Helobdella robusta: HELRODRAFT_105974
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Entry
HELRODRAFT_105974 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_105974
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_105974
03036 Chromosome and associated proteins [BR:
hro03036
]
HELRODRAFT_105974
Enzymes [BR:
hro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HELRODRAFT_105974
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
HELRODRAFT_105974
mRNA cycle factors
Common to processing body (P body) and stress granule
HELRODRAFT_105974
Spliceosome [BR:
hro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
HELRODRAFT_105974
Chromosome and associated proteins [BR:
hro03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
HELRODRAFT_105974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
20194791
NCBI-ProteinID:
XP_009015431
JGI:
Helro1_105974
UniProt:
T1EDY9
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MDRELEQGAELKRMVGFDYTKLTPRNEKVEHELFKANNSGINFAKYEDIPVETSGNNCPP
NIESFSDINFGEIVNNNIKLCKYTHPTPIQKYAVPVILAKRDIMGCAQTGSGKTAAYLLP
LFSNIIETGEFIMSKFIDNSRYGRNRQHPCALVLTPTRELACQVFDEAKKFLYRSRVQPC
VIYGGADAGTQIREISRGCHVLIATPGRLIDLLERGLVGLDAIKYLVLDEADRMLDMGFE
PQIRRIVVEDDMPQTGRRQTLMFSATFPKEIQMLANEFLHDYIFLAVGRVGSTSENITQK
VLWVDEEEKRAFLKELLDAMGPNSLTLIFVETKKGADSLEFYLYKEGYMVTSIHGDRIQK
EREEALKSFKCGKRPILVATAVAARGLDIANVKHVINYDLPTDIEEYVHRIGRTGRVGNL
GLATSFFNDKNTSLAYDLFEILAESKQEIPEWLENLAYESKRYNGVPKKHKRWYYLQT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggatcgagagttggagcaaggagcagaattgaaaagaatggttggatttgattacaca
aaattaacccccaggaacgaaaaggttgaacatgagttgtttaaagccaacaacagtgga
attaattttgccaaatatgaagatattcccgtagaaaccagtggaaacaattgccctcca
aacattgagtcgttttcagatatcaattttggagagatagtgaataacaacataaagctg
tgtaaatatacccacccaacaccaatccagaaatatgcggtgcctgtcatactagccaag
agagatataatggggtgtgcccaaactggctcaggaaaaacagccgcatatctcctgcct
ctattcagcaacatcatcgaaactggagaatttattatgtcgaaatttatagataacagc
agatatggaagaaacagacagcatccttgtgcacttgtgctcacaccaaccagagagttg
gcatgccaagttttcgatgaagctaaaaaatttctgtatcgttcacgagtgcagccgtgt
gtaatttacggtggggcagatgcaggcacacagataagggaaatatcaaggggctgccac
gttctgatcgctactcccggaaggttgattgatcttctggagagagggcttgtggggctg
gatgctatcaaatatttggtgttggacgaggctgatcgaatgctggatatgggctttgaa
ccgcaaatccgaagaattgttgtggaagacgatatgccgcaaactggaaggagacagacg
ttaatgtttagtgccacatttcccaaggagattcagatgttagcaaatgagtttctacac
gattacatcttcctagctgttggtcgtgtcgggagcacaagtgaaaacatcactcagaag
gttttatgggttgatgaggaagaaaaaagagctttccttaaagagctgcttgatgctatg
ggaccaaacagccttacgttgatttttgtggagaccaagaaaggtgctgactcattggag
ttttatttgtataaagaaggatacatggtgacgagcattcatggtgacagaattcagaaa
gagagagaagaggcactgaaatccttcaaatgtggaaaacggccaattcttgtagctaca
gcagtggcagctaggggtttggacatagcaaacgtgaaacatgtcatcaactacgacctg
ccaactgacattgaagaatatgttcatcgcattggtcgaacgggcagagttggaaaccta
ggattggctacatcattttttaacgacaaaaacacatcacttgcttatgatttgtttgaa
atacttgctgaatctaaacaagaaattcctgagtggctagaaaatttggcgtatgaatcg
aagagatataatggggtaccgaaaaaacataaaaggtggtattatttgcaaacttga
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