Helobdella robusta: HELRODRAFT_106217
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Entry
HELRODRAFT_106217 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
hro
Helobdella robusta
Pathway
hro04140
Autophagy - animal
hro04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
HELRODRAFT_106217
04148 Efferocytosis
HELRODRAFT_106217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hro04131
]
HELRODRAFT_106217
Membrane trafficking [BR:
hro04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
HELRODRAFT_106217
Hops complex
HELRODRAFT_106217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
PipB2_N
Motif
Other DBs
NCBI-GeneID:
20194811
NCBI-ProteinID:
XP_009015970
JGI:
Helro1_106217
UniProt:
T1EE09
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MQWPDVVDFSKFEVSAATFGGPIALLLKPSTANNKPIIFILSSSGKELGLIRWNSGSLLK
VGWSLKEELLCIQDDGNVLIYDIFGNFVRNFTMGKDASNVKVTDAQIFITASSSIGVVVL
TASFRFYMVTNIYDARVRQLPDFPGCDLPPSSWCILNRALTPQILIARNSDLYLLDMTGS
CEKQQIDSSLHPAAILEMCLSWDNKYLAMFLSSGTLWIGSSDLKNTYCKYATDNYSRPKQ
LAWCGTGAVLMNRPMFLLLVGPNMDDVRYDYDSPVHLIQERDGVRVLSVYSHEFIQKVPK
ELEDVFKIGSVEPSAVLFESAKFFIEGKKEAHEYLKLIGNDLLHAVQGCLVASGYEFDVK
NQKALLKASSFGKCFLKDYDSKPFIQMCRMLRVLNELKSKDVGIPLTLLQLNQLTMENVI
KRLLLRKLYWVAYEMSRYIKLNDKNGTHLVLSVWACDKVGGIDVTGFVSQQHQQQQPISY
RDIIDKAIAHNRIDLALKLISREVRVCEQVPLLLKLNREADALNAAIKSGDTDLIFLVVF
QWKDKLAHGEFLRSIRLFPVAFQLYLQHCREQNVEMLLDIHYQEDNHADEAVCRIMLSYD
DDKFERRLGSLIAAQEASVKAKNDFLAKLIEDQIKLLKLQRRLEEEMNLPFIDLSIDDTI
GQLIGKEEHKRVEQMRKDFKLSDKRFWWLKIQKLAELGQWLELDKFSKSKKSPIGYEPFV
DVCIKYNNVNEGKNYLSKVLPEHLVMYHIKLGLLEQAGDLAIQTKNEDDVDLVLSKCSAT
SNRELYNKLMTFQSQLKR
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcaatggcctgatgttgttgatttcagcaagtttgaagtgtctgctgctacatttgga
gggcccattgccctgttattgaaaccatctactgctaacaacaagccaatcattttcatt
ttgtcatcttctggcaaggaattaggactaattagatggaacagtggaagtcttttaaag
gtgggttggtcgttaaaagaggaactcttatgcattcaagacgacggaaatgttctaata
tacgatatctttggtaactttgtgaggaatttcacaatgggaaaggatgcaagcaatgtg
aaggtcacagatgcccagatattcatcactgcttcatcatctatcggtgtagttgttcta
acggcatctttccgattctacatggtcactaatatttacgacgccagagtcaggcagctg
ccagattttccaggatgcgatctcccaccatcatcgtggtgcattctgaatcgcgccctg
acgccccaaattctcattgccagaaattctgacctatatctcttggatatgactggttct
tgcgagaaacagcaaatcgacagctcgttacatccggcggccatcttggagatgtgcttg
tcctgggacaacaaatacttagcgatgtttctcagttccggtactctatggatcggatcg
tctgatttgaaaaatacctactgtaaatatgccactgataattattctaggcctaaacaa
ctggcttggtgtgggactggagctgtcttgatgaacagaccaatgttcctcttgctagtc
ggtccgaatatggatgacgtcaggtatgattatgactcacctgtgcacttgatccaggag
agagatggagtgagagtgttgagtgtgtattcgcatgaatttattcaaaaagttccgaaa
gagttagaagacgtattcaagatagggtcagtagagccaagtgcggtcctgttcgaatct
gccaagttcttcatcgaaggtaagaaggaggcgcatgaatatttgaagttgatagggaat
gatttgttgcacgctgtacaaggctgcctcgttgctagtggttatgaatttgatgtcaag
aatcagaaagctttgttgaaggcatcatcattcggcaaatgtttcttgaaagattacgac
agcaagccgtttatacagatgtgtagaatgttgagagttctcaacgagttgaaatccaaa
gatgtcggcattccattgacgctgcttcaattaaaccagctaacaatggaaaacgtaata
aagaggttactgttgaggaagttgtactgggttgcctatgaaatgagtagatacataaag
ttgaatgacaagaatggcacccaccttgtgctgtctgtttgggcatgcgataaggttggt
ggtattgacgttacggggtttgtttctcaacaacatcaacagcaacaaccgatttcgtat
agagatatcattgataaggctattgcacataacagaattgatcttgctcttaagctgatc
agcagagaagtgagagtctgcgaacaagtaccgttgctattgaagttgaacagggaagct
gatgcactgaatgctgccatcaagagcggcgatactgatctcatatttttagttgtcttt
caatggaaggataagttggctcatggggaatttttgaggtccataagattatttcctgtt
gcgtttcaactctacctacaacactgcagagagcagaacgtggagatgctgctggacatt
cattaccaggaggacaaccacgccgatgaggccgtctgcaggatcatgctcagttatgac
gatgataaatttgaacgaaggcttggttccctcatagcagcacaggaagcatcagtgaaa
gcgaagaacgattttcttgcaaagctgatagaagaccagataaaactactgaaacttcaa
agacgtttggaggaagagatgaatcttccattcattgatctctccatcgatgataccatt
ggtcaactcattggtaaggaggaacacaagcgcgttgaacagatgaggaaagatttcaaa
ttaagtgacaaaagattttggtggctaaagattcaaaagttggccgaattgggtcagtgg
ttagaactggataaattttcgaaaagtaaaaagtctcccattggctacgagccatttgtt
gatgtttgtatcaagtacaataacgtgaacgagggtaaaaattatttatctaaagtccta
ccggaacatctggtcatgtatcatatcaaattagggctattagagcaggcaggtgatctg
gcaatacagacaaaaaatgaagatgacgtcgatttggtcctgtctaaatgttcagcgaca
tcaaatcgagaactttacaataaattaatgacatttcaatcacagctaaaacgctaa
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