Helobdella robusta: HELRODRAFT_105717
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Entry
HELRODRAFT_105717 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
hro
Helobdella robusta
Pathway
hro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HELRODRAFT_105717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_105717
Enzymes [BR:
hro01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
HELRODRAFT_105717
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HELRODRAFT_105717
mRNA degradation factors
5'-3' decay
Decapping complex
HELRODRAFT_105717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
20194774
NCBI-ProteinID:
XP_009009816
JGI:
Helro1_105717
UniProt:
T1EDX2
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MPNLPNHILKDLCARFILNVPKPECDDIVRLFFQMELAHWFYLDFVRDDDEECCYVGMKD
FAFQIFRCCDKFAIYLEDFDRYYEEWKVYKSAVPTYGAILLDPTLQYCLLLQGYNVKASW
SFAKGKVNEDERPEECAIREVYEETGFDIKKLIDPSNFLEHSMNEQTCRLYVVRDVPMDT
KFKPLTRNEVKRYSWFEVENLPTHKLDPTSKLKLNIPSNNFFMVMPFVRELKQRISEMKG
RDMKMEEKENGERKFDKQPEQRKQQKQHKRQQKHQQQQQKQQQQKQQQQQQQQLNLYQHA
NEPMNFGNQPLLPGTSRQLEQSVRNKPLLQTPSQYLHFPPHQTPFMQQYQPQQQQTPLLT
PFMQQYQPTYQPTYQPQYQSQQQQLLQQWQVNQQQQRRPHHHQEYFDSFLQNSEKIGGTE
SPTTSTPQSSRHRHPHKKIDTVGSHSSEHSSDEQTMATRRTERFGYPASRSEFGEEEPSP
PHGASDQHSQRIIGGNVTDNKRTAASKHKTPLLQLPSQQGVQMKSSSAGKITSNPTTATS
ARSLTNSTHSPSKNPSSTLITTSKTDYKTSIITTATTTAAATTTTAAAATTTTTATITAA
TTTATTAATYTWTTPETVTIATKSNEAFLAYNFMSPAWSNFKLDVEQLLNAMCS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaccttccaaatcacatcctcaaggacttatgcgcacgtttcatactgaatgtc
ccaaagccagaatgtgatgacattgtacggttatttttccagatggagttggcacactgg
ttctatctggatttcgtgagggatgacgacgaggaatgttgctacgttggtatgaaggac
tttgcctttcagatattcaggtgctgtgacaagtttgcgatttacttggaagattttgat
cggtactacgaagagtggaaggtgtataagagtgctgtgccgacgtacggcgctatcctt
ctggaccctacacttcaatattgcctactgttgcaagggtataacgtgaaggcaagctgg
agtttcgctaagggcaaggtcaatgaagacgagcgaccagaagaatgtgccattcgagag
gtgtacgaagagacaggattcgacattaagaagctgatagatccgagtaacttcctggag
cactccatgaacgagcagacgtgtcgcctctacgttgttcgcgacgtaccgatggatacc
aaatttaaaccactgactaggaatgaagtgaagcgttatagttggtttgaggttgaaaac
ttacctactcacaaactggacccaacgagcaagttgaaactgaacattccgtccaacaat
ttcttcatggttatgccttttgtcagagagttgaagcaaaggatatctgagatgaaaggc
agagatatgaaaatggaagaaaaagaaaatggagaaagaaaatttgataaacaaccagaa
caacgaaaacaacaaaaacaacacaaacggcaacaaaaacatcaacagcagcaacaaaaa
cagcagcaacaaaaacagcagcaacaacagcagcagcaactaaatttatatcagcatgca
aacgaacccatgaactttgggaatcaaccgctgctaccaggaacctctagacaattggaa
caatcggtcagaaacaagccactacttcaaacgccatcacagtatctacactttcctccc
catcaaactccattcatgcagcagtatcagccacagcagcaacaaacgccacttctaaca
ccattcatgcagcagtatcagccaacgtatcagccaacatatcagccacaataccagtca
cagcagcaacaactattacaacagtggcaagtgaatcagcagcaacaaagaagaccacat
catcatcaagaatattttgacagttttctacagaactctgaaaagataggtggcacagag
tcaccgaccacctcaaccccacaatccagtcgtcatcgtcatccccataaaaaaatcgat
actgttggttcacactcgagtgaacattccagtgatgaacagacgatggctacacgcagg
acagaacgtttcgggtaccctgcttcgcgtagtgaatttggtgaagaagagccctcacca
cctcatggtgcaagcgaccaacacagccagagaatcatcggtggaaatgtcactgataac
aagaggacggcagccagcaagcacaaaactccattgctccaacttccttcacagcaaggt
gttcagatgaaaagttcatcggcaggaaagatcacctccaatccaacaactgcaacaagt
gcaagatcgctcaccaactcaacacactcaccatcaaaaaatccaagttcaacattgata
acaacatcaaaaacggattataaaacatctattattactactgctactactactgctgct
gctactactactactgctgctgctgctactactactactactgctactattactgctgct
actactactgctactactgctgctacttatacttggacgacaccagaaactgtgacgata
gccactaaatctaatgaagcctttcttgcctacaacttcatgtcaccggcctggtcaaat
ttcaaactggacgtcgaacagctgttgaatgccatgtgcagctga
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