Helobdella robusta: HELRODRAFT_112113
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Entry
HELRODRAFT_112113 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_112113
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
HELRODRAFT_112113
Factors involved in mRNA localization
Other mRNA localization factors
HELRODRAFT_112113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
BP28CT
NinB
Motif
Other DBs
NCBI-GeneID:
20195323
NCBI-ProteinID:
XP_009018266
JGI:
Helro1_112113
UniProt:
T1EFH1
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MDKITLNDAMQNVDVLDELPLPDQQPCIDAAPLSIHYQVNKHTNFEDRGAFVTGMARYIE
EATVHAKLNECLEEGEGYAIMLYTWRCCSRALPQIKSNEQPNRVEIYEKTVEVLGPEVQK
LMNLMYFQRACISKFSDEVKRLCHKEKKNDFVSEAYLLTLGKFINMFAVLDELKNMKSSV
KNDYSAYRRAAQFLKVMSDPNMLQESQNLSMFLATQNKIRDMLRQAVQEVPGFEDLICEV
VNLAVYLYENRMYLLPSEKHMLVKVMGFGLFILDSRELKDVSIYKLDNKKKLNLAKIDRI
FKQIEVVPLFGDMQIAPFNYIKTSLNFDSSKWPLCTSAQISPQAVLLPSLEMMREEHVRY
ISELARHSNEVITTSRELTRNDEENRKLTTLALQGLQLLSSWNSRIMELYSWKLLHPTDH
HQNRDCPQDAEEYERSTRYNYTSEEKYALIEVIGMIKGLQVLMLRMEAVFMDAIRKNVYA
ELQDFVQIQLRDPLRKAIKNKKDLIKSIIVSVRETCADWLRGMEPQDDPALRGKKDDDNF
KIKVPRRNVGPSSTQLYMARTMLESLLSDKGGGKKTLRKEVDINHLALIDQFHKNSFFWP
YLLGFNQTLHECCELSQLWYREFYLEMTMGKKIQFPIEMSLPWILTDHILETKEPSMMEY
VLCPLDLYNDSAHYALHRFKKQFLYDEVEAEVNLCFDQFVYKLSDQVFLYYKHWAGSIML
DKKFRLECAKLSVKIPYPVANRYHTLLKQRHIQLLGRSIDLNRLVSQRINASLQKSLDYA
ISRFESGDLTGIVELEALIECNRLAHSLLAKHLSLNDFDSMFREANHNVSAPYGRITLHV
FWELNYDFLPNYCFNAATNRFVKTAMSFSAQITRDKPPSTSVQFLWGTKHLSTSFNAIFS
LYNNFVGYPHFHVVARLLGYQGIAVVIEELLKIVKNLIQGTLMEYVKTLRSVMPQVCKLP
RYDYGSPGALNYFFAQLTNIIQYPEMRTDMFQVFREIGNAILFCLLVEQSLSQEEVGDLK
HAAPFQNIIPKPFIPPKEGENKKDREAELKAMMKLLEAKYAALQVVPVISKLGTGRQADI
ATDGDLLTRERLCCGLSVFEIVLTRVRSYLEDGIWSGAPPGILGAPTPSPANGVMFVDEC
VEFHRVWSAVQFVFCMPVGENEFTIEQLFGEGFNWAGCAIIALLDQQRRFEALDFSYHLL
KMNRVDMKDDVIKGTSLKKMADRIRKFQILNSQIFATLNKYMKSCESTAETTPMEHVKCY
QPPVPQSINVNI
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggataaaataacactaaatgacgccatgcaaaatgttgacgtcctggatgaacttcct
ctgccggatcagcagccatgcattgacgctgctcccctttccatacactaccaagtcaac
aagcacactaactttgaagatcggggtgcatttgtcaccgggatggccaggtacattgag
gaggccactgttcatgccaagctgaatgaatgtctagaagagggggagggatatgccata
atgttgtacacatggaggtgttgttctagggctctacctcagataaagtcaaacgagcag
ccgaaccgtgttgaaatttacgaaaagactgttgaagttcttggccctgaagttcagaaa
cttatgaatctgatgtattttcagagagcttgcatcagtaagtttagcgacgaggtaaag
agattatgtcataaggagaagaaaaatgactttgtatctgaagcttatctattgacgctg
ggtaagttcattaacatgtttgctgtgttggatgagctgaaaaatatgaagtcttctgtt
aagaatgattattctgcctataggagagcagcccaatttctgaaagtaatgtcagatccg
aatatgttacaagaatcacagaacctctcaatgttcctggccacacagaataagatcagg
gatatgttgagacaggctgtgcaagaggtaccaggatttgaagacttgatatgcgaagtt
gtcaacttagcagtctatctctatgagaatcgcatgtacctgctgcctagtgagaaacat
atgctcgttaaggtaatgggatttggattgttcattctggatagtagggagctgaaggat
gtatccatctacaaattggataacaaaaagaaactcaatcttgccaagatagataggata
ttcaagcaaatcgaggttgtaccattatttggcgacatgcagatagccccattcaactac
atcaagaccagtcttaacttcgattcttcaaaatggccgctctgtacgtctgcccaaatt
agtccgcaggcagtactgctgccatccctggagatgatgagggaggagcatgtcaggtac
attagtgaactggccaggcatagtaatgaggtgataacgacgtccagagagctaacaaga
aatgatgaagagaatagaaaactaacaaccctggctctgcaaggattgcagttattatca
tcgtggaattctagaataatggaattgtactcgtggaagttactgcacccaactgaccat
catcaaaatcgggactgccctcaggatgctgaggaatatgaaaggtcaaccaggtacaac
tatactagcgaggagaagtatgccctgatagaggtcataggtatgattaaaggtctgcag
gtactgatgctacgcatggaggcagtcttcatggatgccatacgcaagaatgtctatgcc
gaacttcaggattttgtgcaaattcagttgagagatcctcttaggaaggctatcaagaat
aagaaggatctgattaaaagcatcatagtatcagtccgggagacgtgcgctgattggttg
agagggatggaaccacaggacgaccccgccctgcgcggaaaaaaagacgacgataacttc
aagattaaggtgcccagaaggaatgtcggaccttccagcacacagttatacatggcacga
accatgttggaatccttattgtcggacaagggtgggggcaagaagacccttcgcaaggag
gttgacatcaaccatctggcactcattgaccagtttcataagaattccttcttctggccc
tacctgctgggctttaatcagactctgcacgaatgctgcgaactctcccaactctggtac
cgagagttctacctggagatgacgatgggcaaaaaaatccagttcccaatcgaaatgtcc
ctgccctggatactgacggatcatatcctcgaaaccaaggaaccctccatgatggagtac
gtgctctgccctcttgatttgtacaacgacagtgcacattacgccctgcaccgattcaaa
aaacaattcctctacgatgaagtcgaagcagaggtgaatttgtgcttcgatcagttcgtc
tataagctgagtgatcaggtctttctctactataagcattgggctggaagcatcatgctg
gacaaaaagttccgactcgagtgtgccaaattatcagtcaaaattccatacccagttgcg
aataggtatcacacccttcttaagcagaggcatatacagttattaggcaggtcgatagat
ttgaaccgcctggtgtcacaacgcatcaacgcctccctccagaaatctcttgattacgcc
atcagcagatttgaaagtggcgacctcactggcattgtggaactagaggctctgatagaa
tgcaaccgcctagctcactcgctattggctaagcacctatcactcaatgattttgactcg
atgttcagagaggccaatcacaatgtctcggccccctacggtcgtataactctacatgtg
ttctgggagttgaattatgatttcctgccgaattattgttttaatgccgctactaacaga
tttgtgaagaccgccatgtctttctcggctcagataactcgagacaagccgccaagtact
tctgttcagttcctctggggtaccaagcaccttagcacctcgttcaacgccatcttctct
ctgtacaacaacttcgttggctaccctcactttcacgtcgttgctcgcctgcttggctac
caggggatcgccgtcgtcattgaagaacttttgaagatcgtcaagaatttgatccaggga
acgctgatggagtacgtgaagactttgagatccgtcatgcctcaggtctgcaagctcccg
agatatgactacggatcgccaggtgccctgaactatttcttcgcccagctgacgaacatc
attcagtatccggagatgaggactgacatgttccaggtctttcgcgagatcgggaatgct
atactgttctgcttactggttgaacagagtttgtcgcaggaagaagtgggcgacctaaaa
cacgcagcacctttccagaacatcatccccaagccattcataccaccaaaagagggcgag
aataagaaggaccgagaagcggaactgaaagccatgatgaaacttctcgaagccaagtac
gccgctcttcaagtcgttcctgtcatttcgaaacttggcaccggtcgtcaggcggacata
gccaccgatggcgacctcctgacccgcgagcgcctctgctgtggcctctcagtatttgag
attgtcctcacgagggtacggtcctacttggaggatggcatctggtccggcgcaccgcct
ggcattctcggtgcccccactccgagccctgccaatggggtgatgtttgttgacgagtgc
gtggagtttcatagggtctggagtgctgtgcagttcgtcttctgcatgccagtcggagag
aatgagttcactattgagcagttgttcggagagggcttcaactgggcagggtgcgccatc
atagccctgttggatcagcagagaagattcgaggccctggacttctcctaccacctactg
aagatgaacagggtcgacatgaaggatgacgtcattaagggaacttcgctaaagaagatg
gccgaccggatccggaagtttcaaatcctgaacagtcagatcttcgccacgctgaacaag
tacatgaaatcctgtgagagcactgctgaaactacgccaatggagcatgtaaaatgctac
caaccgcctgtaccacaatctatcaatgttaacatttaa
DBGET
integrated database retrieval system
