Helobdella robusta: HELRODRAFT_113568
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Entry
HELRODRAFT_113568 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_113568
Enzymes [BR:
hro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HELRODRAFT_113568
Spliceosome [BR:
hro03041
]
Complex C
Other components
Complex C specific factors
HELRODRAFT_113568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
HA2_N
AAA_19
AAA_22
DUF4867
AAA_14
DUF717
DEAD
nSTAND3
AAA_11
NPHP3_N
DUF6639
Motif
Other DBs
NCBI-GeneID:
20195439
NCBI-ProteinID:
XP_009022157
JGI:
Helro1_113568
UniProt:
T1EFT7
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MSVEDLKKFMKTLSKEMQRYIKGHAVLANKENILKTVAASQVSIIFGNAGMGKTTQIAQY
IYEEYKPDRMIVCTQPRKAEAVYVARRVANDMGSSLGQLVGYRVRADWKLNSDTRILFIT
DHELVNEWFADELFSRYFCIILDEVQERTIYTDLLLWSLKQNLSRRPDLKVIIISTDTDK
LQYDYVGYFKNFNPTQLKLIDNIFPVGVIYKAVAVSENHVKHACLKALEFHREEEVVDGA
KDILVFLATHSEIEEAIDEIKSKNINNLLPLGLHEHMRAEDIQDVFAPTMNGFRKVVFAT
NVAQASLTVPEIICVIDSGKERMRNLGTGNKNSYRFQKISSYSAEERRKLAGRNDAGICY
RLYSAKDLDSNPSDDMVEVLTDRLNGFILKLMSHGINKFECLEFFKKPPTEPIEESFKSL
TAIGAIDNNNQLTKLGKLLAEINLNPKHAEFILEGIKEHLGYESLVISVLSSFEKFQLMK
LDKNTKCNMGLHISIFFDNFGDMITWLNIYQDFLYGQKFCRDSWCDYYLVNSKTI
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtggaagatttgaaaaaattcatgaagacgttgagcaaagaaatgcagaggtac
atcaaaggtcatgcggtgctcgctaataaagaaaacatcctgaagacggtagccgcctct
caggtgagtatcattttcggcaatgcaggcatgggcaagacgacacaaatcgcccaatac
atctacgaagaatacaaaccagatagaatgattgtgtgcacgcaaccgagaaaagccgaa
gcagtatacgtggccagaagggtagccaacgatatggggtcatctttgggtcaacttgtg
ggttatcgggtgagagcggactggaaactgaacagtgacacgcgaattttattcatcacc
gatcacgagctggtaaacgaatggttcgcagatgaattattttctcgttatttctgcatc
atcttagacgaagtgcaggaaagaactatttacacggatttattgctctggtcgctcaaa
caaaatctttcgcgacgtccagacctcaaagttattatcatttctacagacactgacaaa
cttcagtacgactacgttggatactttaaaaattttaacccaactcagttaaaattaata
gataacatctttcctgttggagtgatttacaaagctgttgcagtttcagaaaatcatgta
aaacacgcatgtctaaaagcactggaatttcatagagaggaagaagtggtagacggtgca
aaagatatacttgtcttcctggcaactcattctgagattgaagaggccattgatgaaata
aagtctaaaaatattaataatcttctgccattgggtctccacgaacacatgcgagcggaa
gacatacaggatgtattcgcgccgacgatgaatggtttcaggaaagttgtgttcgctacg
aatgttgcccaagcatctttgacagtgcctgaaatcatctgcgtaattgatagtggcaaa
gaaagaatgagaaatcttggcactggtaataaaaacagttaccgttttcagaaaatttcg
agttacagcgctgaagagcgtagaaaattagctggtagaaacgacgctggcatatgttat
aggctatattccgcaaaagatttggattcaaatccatcggacgatatggttgaagtttta
acagaccgactaaatggatttattttaaaacttatgtcacacggaattaacaaatttgaa
tgtttggaattctttaaaaaacctccaacagaaccaatagaagaatccttcaaatcatta
acagcgattggggccattgacaataacaatcaactgacaaaacttggtaaattattagct
gaaataaatttaaatccaaaacacgcagaattcattctggagggtattaaagaacacctc
ggttacgagtctttggttataagcgtgttgagttcctttgaaaaatttcagttgatgaaa
ttggataaaaacacaaaatgtaacatgggtttgcacatatcaatattttttgataatttc
ggcgatatgataacgtggctgaacatttatcaagattttctttatggacaaaagttttgc
agggatagctggtgtgattattatctcgtcaattcgaagacaatt
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