKNNSLNSCASLGTGQDFFKFCVCIERQAYPPDELFNRNVSQS
PTSSHSRFPPPGHMISICPPMRVENLLPVDLNCSLKHIGSSWLPQMSIKPGKMVYLMEID
LSKDIGFTMTLENFTKCQDLTIPVGTVDNKVSLTLCDVMDRPLSLGIKVKAGLAGGLKVT
ISSPYWLVNKSGLPLIFKQHEASMAAGQFDEHELARSVSPLLFSFTDKTLYELCTMRLGN
SVHPEGKTPSCPRFMLERGVTVRQVRVAQLDRPDWVYNIGIEVKQGKGRYSDTNICTFSP
RYQLDNRTTYKLAYAQRHQTMKQDATSNYLCALSNCVLPFHWSRVDFDTLLCVRVMEEPR
CHWSGGFQIDKVDSFHINMRTDTNQCCFIHVDVVLVGAAFFVIFTNADSMPAPYRIDNFS
EVPVLFHQSRVDNQRLQICVKPKTSIPYAWDEPTMAGHITLRVPSGTSASYDMKKMGDAE
KLCYENFIYIAFTQTFKKGWSFHRSSTIPSPSYHQKSFDPELVLDVVSPGMVVLKKKEAG
KRSQLWRMTSKGLLEHEGSSAPRDPAFKKSSSSFSSSSSFSSLSTTPSTVYVLDIKDIAL
QPSKEMPLTIRKPDEKRISTQTWKFIDGHLCCGDRRSLCVQPKDGVYGLRDGTQAILAPI
SQSASSSAKSPSSSSSSNVQPHVRIHREKLQPGSGFLCVKVLNDGPTRVLQVTDVMHENY
ESKAVDGWVFVQGRKERQSIKSQTSVNAGKPQDQSFFSNQKFEVSMRLPGLGVSLVDETP
QELLYLFMSDAHLECSLCKSDQILQIDIRKIQIDNQLFDTPRPVLLYATPSNKRDSETDS
KPQLHICIHKVSSHQWDAQIFKQFLVSMKPINVQVEEVLMWRLINFFRINQQEVDIENIS
ESHINSSRSGIVAILPEFKRYYFGMIRIFQCFITLSVLTANDLPPDLKIIKKSLRIPLIR
FEDAQIELDTFTKYHLFETLTFLLESIRHHYTNEILGQAARILGSVDFLGNPLGLFSDMA
EGVQCLLELNVGGMLKNVTKGATNSVAKMSSTLSDTVGKATLDERHQVERQQILQKYKEG
GSDHLIAGLSSLWHGLRGAVVSIPSQAYLGASEKGIAGFASGMVKGVVGTITKPVAGVLD
FTSGTAHAIRDSSKGNFHKRPSRVREPRCCYGQCGLLPPYSAYHAEAQEFLFQQNHNVYD
EIFIARYELQVGHESESVHVLISNKKIYFMKKGNSIILQVSYENFIGCQWTNKENKCYIQ
VIMKDDSSNLLLTGDAKKSPLVRCDSESIAEEVVQHIRYAKNLHDEIKQTLPVNQNPNND
YD
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaaagcctgtttgtcttccgttcaaatgactgttgatccacagcagtacaag
ctcgttagaggattgctggctcacaattttggtgaacagttggatgacttcagcccacaa
tttttatcccatatgaaagatccaagaactcactctgtgttggcagaggaaccgtacgtg
agccttactattgatttggatttggagaatgatcatgatgacatgcattgtgacgcaaaa
aacaaacaatcagctgaaacatctctggccatcgtggaccttattaaatcaagttttcac
tttgtcactcggtccgatcaatcgaaagacattggtctcgtgtgtcatgagatcaactgc
attgacagcagatatctaggtagattagatgatccagtgaatgtgagaccaaacgtcttc
tcgaacatccttcgagcctctcccgattcggaaacgaaaggcgagacgttgaggtttgaa
tgcagatgtaggatgaacagagattcagaaaaatatcacatccttctaaacaacattcgc
atgatgggcatatttgattggctgcttgccactaaaaatttcttgcagctatcgcctgaa
gatcctttccaacaaggtaatgttagagatgaaaaagagaggaaggacagagaggcgaga
tacggttcaactcaaagtgggagtatcataactaagaggatcagtgtcatggaagaagat
aagcaaagaaagttggaagtgacgttgaacatgtgcgacacagaacttgtcgttgtggaa
gacgctggcgacagagacacaaatgccgtcataataaaaggtacgacagtgattgtttgc
aaacctcagtccgatcgacccctgtcctgcagtctgcagaacatggaagtgttctcttgc
tgcctggctgccgaagatgaaacagccctatccatcattgatcctatgttgttaaccctg
gaactcaatacgaacaacaacaccatcgacaagaccaccagcatgcagtcatccggattg
ttggaagccaccaagaagcttcagtccgtcagacccgttttagagataagcttccaaacg
ttaaacattcgtctttcatacaatgacatcaagttgtttacatccatcatcaactccatg
ccgcatcaagtctctcaggcttccaaagccaacaaaaaagccaacattggcatttcaggg
gatcttcaatctgcttacggtaatcactttgcatttacttcagagtcgtccatgtgcaaa
cttcaaagtttgggattttctgagcaggacagtatggatgccttgaagagattccagggc
aggttggatgaggctgttatgtggctgtcgggtcacacatctcctgtcgtcaagactgat
gatgatgatgataatgataacaatgaggagtacaaaccaattttctctgatatatctggc
tttgagttgaaggagggtacaatacagatctgcttgatcgatgattgcttggatgccgat
gttccgctggttgagctaaccatctacaatatttatgttctccacaacttcctgccacat
ccgcaaggaaaagccaggataaagttgtacggagattattacaacagggctctttccggg
tgggagccattcctagaaaagtgggggtgcaaattggaatggcagaagggtgtggttgaa
gatgaaggaaacatgtatattgatgtcaaagctgccaatccatctgaaatcgtcaatctg
aatgtcacacgaacattgttggacctctacactaagacgaagctgaagtggatggaggac
tacaacaacagcagcggtcagtacaattcgagacgtcgagtgcctttcattccgttcacc
ctccgcaatcaggtcgggtgtgacgtcatgttctccgtcttcacatcttcaccgtcgagg
taccaccaatctattcgcagtttttctattgaagtactggtaaattgcggaaattttaca
tgggtcaatgatgcacatcgttatatatgcacatgcgtcgtttggaagagagcatcggac
agtagtgaagtctctttccttgtggctgaaaggaacaaaatacgacataaagattcgcat
ggcctgcaagtcaatcagatagcaataaaagtggaaggctggaaggagatctcaccagtc
tccattgacaaagttggcacgttcttcagacacgcatcgtctgacatcgacaacacatcg
aaaatcgtgagtttcgccatatttgtcattcaacaaccttttgtattaaagtttcagaca
tggccccacgctcgtttggtgtttgacgtttcaatagaaggaagtgccaggaaagttatt
agagtcaggtcggctatccttatcaacaatcaactagatgagcctattgaagtcaaactg
gaaagccaaacaaatggtacctatttggcacctacattggtgaacccattcagcaagagt
cctgtgccactgcattttgtcttctcaaaaatctggatcagaccgctgaggtccatgatg
gactggtgcagagatgcaatcatttggcagtccttcacgaaccattctgacaagaagaac
aactcgctaaactcgtgtgcgtcacttggtactggacaggattttttcaagttttgtgta
tgcatcgaaagacaggcctacccacctgatgagctgttcaacaggaatgtttctcagtct
cccacatcatctcattctagattcccgccacccggtcacatgatcagcatctgccctcca
atgagagttgagaatttgttgcccgttgatttaaactgctcactaaagcacattggatcg
tcctggctgccacaaatgtcaatcaaacctggcaagatggtttatttgatggagattgac
ctcagcaaggacattggattcacgatgaccctggagaacttcacgaaatgtcaggacctc
acaattcctgtgggcactgtggacaacaaagtttcgttgacactctgtgacgtcatggac
aggcccttgtcacttggcatcaaggtgaaggctggcttggctggcggtttgaaggtgacg
atttcatcgccctactggctggtcaacaaatcaggacttccgctgatatttaaacaacac
gaagccagcatggcggcaggtcagtttgacgagcacgaactcgccagaagtgtcagccca
cttctcttctccttcactgataagactctctatgaactatgtaccatgaggttgggtaat
tcggttcatccagaaggaaaaaccccatcgtgtccaagattcatgttagagcgaggagtt
accgtcaggcaagttcgagttgctcagctcgatcgacccgattgggtgtacaacatcggc
atagaggtgaaacaggggaagggcagatactcagacacaaacatctgcactttttctccg
aggtatcaactggacaacaggacgacttacaagctggcgtacgctcagaggcaccaaacc
atgaaacaagacgcaacatctaactacctgtgtgccctctccaattgtgtcctgcctttc
cactggtcacgtgttgatttcgacacgttgttgtgtgtgagggtgatggaagagcccagg
tgtcactggtcgggcggcttccagattgataaagtcgattctttccacatcaatatgagg
acggatacaaatcaatgctgcttcattcacgtagacgtcgtgttagttggagcggcattc
tttgtcatcttcactaatgctgactccatgcctgcaccttatcgcatcgacaacttttct
gaagtgcctgttttgtttcatcaaagtagagttgacaatcaacgacttcaaatctgtgtc
aagccaaaaacatcaataccttatgcctgggacgagccgaccatggcgggccacataacg
ttgagggtgcctagcggcaccagcgcatcgtacgacatgaagaagatgggcgatgctgag
aaactctgctatgaaaacttcatctacattgccttcactcagactttcaaaaaaggttgg
tcgttccaccgatcatccaccattccatcgccgtcgtatcatcaaaaatccttcgatccg
gagttagtactggatgttgtatctcccggaatggttgtcctcaaaaagaaagaggcaggc
aaacgttctcaactgtggaggatgaccagcaagggtctactggagcacgaaggatcatct
gctcctcgggatccggcttttaaaaaatcttcatcttccttctcttcttcctcttcattc
tcatccctctccacgactcccagcaccgtctatgtcctcgacataaaggacatcgcactg
cagcccagcaaggaaatgccactcaccattcgcaaacctgacgagaagagaatttcaacg
caaacatggaagttcatcgacggtcacttgtgctgtggggataggaggagtttatgcgtg
caaccgaaagatggtgtttatggattgagagatggcactcaggcaatactggcgccgata
tctcagtcagcatcatcgtcagctaaatcgccttcctcatcgtcgtcgtctaatgtgcag
cctcacgtgcgcatacacagagagaagcttcaaccaggttcagggttcttgtgcgtgaaa
gttctcaacgacggtcctaccagggtgcttcaagttactgacgtcatgcacgagaactac
gagagcaaggccgtcgatggctgggtcttcgtacagggtcgcaaggagcggcagtccatc
aagagtcagacgtctgttaatgctggcaaacctcaagatcaatcttttttcagcaatcaa
aaatttgaggtttcgatgaggttaccggggctgggagtttctctggttgatgagactccg
caagaacttctctacctcttcatgagtgacgcccacctcgaatgttccctttgcaagtcc
gatcagatccttcagattgatatcaggaaaattcagatagacaaccagctgttcgacacg
ccccgacccgtcttgttgtacgccaccccatccaacaagagagactcagagacggacagc
aagccacagttgcacatctgcatacacaaagtttccagtcatcagtgggatgctcaaata
ttcaagcaattcctggtgtcgatgaaaccgatcaacgtgcaagttgaagaggtgctcatg
tggagactgatcaacttcttccgcatcaaccaacaggaagttgacattgagaatatcagt
gagagccacattaactcttccaggtctggaatcgtagcgatattgccggagtttaagaga
tactacttcgggatgataagaatttttcagtgtttcatcactctcagcgttctaactgca
aacgaccttcctcctgatcttaaaatcatcaaaaaatcactccgaatccctctcataaga
ttcgaggatgcgcagattgaattagatacgttcacaaaataccacctctttgaaacgctt
accttcttgcttgagtcgatccgtcatcactacacaaatgaaatcttgggtcaggcagcc
aggattcttggctccgttgattttcttggaaatcctctgggactctttagtgacatggct
gagggtgtccagtgtttgctggaattgaatgttggtggcatgttgaaaaacgtcaccaag
ggggcaactaattccgttgctaagatgagtagcacattatcggacacggttggaaaggca
acattggacgagaggcaccaagttgagaggcaacagattcttcagaagtacaaggagggt
ggttctgaccatctcattgcaggtctcagcagtctctggcacggattgagaggagctgtt
gtatccattccatctcaagcctaccttggagcatctgaaaaaggaattgctgggtttgca
agcggcatggtaaagggtgtggtaggaaccatcacaaagcccgtagcaggtgtgctggat
ttcacgtcgggcactgctcacgctataagggattcaagcaagggaaattttcataaaagg
ccttccagagtcagagaaccgagatgttgctatggacagtgcggactgttacctccatat
tctgcttatcatgctgaagcccaggagtttctatttcaacagaaccacaacgtctacgat
gaaatattcatagctaggtacgaactccaagttggacatgagagtgaaagtgtgcacgtg
ctcatatcaaacaagaagatatactttatgaagaagggaaacagcatcattcttcaagtg
tcttacgaaaatttcataggctgccaatggaccaacaaagaaaacaagtgttacattcaa
gttataatgaaggatgattcaagcaacctcctgctgacgggtgatgcgaagaaaagtcct
ttggtcaggtgtgactcggaaagcattgctgaagaagtcgtgcaacacattcgttacgcc
aagaacttgcacgatgaaataaaacaaactctacctgtcaatcaaaatccaaacaacgat
tacgactga
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