Helobdella robusta: HELRODRAFT_105484
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Entry
HELRODRAFT_105484 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hro
Helobdella robusta
Pathway
hro03022
Basal transcription factors
hro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HELRODRAFT_105484
09124 Replication and repair
03420 Nucleotide excision repair
HELRODRAFT_105484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hro03021
]
HELRODRAFT_105484
03036 Chromosome and associated proteins [BR:
hro03036
]
HELRODRAFT_105484
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_105484
Enzymes [BR:
hro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HELRODRAFT_105484
Transcription machinery [BR:
hro03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HELRODRAFT_105484
Chromosome and associated proteins [BR:
hro03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HELRODRAFT_105484
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HELRODRAFT_105484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
DUF365
T4SS_Ceg19
nSTAND3
YuaE
DUF3959
Motif
Other DBs
NCBI-GeneID:
20194757
NCBI-ProteinID:
XP_009009421
JGI:
Helro1_105484
UniProt:
T1EDV5
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MKLNIDGLTVYFPYEYIYPEQYLYMLELKKAIDAQGHCVLEMPSGTGKTISLLSLIVAYL
KAYPTQLTKLIYCSRTVPELQKVMEELEHLFDYWQEVTGQPLGLLGISLSSRKNLCIHPA
VSQERDGKVVDGRCHGLTASFVREQHKSNPSIPVCNFFEQYDAQGKDVIIPAGVYNLEAL
KAYGLDRGWCPYFLARHSITHANIIVYSYYYLLDPKIADLVSKELGKSSVVVFDEAHNID
NVCIESMSLHISRKTLDKCSLNLDSLKENIQRIKDEDASKLQKEYNRLVEGLKEANIARE
TDVIMANPILPDEVLQESVPGNIRNCEHFIIFMKRFVEYLKSRSHIQHFIQESPASFLKD
CLQKVCIERKPLRFCCERLRSLLRTLELSDIQDYSALTLVANFATMISTYTKGFTLIIEP
YDDRTPTISNPLMHFSCMNASIAIKPVFDRFQTVVITSGTLSPVEMYPRILDFHPVTMAS
FTMSLSRPCICPMVVTRGSDQVSVSSKFESREDPAVIRNYGLLLAEMASVVADGIVCFFT
SYVYMESIIAAWYDQGLIDQVQKYKLLFIETTDAAETSLALANYQKACENGRGAVLLSVA
RGKVSEGIDFDHHYGRAVIMFGVPYVYTQSRILKARLEYLREQFHIRENDFLTFDAMRHA
AQCVGRALRGKTDYGVMVFADKRFARTDKKNKLPKWIQEYLSDSVCNLSTDDAVQLTKRF
LRTMAQPFSREDQLGHSLLTLEQLMSEDVQQQLERKVHLIV
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaacattgatgggctaacagtgtactttccatatgagtacatctacccagaa
caatatctctatatgcttgaacttaaaaaagccattgatgcccagggtcattgtgttctt
gaaatgccaagtggtaccggcaaaacgatatctctgctgtcactgattgtcgcttatctt
aaagcctaccctacacagttaacaaaattgatctactgttctaggactgtgcccgagctg
cagaaggtgatggaggagctggagcacttgtttgactactggcaggaggtgacggggcag
ccacttggtttgctcggcatatctctcagttctagaaaaaatctctgcatacatcctgcc
gtgagccaggagagagatggcaaggtggtcgatggcaggtgccatggtctgaccgcctcg
ttcgtcagggaacagcacaaatccaacccttctattcctgtctgcaatttttttgagcaa
tatgatgcacaaggaaaagatgtgattattccggcaggagtttacaatttggaggctcta
aaggcctatggcttggacaggggatggtgcccttactttcttgccagacactcgataaca
catgccaacataatagtttacagctactattacctcctagatcctaaaattgctgatctg
gtctctaaagagcttggaaaaagttctgtggtagttttcgatgaagcacacaatatagat
aatgtttgcatagaatcaatgagtttacatatatcaagaaagacattggataaatgctct
ctcaatttagacagcctaaaggagaatatacaacggataaaagatgaagatgccagcaag
cttcagaaggagtacaacaggttggttgaaggattgaaggaggctaacatagccagggaa
actgatgtcatcatggctaatccaattcttccagatgaagttctacaagagtcagtgcca
ggcaacataagaaactgtgaacatttcatcatcttcatgaagagattcgttgagtatttg
aagtctcgttctcacattcaacacttcatacaggagagtccagcatcttttctaaaggat
tgcttgcagaaagtttgcattgagaggaaaccactgagattttgttgcgaacgtctgcga
tccctcttgcgaacgctggaactttccgacatccaggattactctgccctcacacttgtt
gctaattttgcaaccatgatcagtacttacaccaaagggttcacattgatcatcgagccc
tacgatgaccgcacgccgaccatcagcaacccgctgatgcatttcagctgcatgaatgcc
tccatcgccatcaagcctgtcttcgatagatttcaaactgtcgtcatcacttctgggact
ctttctccagtcgaaatgtatcctcgcatactcgatttccatcctgtgacgatggcttca
ttcaccatgtccctttccagaccgtgcatttgcccgatggtcgtgacgagaggtagtgat
caggtgtcggtcagttcaaaatttgaatccagagaagatccagctgtaatacgaaactac
ggactcttattggcggagatggcgtcggtagtggctgatgggatcgtctgtttcttcact
agctacgtctacatggaatctatcattgctgcatggtatgaccaaggcttgattgatcaa
gttcagaagtataagttgttgttcattgaaacgactgatgcagctgaaacttcactggct
ctggcaaactatcaaaaagcctgtgaaaatggaagaggagctgtgttattgtctgtagcc
agagggaaagtttctgaagggattgattttgaccaccattatggacgagctgttattatg
tttggtgtaccctatgtttatactcaaagcagaattctaaaggcaaggcttgaatattta
cgtgaacaattccacattcgcgaaaatgattttttaacatttgatgcaatgaggcatgca
gctcaatgtgttggcagagcactcagaggcaaaactgactatggagtgatggtttttgct
gataagaggtttgcaagaacggataagaaaaataaattaccaaaatggatacaggagtat
ctttccgattccgtgtgcaacctgtcaactgatgatgctgtacagttaacaaaacgattt
ctcaggaccatggctcaaccattttcaagggaagatcagctgggacattcactattaacg
cttgaacaattgatgtccgaggatgtccaacagcaattggagagaaaagttcatctgatc
gtgtga
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integrated database retrieval system
