KEGG   Helobdella robusta: HELRODRAFT_108224
Entry
HELRODRAFT_108224 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
hro  Helobdella robusta
Pathway
hro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HELRODRAFT_108224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hro03041]
    HELRODRAFT_108224
Spliceosome [BR:hro03041]
 Complex A
  U2 snRNP components
   U2 related factors
    HELRODRAFT_108224
 Complex B
    HELRODRAFT_108224
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 20194973
NCBI-ProteinID: XP_009029265
JGI: Helro1_108224
UniProt: T1EEH1
LinkDB
Position
Unknown
AA seq 578 aa
MMAEIDSCSMNEMASNVSSSLMNSTENSREENSRDTDGFNDLMSNNVVEEKQVGVVLMGP
GARKDQQIYDLPKLTSLQKENIQKAKKYAMEQSIRTVLLKQTITHQQQQMMNLQNSIQRQ
QAVALMCRVYIGSINFEIKEEMIRQAFLPFGPIKSMSMPYDTVGKHHKGFAFLEYETPEA
AALCLDQMNGIMISGYTIKVCKVGRPSNMPQAQIIIDKIMEESKSYNRIYVAAIHPDLTE
NDIKSVFEAFGRITHCQLAPDPNRPNKHKGYGYLEFELLQSALDAVMGMNLFDLGGQHLR
VGRAITPPNAFTPPPTSGSLPTASAIAAAAITAKITALEAISKPVGVVEINPSPLQTSSL
ANDENSNSPATSSTRQRTSKFGGFSSGPGSTNVPPPSIYIPPTTLVNSASTSTSSTSKRP
PTKGDPNSKSSSDLKKKLEIMAEMSELADIQTLQQQEDIQIKGHQARHMVMQKLLRKKES
RVMVLQNMVGPEDVDEELEHEVTDECSKFGEVEKVVIYQEKQGEDDDAPIFVKIFVEFKH
PTGVEAAVSSLNGRFFAGRTVSAKRYDQDLYDNNDFSA
NT seq 1738 nt   +upstreamnt  +downstreamnt
gatgatggctgaaattgattcttgtagcatgaacgaaatggcttcgaatgtgtcatcatc
attgatgaacagcactgagaacagcagagaggagaacagcagagacactgatggattcaa
tgatcttatgtcaaacaatgtcgtagaggagaaacaggtcggagttgtgttgatgggacc
aggagccaggaaggaccagcaaatttatgacttgccaaaactaacaagtctccaaaaaga
aaacattcaaaaagcaaaaaagtatgcaatggaacaaagtatcaggactgttttattgaa
acagaccatcacccatcagcaacagcaaatgatgaatttacaaaattcaatacaaagaca
gcaagcagttgctttaatgtgcagagtatacataggctcaataaattttgaaattaaaga
agaaatgatcaggcaagcatttctaccatttggtccaatcaaaagtatgagcatgcctta
cgatactgtgggcaaacatcacaaggggtttgcattcttagagtacgagacccctgaggc
agcagctctttgcttggaccagatgaatggtatcatgatatcagggtacactataaaggt
ctgtaaggttggtcgaccaagtaacatgccacaagctcagataatcatcgacaagatcat
ggaagaatccaagtcgtataatcgaatatacgttgctgccatacatccagacctcactga
aaatgacattaaaagtgtgtttgaagcatttggccgcataacacattgtcagttggcacc
tgatcctaataggcctaacaagcacaaaggttatggttatttagaatttgaattgttgca
gagcgcgttggatgctgttatgggcatgaacttgtttgatctaggaggacagcaccttcg
agttggaagggccattactccgccaaatgcattcacgccacctccaacatctggatcact
tccaacagcatctgctattgctgcagctgcaataactgcaaagataactgcgctggaagc
catcagcaagccggtaggtgtggttgaaattaatccaagtcctctgcagacgtcatctct
agctaatgatgaaaattcaaactctccagcaacaagttcaacgcgtcaaagaacatccaa
atttggaggattcagtagtgggccaggatcgaccaacgtaccacctcccagcatctacat
acctcccactactctcgtcaattctgcctccacttcaacttctagcacttcaaaacgacc
acctacgaagggcgaccctaacagcaaatcatcttctgacttgaaaaagaaacttgagat
aatggctgagatgtcggagttggctgacatccaaacattacaacagcaggaagacattca
gataaagggacaccaggccagacacatggtcatgcagaagttgcttagaaaaaaagagag
tcgagtcatggtgctgcagaacatggtgggaccagaagatgtggatgaggaattggaaca
cgaagtcacagacgaatgttccaagtttggtgaagttgaaaaagttgtgatatatcagga
aaagcaaggagaagatgatgacgctccaatatttgttaagatatttgttgagttcaaaca
tcctacaggggtcgaggcagccgtcagttcattgaatggtagattttttgcaggccgaac
tgtgtcagccaaacgatacgatcaagatttatatgacaacaatgatttctctgcataa

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