Helobdella robusta: HELRODRAFT_106036
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Entry
HELRODRAFT_106036 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
hro
Helobdella robusta
Pathway
hro03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HELRODRAFT_106036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hro03009
]
HELRODRAFT_106036
Ribosome biogenesis [BR:
hro03009
]
Eukaryotic type
Pre-60S particles
RNases
HELRODRAFT_106036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
20194796
NCBI-ProteinID:
XP_009015528
JGI:
Helro1_106036
UniProt:
T1EDZ4
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MNNNTDLPEVFGRKRIAHCSDIEPKKPVKHKLRIGVRPSPQQIMLDRMKYFYDNSCTLQN
NNSNNNSNNNNNEDKFNSSINKVGNNETNKFNNNLNSFNSSNGKETTSNNQGASSSIKTT
SATSSSIKTSSIATSATSSVATLSSNSSSRVLVVYGGGVNSPSHNVNNFAFHKTNNNCIK
ATTTTTAATTTASPHQKIETSAYSVERSNAAVNKGGPVSLKGSIRIAHKPTTQVASLRPP
PNAVVTKQALPYDLRQSVLNSFIDYCLKIYDNETDAFQRALSEEEKLARSSSSRQIYKSH
AVSQRVNLSRESSSSTECPQLSPSTPSFKSLSHDYVLGGRLAQETSYSINRSNKSHTTPI
VVSPCELYKHLQPYILTREQLLSNGFPVRDVAGKNILIVPSERTLVKKPSLNSKEKICCR
CGKGFIVLSNGNYLTNENCFYHWGHSYKKRVAGMLDHQYMCCQSDISAKGCEVAECHVHE
ENKLTDLAGYVETTTCKPRKNDDYGVFALDCEMVYTTVGCELARVTVVNQDLKAVIDDLV
KPDNKVVDYNSRFSGIDERDLEKVTTSLSDLQKKLLSLFNDRTILIGHSLDNDMIALKLI
HGKIVDTSVVFPHKSGPPYKRALRNLSTEILKKIIQDGVNGHNSKEDADTCMELILHKVK
EDIKKASRFC
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaacactgaccttcctgaagttttcggtagaaaacgaattgctcattgtagt
gacattgaaccaaaaaaaccagtgaagcacaagctgagaattggtgtcagaccatcccca
caacaaatcatgcttgacaggatgaaatatttctacgacaacagctgcaccctacaaaac
aacaacagcaataataatagtaataataataataatgaagataaatttaatagtagtatt
aacaaagtaggcaataatgaaaccaacaaatttaacaataatttaaatagtttcaatagc
tcaaatggtaaggaaacgacttccaacaatcagggtgcatcatcctctattaaaacaaca
tctgcaacatcatcttctattaaaacatcatctattgcaacatctgcaacttcttctgtt
gcaacattatcatcaaatagtagctccagagtattagtagtgtatggaggaggcgtgaat
tctccatcacacaacgtcaacaacttcgctttccacaagacaaataacaattgcatcaaa
gcaacaaccacaacaacagcagcaacaacaacagcatcacctcatcaaaaaatagaaacg
tcagcgtattcagtggagcgatcgaatgcagcagtcaacaaaggaggccctgtttcgttg
aagggctccattcgaattgctcataagccaactactcaggtagccagcctccgaccaccg
cccaatgcagttgtgaccaaacaggctctgccctacgatctgaggcagagtgtactcaac
agtttcatcgactactgcctgaagatctacgataatgagactgatgcttttcaaagggct
ctatcggaagaggagaagttagctcgatcgagctccagcaggcagatatacaaatcacat
gctgtctcgcagagagttaatctttccagagagtcatcatcttctacagaatgtcctcag
ttatcaccaagcactccttcctttaaatccctcagtcacgattatgtgttgggaggcagg
ttggcacaggaaactagctactccataaacaggtccaacaagagtcatacaacgccaatt
gttgtctcaccttgtgagttgtacaaacacttgcaaccttacatcctgactcgtgaacag
ttgctatcaaatggcttcccagttcgagacgtagcaggaaagaacattttaattgttcct
agtgaaagaactcttgtcaaaaaaccatcattaaactccaaggaaaagatatgttgtcgg
tgtggtaagggattcattgttttgagcaatggcaattatctaacaaacgaaaactgcttc
taccattggggacactcatacaaaaaaagagttgctggcatgttggatcatcaatacatg
tgctgtcagagtgacatctcggccaaaggatgtgaagtagcagagtgccatgtacatgaa
gaaaataaacttactgatctggccggctatgttgaaacgacaacctgcaagccaagaaaa
aatgatgattatggagttttcgctctcgattgtgaaatggtgtacacaacagttggatgt
gagttggctcgggtaaccgttgtcaaccaagacttgaaagctgtcatagatgatttggtc
aagccagataacaaagttgttgactataattcaagattcagcggtatagatgaaagagat
ttggaaaaggtcactacatcattaagcgatttgcaaaagaaactgctatctctgttcaac
gataggacaatacttatagggcacagtctggataatgacatgattgcccttaaattaatt
catggcaagattgtggacacgtctgttgtcttcccacacaaatctggacctccttataaa
agagctcttcggaatttatcaacagaaatactaaaaaagattattcaagatggcgtgaat
ggacacaatagcaaagaagatgcagacacatgtatggaactcatactccacaaagttaaa
gaagacattaagaaggcttctcgattttgttaa
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