Helobdella robusta: HELRODRAFT_112326
Help
Entry
HELRODRAFT_112326 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
hro
Helobdella robusta
Pathway
hro04120
Ubiquitin mediated proteolysis
hro04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
HELRODRAFT_112326
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
HELRODRAFT_112326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hro04121
]
HELRODRAFT_112326
03036 Chromosome and associated proteins [BR:
hro03036
]
HELRODRAFT_112326
Ubiquitin system [BR:
hro04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
HELRODRAFT_112326
Chromosome and associated proteins [BR:
hro03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
HELRODRAFT_112326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
WDR90_beta-prop_4th
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_like
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_SPT8
F-box
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_WDR11_2nd
PEP5_VPS11_N
F-box_5
WD40_2
PARG_cat_microb
Motif
Other DBs
NCBI-GeneID:
20195339
NCBI-ProteinID:
XP_009018598
JGI:
Helro1_112326
UniProt:
T1EFI7
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MDYSEQAMESTVIEDPNSHLFLKNDKNKYSQLVCQQQTDCLKLFLTWNSNQQVQFVQELI
QRMDHHQHGEIDTFLQPILQRDFISALPDRGLDHISEKILSYLDSKSLCSAELVCKEWYR
VIADGGIWRKLIEKMVRTNTLWFGLAQRKGWMNYLFRPKPGESHKEHLFYRRLFNEIIKD
IDTIDNNWRTGNVALRRILCHSVASKGVYCLQYDDSKIVCGLRDNTIKVWNKSTLECVRS
LRGHTGSVLCLQFSDDMIISGSSDATVRVWSITTGEIINILIHHSEAVLHLRYSEEGIMV
TCSKDRSIAVWDIISPKEINLRRVLLGHRAAVNVVDFDLNYIVSASGDRTIKVWNTTTCE
FVRTLNGHKRGIACLQYREKLIVSGSSDNTIRLWDVECGACLRILEGHEELVRCIRFDNK
RIVSGAYDGRIKVWDLQAALDPRSPSGTLCLRTFVEHTGRVFRLQFDEFQIVSSSHDDTI
IIWDFMNEVSISGSPTTSGGHGNLGQGHGNLGQGANNGSSSNAPDSALVVASAISNVNQP
TGGINSNR
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggattattccgaacaagcaatggaatcaacggttattgaagaccccaattcacatttg
tttcttaaaaatgacaagaacaaatactcccaacttgtctgtcagcaacaaactgattgt
ttaaaattatttctaacctggaactcaaaccagcaagtgcagttcgtgcaagaactgatc
caacgtatggaccaccatcaacatggcgagatcgacacattccttcaacctatactccag
cgagattttatttcagcactaccagatcgaggacttgatcacatctctgaaaaaattctt
tcgtaccttgactcgaagtcattatgctcagcagaactcgtctgtaaggagtggtatcga
gtgattgctgatggtggcatatggaggaagttgattgaaaaaatggtcagaactaacaca
ctctggtttggtctggcccaaagaaaaggatggatgaattacttatttcgaccaaagcca
ggcgagtcacacaaggagcatctcttctacaggagactcttcaatgaaatcatcaaagat
atcgatacaatagacaataactggaggacaggcaacgtggcgctgagacgaatcctctgt
cacagcgtggctagcaagggggtctactgtctacaatatgatgacagcaagattgtctgt
ggcctcagggacaatactattaaagtttggaacaagtcaacattagaatgtgtcaggtca
ctgagaggtcacacaggttcggtgttgtgcttgcaattcagtgatgacatgatcatatct
ggctccagtgacgcaactgttagagtctggtccataacgactggggaaataataaacatc
ctgattcatcatagtgaagcagtcctgcatctgaggtacagtgaagaaggcatcatggta
acatgctccaaggatcgatcgatagccgtgtgggatataatctcgcccaaggagattaac
ctacgcagggttctactaggtcaccgggctgccgtcaatgtcgtcgactttgatctcaat
tacatcgtctctgcttctggggataggactattaaggtatggaacacgacgacgtgcgag
tttgtacgaacgctgaacggccacaagcgtgggatagcctgcctgcagtaccgggagaag
ttgatcgtcagcggaagttccgacaacacgatcaggctgtgggatgtggagtgtggggca
tgtttgcggattctcgagggccacgaggagctagttaggtgcatcaggttcgataacaag
aggatcgtcagtggggcttacgatgggaggataaaagtttgggatttacaggcggcactc
gaccctcggtccccatccggcactctctgtcttaggacatttgttgaacacaccggccga
gtattccgactccagtttgacgaattccaaattgtgagtagctcacacgacgacacgatt
attatctgggatttcatgaacgaagtatccattagcggctctcctacgacctcgggaggt
cacggtaatctgggtcaaggccatggcaatctaggtcagggcgccaataatggttcttcg
tccaatgctcctgattctgctcttgttgtggcttccgctatttccaatgtcaatcagcca
actggcggtataaattccaacaggtag
DBGET
integrated database retrieval system