Helobdella robusta: HELRODRAFT_108854
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Entry
HELRODRAFT_108854 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
hro
Helobdella robusta
Pathway
hro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HELRODRAFT_108854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hro03036
]
HELRODRAFT_108854
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_108854
Chromosome and associated proteins [BR:
hro03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
HELRODRAFT_108854
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
HELRODRAFT_108854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
AAA_14
Motif
Other DBs
NCBI-GeneID:
20195033
NCBI-ProteinID:
XP_009010070
JGI:
Helro1_108854
UniProt:
T1EEN1
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MTTQPINQSNDRSTNQPISYEGLGPCLIVSPATVMKQWIKELLKWTPHFRCVLVHSFSKR
EDRKHQQPQQPPLHSTIVVSSYNFILRNCDTFLKHPWHYVVLDEGHKVRNPDAKITLVCK
QFRTCHRVILSGSPIQNNLKELWSLFDFIFPGKLGTLPDFMTHFNVPIVQGGYATSSDIQ
VETAHRCAKALQDTIAPYLLRRTKQQVASDIELPSKNEQVLFCRLTDLQRELYEDYLKSK
DCRSILEGQSLIFPGLIKLRKLCNHPDLCTGGGGDDDDDDDDKALGHDSNKKDFSFKKVG
SYGFWKDSCKMVVLKSLLPLWKKQQHKVLLFSQGRQMLDIIEQFIKQEGYTYLRMDGSTT
IQSRQNLVSKFTEDPSIYLFLLTTRVGGLGLNLAAANRVIIFDPDWNPSTDTQAKERAYR
IGQKSNVTIYRLLTMGTIEEKMYHRQIFKQFLTNRVLDDPRQQRFFKFNDLHDLFTLGND
DVTAGTETSAIFAGTSSSVRAKSLKRKMKKKKELKEKKKMKMTMKSERKVKSGEIDGKGV
GGWKRRTRSDTQKKYDKNDDASYNKTNYNDDDDDDDDNFDDDDNDEENDDNRNDDSEVLN
NGDKDDNSFKSPTISLAVDDVKKNKMMEMARRLSAMIGKQQQPLQQQQQPLQPLQQPLQP
LQQPQQQPQLQQLQEQDKQQKIRHRKHHQHSSHLRHKKKKHADEKDITMDGHVIKNLVKI
IPARYTTDDGDDVTRKSDNKNKNYNEKRISKRCDDDDDDYVLSKLFKKSDVHSVMQHDRI
MNQSRPDYVLVQLEAIKVAEEAVMMLKRSQENCRRHSSATSGRLDVHRPTWTGRSGEVGA
PGRKRFGDKKLAKPKPVNPSFLSSPQTSSSLSSTVSSSSSLPSSSSSSTATTSTTASFSA
FLSSTSSSLSSKTTSSPLPPSSRSSSSSRSSSSSSSLLRNGKFNGTALFDDAIRHVISGI
YGDGSDDDGGGGDDDDNSKTTKIINCQTVNKNVMPSSQLLSLLNARNTSLRPASADAEDD
DADNNNNNDNNNNNNNNINLASNNPSNNLTNDSSFSDVYRSKSATAIGSSSSATEDPGHF
GLELAAEIKRFVNRSTYSDCTHQASSEQLVKYFKNKIHPSQSAIFKEILKRVCSFKKVQG
VGVFYIKSGFKS
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgacaactcaaccaatcaaccaatcaaatgaccgctcaaccaatcaaccaatcagctac
gagggattaggaccttgcctaatagtcagtcctgcaactgtgatgaaacagtggattaag
gaattgctaaagtggacccctcacttcagatgtgtgctcgttcactcgttctccaaacgc
gaagatcggaaacatcagcaaccacaacagccacctcttcattcgaccattgtcgtctcc
agctacaacttcattctccgaaactgtgacaccttcttgaaacacccctggcattatgtt
gtccttgatgaggggcacaaggtcagaaaccccgatgccaaaatcaccctcgtctgtaaa
cagttcagaacatgtcatcgagtcatcttatccggctctccgatacaaaacaaccttaaa
gaattgtggtccttgttcgattttatctttcctgggaagttaggaactttgcccgacttc
atgacacatttcaatgttccaattgttcaaggcgggtatgccacatcatcagatatacag
gtggaaacggcccacagatgcgccaaagccctgcaggataccatagccccctaccttttg
agaagaacgaaacaacaagtggccagtgacatcgaacttccgtcgaaaaatgagcaggtt
ctcttctgtaggcttaccgaccttcagagggaactttacgaggattatttgaagtcaaaa
gattgcaggtccattcttgaagggcagtctttgatatttcccggtttgatcaaactgaga
aaactttgcaaccatccagacttgtgcaccggcggtggaggtgacgatgacgacgacgac
gacgataaggcacttggccatgactccaacaaaaaagattttagctttaagaaggttggt
agttatggcttctggaaggatagttgtaagatggtcgtgctaaagtcacttctgcctctt
tggaagaaacaacaacacaaggttctactattcagtcaaggaagacaaatgttggacatc
atagagcagttcattaagcaagagggatacacctacttacgtatggatggctccacaact
attcaatccaggcagaatctcgtttccaagttcactgaggatccatcgatatatctgttc
ctattgaccactcgcgttggagggcttggcctcaacctggctgctgctaacagggtcatc
atatttgacccagattggaaccccagcactgacacacaggccaaagagagggcatacagg
attggtcagaagagtaacgtgaccatctatcgtctgctcacgatgggtaccattgaagag
aaaatgtaccacagacagattttcaaacagttcctcactaatcgtgtcctggacgacccc
agacagcagagatttttcaagttcaatgacctccatgaccttttcacactcggcaacgat
gacgtaactgccggcacggaaacaagcgccatcttcgccggaactagttccagcgttcgg
gcgaaaagtctgaagaggaagatgaaaaagaaaaaagaacttaaagaaaagaaaaagatg
aagatgacgatgaaaagtgagaggaaggttaaaagtggagagattgatggtaagggagtg
ggtggctggaaaagacgaactagaagtgatacgcagaaaaaatatgataaaaatgatgat
gccagttacaacaaaaccaactacaatgatgatgatgatgatgatgatgataactttgat
gatgatgataatgatgaagaaaatgatgacaaccgtaacgatgacagcgaagttttaaat
aatggcgacaaggatgacaatagttttaaatcgcctaccatctcccttgctgttgatgac
gtaaagaaaaataaaatgatggagatggctaggcgattaagtgctatgattggtaagcag
caacaaccactacagcagcaacagcagccactacaaccactacagcagccactacaacca
ctacagcagccacaacaacaaccacaactacagcagctacaagaacaagacaaacaacaa
aagattcgtcacagaaaacaccatcaacacagcagtcatcttagacataagaagaaaaag
catgctgatgaaaaagacatcacaatggatggccatgtaattaaaaatttggtcaaaatc
attccagcccgctacacgaccgatgatggcgatgacgtcactagaaagagtgataataag
aataaaaattataacgaaaagagaattagtaaacgttgcgacgatgatgatgatgattac
gttttgtcgaagttgttcaaaaaatcagacgtacacagcgtcatgcaacacgaccgcatc
atgaaccagtctcgcccagactacgtgctcgtgcaacttgaagccattaaagtggccgaa
gaggccgtgatgatgttgaagcggtcgcaggaaaattgtcgacgccactcgtcagcgacg
tctgggcgtctagacgtccatcgtccgacatggactggtagaagtggtgaggtcggcgcg
cctgggaggaagaggtttggagataaaaagttggcaaaaccgaagccagtcaacccatcg
tttctgtcttcaccacaaacatcttcttcgttatcatcaacagtgtcatcatcatcatca
ctaccttcgtcatcatcatcatcaacagcaacaacatcgacgacagcttcattttcagca
tttctatcatctacgtcatcgtcgttatcctcaaaaaccacttcctcccccttaccacca
tcatcgagatcatcatcatcatcgagatcatcatcgtcgtcatcatccctattgcgcaat
ggaaaatttaacggaacggcactgtttgatgacgctattcgtcacgtgatcagcggaata
tatggcgatggtagtgatgatgatggtggtggtggtgatgatgatgacaatagtaagacg
acgaagatcataaactgtcaaacggtgaacaagaatgtgatgccatccagccaactactc
tctctgctgaatgccaggaacacttcgctacgtcctgcaagcgccgatgcagaagacgat
gacgctgacaacaacaacaacaatgataataataataacaacaataacaacataaatctc
gctagcaacaatcccagcaacaatttaaccaacgacagcagtttctcagatgtttaccgg
tccaaatcagccacagcaatcggcagcagcagcagcgccactgaggacccaggccacttt
ggccttgaacttgccgccgagataaaaagatttgtaaacagaagcacgtacagcgactgc
acacatcaggcgagttccgagcaactggtgaagtactttaaaaataaaatccatccatcc
cagtcggccatctttaaggagattttgaagagggtttgctcttttaagaaggtccaaggc
gtcggggttttttatattaaaagtggatttaagtcttga
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integrated database retrieval system
