Helobdella robusta: HELRODRAFT_106472
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Entry
HELRODRAFT_106472 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
hro
Helobdella robusta
Pathway
hro00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HELRODRAFT_106472
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hro01007
]
HELRODRAFT_106472
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hro03016
]
HELRODRAFT_106472
Enzymes [BR:
hro01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
HELRODRAFT_106472
Amino acid related enzymes [BR:
hro01007
]
Aminoacyl-tRNA synthetase
Class I (U)
HELRODRAFT_106472
Transfer RNA biogenesis [BR:
hro03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HELRODRAFT_106472
Prokaryotic type
HELRODRAFT_106472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
20194829
NCBI-ProteinID:
XP_009019517
JGI:
Helro1_106472
UniProt:
T1EE27
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MADVQVTENGNDNEPPKTAKQLAKEAKKLEKLAKFDAKKSKIDQKKQIDADSVKEGKEKK
VKEKLTITYDKSTKPGDKKDLSGPMPDSYSPQYVEAAWYAWWEKSGFFKPGYGRSSATEP
NPNGKFMIVIPPPNVTGSLHLGHALTNSIQDAITRWHRMNGKTTLWNPGCDHAGIATQVV
VEKKLWKERKLTRHDLGRKAFVDAIWKWKEEKGDRIYHQLRILGGSYDWDRACFTMDPKL
SKAVTEAFVRLHESGIIYRSYRLVNWSCSLKSVISDIEVDKRELTGQTMLSVPGYDEKIE
FGVLVSFAYPVENSNEEIVVATTRIETMLGDTGVAVHPDDPRYKHLTGKSCVHPFFDRLL
PIVFDDMVDTQFGTGAVKITPAHDHNDYECGKRHNLQFINIMKDDGTLNESCGQFSGMKR
FHARKKVLQALKDKGLFRACQNNPMVVPVCSRSKDIIEPLLKLQWFVNCSDMAQKAVDAV
RNGDLKIIPDAFEKTWYQWLEKCRDWCISRQLWWGHQVPAYFVTIDDPYILPGTEEDNRF
WVSASSEEEARKKAARRFKVDEDKITLRQDEDVLDTWFSAGLFPFSVLGWPDPSEDLDFF
YPGSLLETGHDILFFWVARMVMLGLQLLGKLPFKEVYLHAMIRDKYGRKMSKSLGNVIDP
LDVIRGIQLEDLHKQLYDGNLDPKEIEVAKEGQKAQFPQGIPECGTDALRFGLCAYTSQG
RDINLDVLRVQGYRFFCNKLWNATKFVLTNLTDSFKPLSEFKLTGKESSMDLWIVSRLCD
TVESCNRAFLTYDFPVATTACYNFWLYELCDIYLEHSKPILYGNDEESKTTTREILYSCL
ETALRLIHPFMPFISEELYQRLPARTADRPPSLVVSPYPKTEQFTWKDVSLEKEIDFVMM
TIKTVRFMRADYQLTKQKTDLYVRCLDKDSEIILSKYKDLVKTLTSSNFVMVLTKSSADQ
PPQGCAIQTVSTKCEVHMMLKGLIDFTKEAEKLKDKKGKLEVQLNSFLKLTQKPDYGSKV
PEHVRQQNTEKIGEINQEIDHLNLAIKKLMKMEP
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgttcaagtaactgaaaacggtaacgacaatgaaccgcctaagacggctaag
caactggcaaaagaagccaaaaagttggaaaaattagcaaaatttgatgctaaaaaatcc
aaaattgatcaaaagaagcaaattgatgcagattcagtgaaagaaggtaaagaaaagaaa
gttaaggagaagttgacaatcacttatgataaaagtaccaaacctggtgacaaaaaagat
ctttcaggtccaatgcccgattcatacagtccccagtatgtcgaagcagcttggtatgca
tggtgggaaaaatctggcttttttaaacctggatatgggagatcgtcggccacagaaccc
aacccaaatggtaagttcatgatagtgattcctcctccaaatgtcactggctcattacat
cttggtcatgcactcaccaactccatacaagatgccatcacacgatggcatcgtatgaat
ggcaagacaacgttgtggaaccctggttgtgatcacgcgggcattgccacacaagtcgtt
gtggagaaaaagttgtggaaggagcgcaagttgaccaggcatgatttgggcaggaaagct
tttgttgatgcaatttggaaatggaaagaagaaaaaggagatagaatatatcatcagttg
cgaatacttggaggcagttatgattgggacagggcatgtttcaccatggatcccaagctg
agcaaagcagtgacagaggcatttgtgaggttgcacgagtcgggcatcatatacaggagt
tacaggctggtcaactggtcatgcagtctcaagtctgtcatatccgatatcgaggttgat
aagcgagagctgactggtcaaacgatgttatctgtgccagggtatgatgaaaagattgaa
tttggagtgctcgtgtcatttgcttaccccgttgaaaattcaaatgaagagatagtcgtt
gcaacgactcgcattgagacgatgttgggtgacacgggggtggcggtgcatccggacgat
ccgaggtacaaacatctgacgggcaagtcctgcgttcatcccttctttgatcgacttctt
cctatcgtgtttgacgacatggttgacactcaattcggaacgggtgctgtgaagataaca
cctgctcacgaccacaatgattacgaatgtggcaagaggcacaacctgcaattcatcaac
attatgaaggacgacggcacactcaatgaaagctgtgggcagttctctggtatgaagaga
ttccacgccaggaagaaagttttgcaagctctcaaagacaagggcttattcagagcgtgc
caaaacaatcccatggtcgtgcctgtctgcagtcgatcaaaagatatcattgagccgttg
ttgaagttacagtggttcgttaactgcagtgatatggcacagaaggcagttgatgcggtc
aggaatggtgacctgaagatcattcccgacgcatttgagaagacctggtaccagtggctt
gaaaaatgcagagattggtgtatatctcgtcagttgtggtgggggcatcaggtgcccgcc
tactttgtaaccatcgacgatccatacattcttcctggaactgaagaggacaacaggttc
tgggtgagtgcatcatctgaggaagaggcaaggaagaaggctgccaggaggttcaaagtg
gatgaggataaaataacactgaggcaggatgaagatgttttagacacctggttctcggcc
ggtctctttccattctccgttctcggatggcctgatccgtcggaggatctggactttttc
taccctggcagtctgttggagacgggccatgatatcctgttcttctgggtggcccgcatg
gtcatgctgggtctgcagttgcttggcaaattaccattcaaagaggtatatctgcatgca
atgatacgagacaagtacggtcgcaagatgagcaagtcacttgggaacgtcattgaccca
ctggatgtcatcagaggaatccaacttgaagatcttcacaagcagttgtatgacggcaac
ttggatcccaaggaaattgaagttgctaaagaaggacagaaagcacaattccctcaaggc
ataccagagtgtgggactgacgcactgaggttcggtctgtgtgcctacacatctcaaggt
cgtgacattaacctcgacgtcttgagagtgcaaggttacagatttttttgcaacaaactg
tggaacgccaccaagttcgtgctgaccaatctcactgacagcttcaagccactgtcagag
ttcaagttgacaggcaaggagtcatccatggatctctggatagtcagtcggctgtgtgac
acagttgaaagttgcaacagagccttcttgacgtacgacttcccagtggccacgactgct
tgctacaacttctggctctacgaactttgcgacatctacttggaacattcaaagcccatt
ttgtatggaaatgacgaggagagcaaaacaaccacaagagagattttgtacagctgtttg
gagacagccctgcgtctcatccatcctttcatgccatttatcagtgaggaattgtatcaa
agattgccagccaggactgcagacagacctccgagtcttgtcgtctcgccatatccgaag
acagaacagtttacctggaaagatgtcagcttggagaaggagattgactttgtgatgatg
accatcaagacagttcgattcatgagggcggattatcaactgaccaaacaaaaaactgat
ttgtatgttcgatgcttagataaagactcggagataattctcagcaaatataaagacctc
gtgaaaacgttgacgtcatcaaatttcgtcatggtccttacgaaatcctctgcagaccaa
cctccacaaggctgtgccattcaaactgtctcaaccaagtgtgaagtccacatgatgctc
aagggattgatagatttcacgaaagaggcagaaaagttgaaggataagaaaggcaagtta
gaggttcagttgaatagctttctcaaacttactcaaaagcctgattacgggtccaaggtt
ccagagcatgtaagacaacaaaacactgaaaagataggggaaattaaccaagaaatagat
catttgaatctggctatcaaaaaattaatgaaaatggaaccctag
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integrated database retrieval system
