KEGG   Helobdella robusta: HELRODRAFT_113751
Entry
HELRODRAFT_113751 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
hro  Helobdella robusta
Pathway
hro03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HELRODRAFT_113751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hro03400]
    HELRODRAFT_113751
Enzymes [BR:hro01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     HELRODRAFT_113751
DNA repair and recombination proteins [BR:hro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     HELRODRAFT_113751
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C zf-CCHH LIG3_BRCT BRCT_2 mRNA_cap_enzyme RNA_ligase MCM4_WHD DUF3802
Other DBs
NCBI-GeneID: 20195461
NCBI-ProteinID: XP_009023393
JGI: Helro1_113751
UniProt: T1EFV9
LinkDB
Position
Unknown
AA seq 1013 aa
MTSFLCDYAKLGTAGCKKCKVKLEKGALRLAKVTPNPFTDGEGEMKQYFHPKCLFETFTK
ARSTTKVVDSPNDLQNYDSLKAEDQNLINNLIDDLSKVRSTPKKTATKRKKPKSEKKKSL
PSRLSTSAVSSTSTKSSPTTLSPEASSQIKTSDKNLSKADDNMEKLKERDNSFIEFRKLC
AQIAEQSSHTMKTASVSEFLRNGTSGTNYPCDAYLLLKVLLPGVVKSVYNMDDKPAVKHF
SQGCYSKSFYSLFLEEMMEHLEDGDVSDTISAFFGKSSNLKPQLKSMLSMQEVDAFLSEL
TKYTKEEDQLKCLTKITKRLCTSNDLKTFIRLVKHDLRINCGSKLILDGLSPKAYEAFKA
SRDLKKVVDMILNVKCNEGKVKVQLSLMTPVQPMLAEACKSVDVAFKKCPNGMYAEIKYD
GERVQLHKQGDHYQYFSRSLKPVLDHKVKHLKDFIPLAFPGVSDLVLDSEVLLIDNKTGK
PLPFGTLGVHKKSAFKDANVCLFIFDCLHYNGQSLLNRPLIERRDILHKNMTQVNNHVMF
SEMTHIMEEDDLVDLMMRVFREGLEGLVLKDINGIYEPGMRHWLKVKKDYLGQGCMADSA
DLVVLGAYFGTGSKGGMKSVFLMGSHDEDTKKWCTVTKCGSGLDDATLNKLQTSIKMVKI
SKDAAKIPKWLNVSKKLLPDFVVLDPKESPVWEIIGTEFTLSDVHTAGGISIRFPRIQNI
RDDKTYKEATDVKRLKLLYKKSKEHSKIEDMFSGRATKKRGKQKDRDGDEGEGRAKEEKE
EGDEEEEDDDRVTDEPGSKDAKKDYNDDGDKDDSTSKHETNYDNKSGADGVAGSSKENSC
KNDTNKLNRTTSSSCSSNQTSYRPACRYGSNCYQKSFLHRIHFKHPKSNDDEDDDDARNN
DDGGGGDDKFKLLPNIFVGLKFSIPSLYTPSTAPSTTSSITSSLKDEEKKMLKRYITAYG
GDVIDDDVIRDECDYVILHDSDVKNISKDVSKDVNSKYITPYKVWQIIKNGFN
NT seq 3042 nt   +upstreamnt  +downstreamnt
atgacgtcttttttgtgcgattatgccaaattggggacagcgggctgcaagaaatgtaaa
gtaaagttggagaagggggccctcaggttggctaaagtaacgcccaatccattcacagat
ggggagggtgaaatgaagcaatatttccatccgaaatgtttgtttgaaacgttcacgaag
gccaggtcaaccactaaggtcgttgactcgccaaatgacttacaaaactatgacagcttg
aaagctgaagatcaaaatttgatcaacaatctcattgatgacctttcaaaagttagatca
accccgaagaagactgccaccaaaagaaagaaaccaaaatcagagaaaaaaaaatctctc
ccctcaaggctgtcaacttcggcagtttcatcaacatcaacaaagtcatcaccaacaaca
ttatcaccagaagcatcatcacaaattaagacctcggataaaaatctctcgaaagcagat
gataatatggaaaagttgaaggagagagataattcatttatagagttcagaaaattgtgt
gcccagattgctgaacagtctagtcacaccatgaaaactgcttccgtctctgagttcctg
agaaatggaacaagtggaacaaattacccatgtgatgcttatttgctgttgaaggttctg
ctaccaggtgttgtaaaatctgtgtacaatatggatgacaaaccggcggtgaaacatttc
agccagggttgttattcaaaatctttctattctctttttttagaggaaatgatggagcac
ttggaggatggtgatgtctctgatactatatccgcgttttttggtaaatcttcaaacttg
aaaccgcagttgaagagtatgttgtccatgcaagaggtggatgctttcttgtctgaactg
actaagtacaccaaagaagaggaccagctgaaatgtctcacaaaaattactaagaggttg
tgcacatcaaatgatctgaagaccttcattaggctggtgaaacatgatctgagaatcaac
tgtggatctaaattgattctcgacggtttgagccccaaagcttatgaggccttcaaagcg
tcgcgagacctgaagaaggttgttgacatgatcctgaatgtcaagtgcaacgagggcaag
gtcaaagttcaattgtccttaatgacccctgtgcaaccgatgctggcagaagcctgcaag
tcagttgacgttgctttcaagaagtgtcctaatggtatgtacgctgagataaaatatgat
ggggaaagagtacagctacacaaacaaggtgaccactaccagtacttcagcagatctttg
aagcctgtcctcgaccacaaggtgaagcacctgaaagacttcatacccctggcctttcca
ggtgtcagtgatctcgtcttagatagcgaggttctactcatcgacaacaaaacgggcaag
cccctaccctttgggactttgggagtgcacaagaaaagtgcattcaaggatgcaaatgtc
tgtctgttcatctttgactgccttcattacaatgggcagagtcttctaaacagacccttg
atagagagaagggatattctacacaagaacatgacgcaagtcaacaatcacgtcatgttc
tcagaaatgactcatattatggaagaggatgaccttgttgacctgatgatgagggttttc
agagaaggactggaagggcttgtactgaaagatatcaatggtatatacgagcctggcatg
aggcactggctgaaggtgaagaaagattatctaggtcaaggttgcatggccgactcggct
gacctggtggtgctaggggcatattttggaaccgggtcgaaaggcggtatgaaatcagtg
tttctgatgggaagtcacgacgaagacacaaagaagtggtgcacggtgacaaaatgtggc
agcggcctcgacgacgccacgctcaacaagctgcagacgtcaatcaagatggtcaaaatt
agcaaggatgctgcgaagattccaaagtggttgaacgtttccaagaagctacttcctgac
ttcgtggtccttgatcctaaagaatcgcctgtttgggagataattgggacggagtttacg
ctgtctgatgttcatacagctggcggaatttccatcagatttcctcgcatacaaaacatt
cgcgatgacaaaacttacaaggaggctactgatgtaaagagactgaagctgttgtacaaa
aagtcgaaagaacattcaaagattgaagacatgttcagtgggagggcaacgaagaagaga
ggaaagcaaaaggatagggatggtgatgaaggtgagggtagggcaaaggaggagaaggag
gagggtgatgaagaagaagaagatgatgatagagttactgatgaacccggttcaaaagat
gcaaagaaggattataatgatgatggtgataaggatgatagcaccagtaagcatgaaaca
aattatgataataaatcaggtgcagatggtgtagctggtagcagcaaagagaacagctgc
aagaacgatactaataaactcaacagaaccactagcagcagctgcagcagcaatcaaacc
agttacagaccggcatgtcgctacgggagcaattgctatcaaaaaagtttcttacataga
attcatttcaaacaccccaaatccaatgatgatgaagatgatgatgatgctagaaataat
gatgatggtggtggtggtgatgataagtttaagctgctgccaaacattttcgtcggactt
aaattttccataccatcactttatactccatcaacagcgccatcaactacgtcatcaatt
acgtcatcgttgaaagacgaggagaagaaaatgttaaaaagatacatcacagcatacggc
ggtgacgtgatcgatgatgacgtcattcgtgacgagtgtgattacgtcatccttcacgac
agtgacgtcaaaaacatcagcaaggacgtcagcaaagacgttaacagtaaatatattaca
ccgtataaggtctggcagattattaagaatggattcaattga

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