Helobdella robusta: HELRODRAFT_112087
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Entry
HELRODRAFT_112087 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
hro
Helobdella robusta
Pathway
hro03030
DNA replication
hro03410
Base excision repair
hro03420
Nucleotide excision repair
hro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HELRODRAFT_112087
03410 Base excision repair
HELRODRAFT_112087
03420 Nucleotide excision repair
HELRODRAFT_112087
03430 Mismatch repair
HELRODRAFT_112087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hro03032
]
HELRODRAFT_112087
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_112087
DNA replication proteins [BR:
hro03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
HELRODRAFT_112087
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
HELRODRAFT_112087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
PTCB-BRCT
AAA_19
BRCT_2
AAA_16
RuvB_N
AAA_22
AAA_14
nSTAND3
AAA_30
AAA_5
RNA_helicase
AAA_33
AAA_17
AAA_18
AAA_7
NTPase_1
SPOUT_MTase
Motif
Other DBs
NCBI-GeneID:
20195321
NCBI-ProteinID:
XP_009018239
JGI:
Helro1_112087
UniProt:
T1EFG9
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MRHEGKENCMEGLVFVLTGVYESIDRDEMKSLIEKYGGKVTTNVSRNTKYLVVGRDAGAS
KLSKATELGTKQIDEDGLLELIGKLPGKKSKYEVQAEKDLKKEAMQSKPQSKTSSSASEM
TSSSSSSSSLPPAKIPTSSGIVTSSSSNSSQKIASFSSALSAAATTTTTTTNNNNNNNNN
NNNNNNNKNNSNLMWVDKYKPASMKQIIGQQGDKSQAKKLHMWLLNWHKNASKKPIFGRS
NDDGVGLKAALLSGPPGIGKTTTAQVVCQEAGFSYFELNASDTRSKKSLKEEVSEALNNH
TLVGFFTKSSSSSSPLNGKKHCLLMDEVDGMAGNEDRGGVQELIQLIKSSHIPIICMCND
RAHPKIRSLVNYCFDLRFMRPRVEQIKATMMSIAFKEGLKIPPHALNDIISSSNHDIRQI
LHNLNMWTVRDKSLSYEQLKADAGRAHKDMHFSPFDVCRKVFSMGEETSKMTLPDKSDLF
FHDYNIAPLFVQENYIQVTPYKARGSMSRHLKLLSKAADSISFGDLVDGYVRKQQHWSLL
PVQAVFSSVLPGEYMRGSIGAMIQFPSWLGKNSTTNKADRLLQELTLHTSLSISGNKVSV
NLDYIPALKYVLTKPLISENNNNNNNNNSIETVVNIMNSYNLLREDFDSLNELSTWNFNN
NNNNPFCNIDSKLKASFTRAFNKQNHLTPYSTTTLVKKSRKKAASSDDYDLDGDANDDED
GDGDNGEDDDDDLTADSMIKVKKPSTAAVSRGKQANLVDTLKKLKVQKGKKTSK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgcgacacgaggggaaggaaaattgtatggagggcttggtgttcgtcctaactggcgtc
tatgaaagcatcgatagggatgagatgaagtcgttgattgagaagtacggtgggaaggtg
acgacgaatgtcagcaggaacaccaagtatctggtcgtggggagggatgctggtgcctct
aagctgtccaaggcaactgagcttggtacgaaacaaattgatgaagatggattgctggag
ctcatcggaaagttgccagggaagaaatcaaaatacgaagtgcaagccgagaaagatctg
aagaaagaagctatgcagagtaaaccccaatcaaagacatcatcatcagcatctgaaatg
acgtcatcatcgtcgtcatcgtcatcattgccaccagccaagataccgacttcatcagga
attgtgacatcatcatcatctaactcgtcacaaaaaattgctagtttttcatcggctctt
tcagctgcagcaactactactactactaccaccaataataataataacaataacaataat
aataataacaacaacaacaataaaaataatagtaatttaatgtgggttgacaagtacaag
ccagcaagcatgaagcagatcattggccagcaaggtgacaagagccaggctaagaaactt
cacatgtggctacttaactggcacaagaatgcttctaagaagcctatatttggccgatca
aacgacgatggtgttggcttgaaggcagctctactttcaggtcctcctggtattggaaaa
accacgacagcccaagtcgtctgtcaggaggcggggttttcctacttcgagttgaacgcg
tcagacaccagatcaaaaaaaagtctcaaagaggaagtttcagaggccctcaacaatcac
acccttgtcgggtttttcacaaaatcgtcgtcatcgtcgtcgcccttgaatggcaagaag
cactgcttgctgatggatgaggttgacgggatggctggcaacgaggacagaggaggagta
caggagttaatccagttaatcaagtcctcccacattcctataatttgcatgtgcaatgac
agggcccatcccaagataagaagcctagttaactactgcttcgacctcaggttcatgagg
ccgagggtcgaacagattaaggccacaatgatgtcgatagcctttaaagaggggttaaag
attccgccccatgccctcaatgacatcatatcctcatccaatcatgatatcagacagata
ctccataacttgaacatgtggacagtcagagataaatctctctcctatgagcagttgaag
gcagacgcaggcagggcacataaggacatgcatttcagtccatttgatgtgtgtcgcaaa
gttttttcaatgggagaagagacgtcaaagatgaccctcccagataagagtgacctcttc
ttccatgattacaacattgcaccactcttcgttcaagagaattatatccaggtgacgcct
tataaggctagaggcagtatgtcgaggcacttgaaactgctgagcaaagctgccgacagc
atctcgtttggcgatctggtggacggctacgtccggaagcaacaacattggtcactactt
ccggttcaggctgtgtttagtagcgttcttcctggcgagtatatgagaggtagcattgga
gctatgatacaattcccatcttggttgggaaaaaactcgacgacgaataaagcagataga
ttgctgcaagagttaacgctgcatacaagcctgagcatatcaggtaataaggtatcagtg
aacttggactacataccagcgctcaaatacgttctgaccaaacctctgatatccgagaac
aacaacaacaacaataataataatagcatagaaactgttgttaacattatgaatagttac
aacctactaagggaggacttcgatagtttaaacgaattgtcaacttggaattttaataat
aataataataatccgttttgtaatatcgattcgaagttgaaagcttccttcacaagggca
ttcaacaagcagaaccaccttacaccatattccaccaccactctggtgaaaaaatcccgc
aaaaaagctgcctccagtgatgattatgatctcgatggtgatgctaatgacgatgaggat
ggggatggagataatggagaagatgatgatgatgatctgactgctgattctatgatcaaa
gttaaaaagccgtcgactgcagctgttagcagaggcaagcaagccaacttggtggacact
ttgaagaagttgaaagtacaaaaaggaaagaaaacctcgaaatga
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integrated database retrieval system
