KEGG   Helobdella robusta: HELRODRAFT_105872
Entry
HELRODRAFT_105872 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
hro  Helobdella robusta
Pathway
hro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HELRODRAFT_105872
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hro03041]
    HELRODRAFT_105872
Spliceosome [BR:hro03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    HELRODRAFT_105872
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd PRP4 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_EIPR1 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_Vps41 WD_LRWD1
Other DBs
NCBI-GeneID: 20194782
NCBI-ProteinID: XP_009015232
JGI: Helro1_105872
UniProt: T1EDY0
LinkDB
Position
Unknown
AA seq 499 aa
MSDDEEMVPRQIRNKIIHYGSLEENIASIRNSAASEAAKISKHEVLETTDFMDSEVRQEQ
LEEYEKRKKARLIHVSTDDSEVKAQLRQLGEPICYFGEGPADRRDRLRELLALRGQNLLK
KKKEELAPKKAKQESEKVTWYHEGKTSLQEARAWIANYSIIRAAERIKIAKEEKLLPTSV
VNTKLQDLFKRNRMTSLIFSQIADSRPISYCSFSPNSALLATASWNGLCKLWSIPECEEL
RVLRGHSTQVGCVSFHPQSTLSISEDCCNLATCAHDGTVKLWSLKGETPMDSIEGHEPNR
VTKAVFHPSGKFLATCCFDSSWRFFDLELKEEILHQEGHCGPVYDISFQCDGSLALTGAT
DSFGRLWDLRTGRCVMFLEGHLKSILTLDFSPNGYQAATGSEDHSVKIWDMRQRGCLYTI
PAHTNIVSRVRFQRNTGLYLVSSSYDKTAKIWNHPNWSPSQALASHEGRVMSCDVSADDK
YIATTTYDKSFKLWSPDYN
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgtctgacgatgaagaaatggtacctaggcagattaggaataaaattattcattacggt
agtttagaagagaatatcgcctcaatccgaaacagtgcggccagcgaggctgcaaaaatc
agcaaacatgaagtcttggaaacaacagattttatggatagtgaagttaggcaagaacag
ctggaggaatatgagaaacgtaagaaggctcgtcttatacacgtctctactgatgactcg
gaagtgaaagcccagctgagacaattgggagaaccaatttgttatttcggtgaaggcccg
gctgacaggagagatcgattgagggagttgttggcccttaggggacagaatcttctgaag
aaaaagaaagaggagctggcccctaagaaggctaaacaagagtcggaaaaggtaacatgg
taccacgagggtaagacttcattgcaagaggcacgagcctggatagctaactactccata
atcagagcagctgaaaggataaagattgcgaaagaagagaaacttctaccgaccagtgtt
gtcaacactaagctacaagatctattcaaacgtaataggatgacgtcattaatattcagc
caaatagcagactccaggccaatatcttactgctcattctcacctaacagtgcattactg
gctactgcctcgtggaatggactttgcaaactctggtctatacctgaatgtgaagagtta
agggttctcagaggccacagcactcaagtcggctgtgtgtcattccacccacagtcaact
ctatccatatctgaagattgctgcaatctagctacatgtgcacacgatggcactgtgaag
ttatggtctcttaagggtgagacaccgatggacagcatcgaaggccatgaaccaaacagg
gtgaccaaggcagtcttccatccatcgggcaaattcttggctacttgctgttttgatagc
tcctggcgtttttttgaccttgaacttaaagaagaaattctgcatcaagaaggtcattgc
ggtccagtttatgatatatcattccagtgtgatggttcgctagctcttactggtgcaacg
gattcgtttgggaggctgtgggacttgcggactgggaggtgtgtcatgttcctggagggc
catctcaagtccatccttacccttgacttctcgccaaacgggtaccaggcagcaacgggt
agcgaggaccattcagtgaagatctgggatatgaggcagagaggctgcctgtataccata
cccgcccatactaacatcgtgtctagagtcaggtttcaacggaacacaggtctgtattta
gttagctcttcttatgacaagaccgcaaagatctggaaccaccctaattggtcgccctcc
caggccctggcaagtcacgagggcagggtcatgtcatgtgacgtgtcagctgacgacaag
tacattgccaccactacctacgacaaatcgttcaagttgtggtcgcccgactataattag

DBGET integrated database retrieval system