Helobdella robusta: HELRODRAFT_111430
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Entry
HELRODRAFT_111430 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
hro
Helobdella robusta
Pathway
hro00260
Glycine, serine and threonine metabolism
hro00270
Cysteine and methionine metabolism
hro00450
Selenocompound metabolism
hro00670
One carbon pool by folate
hro01100
Metabolic pathways
hro01230
Biosynthesis of amino acids
Module
hro_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HELRODRAFT_111430
00270 Cysteine and methionine metabolism
HELRODRAFT_111430
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HELRODRAFT_111430
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HELRODRAFT_111430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hro04147
]
HELRODRAFT_111430
Enzymes [BR:
hro01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
HELRODRAFT_111430
Exosome [BR:
hro04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HELRODRAFT_111430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
20195265
NCBI-ProteinID:
XP_009016908
JGI:
Helro1_111430
UniProt:
T1EFB3
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MSCQTETKDDKSCASRNCNNHRSHTDHTATDHTTAPATKETQTADTYTKIINNKDHHGLD
LVKKCSCADDDPFGTFPHFATTVIHAGQNPKQWNCRAVVPLISLSTTFQAEEPGAEGKFE
YVRAGNPTRKVAETCVAAIENGKHCFLYASGLAATVNIFHLLKGGDHVICMDDVYGGTNR
YINKVLVTMDIEATFVDATEPANVKQALKPNTKMLWLETPTNPTLKVVDIEAASAVAHQQ
PGVIVVVDNTFMSSYFQRPLDLGADVSFQSLTKYMNGHSDVLMGSLTTNNDELAEKLKFL
QNALGAVPSPFDCYMLNRGLKTLALRMRQHMKNGLQVARYLQDNPRVEKVIHPGLPSHPQ
HAIAKKQCKGYSGMITFSIKGGREEACLFLKSLKVFSLAESLGGYESLAEHPALMTHASV
SVEDRMKLGITDSMIRLSVGLEDVEDLIEDLDEALMKAVPIVRN
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtcaaacggaaaccaaagacgacaaaagttgtgctagcagaaactgcaacaac
caccgcagccacaccgatcacacagcaaccgaccacacaacagctcccgccacaaaagag
acgcagacagcagacacgtacacaaaaatcatcaacaacaaagatcaccatggtctggac
ttggtcaaaaaatgttcatgcgccgacgatgatccttttgggaccttcccccactttgcc
acgacggtcatacacgccggacaaaacccgaaacagtggaactgcagggctgtggtgccc
ctcatctccctatctaccaccttccaagctgaggaaccaggggccgagggaaaatttgag
tatgtacgtgctggcaatccgacgaggaaagttgccgagacatgtgtggcagcaatcgag
aatggaaaacattgtttcttatacgccagtgggctcgctgctacagtcaacatattccac
ttactgaaaggtggtgatcacgtgatatgcatggatgacgtctacgggggtaccaatagg
tacattaacaaggtcttagtaacaatggacatcgaggcgacattcgtcgacgccactgaa
ccggcgaacgttaagcaagcactcaaacctaacaccaagatgttgtggttggaaacgccg
acaaacccgacgttgaaggtggtggacattgaagcggcttcagcagtggcccaccagcag
ccaggtgtcatcgtcgtcgtcgataataccttcatgtcttcatacttccagagaccgctt
gacttaggagcagacgtttctttccaatctctgaccaaatacatgaatggacattcagat
gttctgatgggatcactgacgacgaacaatgatgaattggctgaaaaactgaaatttctt
caaaatgctctcggggcggtgccctctccatttgattgctacatgttaaacaggggcttg
aagacgttggcactgcgtatgaggcagcatatgaagaatgggctgcaggtggctaggtac
ctacaggacaacccaagagttgaaaaagttatacatcctggcctgccaagccacccacaa
cacgccattgccaagaaacagtgcaaaggttacagcggcatgatcacgttcagcatcaag
ggcggtcgcgaagaagcttgcctatttcttaaaagtctcaaggttttttcgttagcagaa
agtcttggagggtatgaaagtttagcagaacatccggctcttatgacgcatgcatccgta
tccgttgaagataggatgaagttgggaatcacggatagtatgattaggctgtcagttgga
ctggaagacgttgaagacctcattgaagatttagatgaagctcttatgaaagccgttccg
atcgtgagaaattga
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