Helobdella robusta: HELRODRAFT_114122
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Entry
HELRODRAFT_114122 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K13210
far upstream element-binding protein
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_114122
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_114122
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
HELRODRAFT_114122
Spliceosome [BR:
hro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
HELRODRAFT_114122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KhpA-B_KH
Motif
Other DBs
NCBI-GeneID:
20195494
NCBI-ProteinID:
XP_009024175
JGI:
Helro1_114122
UniProt:
T1EFZ2
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MPCFFTVIGKGGEQITSIQNECQCKVQFAPDAGGPQRQCMLSGPAVGVMKAKKIIDDVIL
KNQLISLGGDEVALEIMIPGNKVGLIIGKNGDTIKQLQERSGVKVAVIQDSTQPSDYEKP
LRISGNKLGCQKAREMVMELLNEHDKQNAGNTRPGGMGGAMGGGAGGYHGGAGGSKHNIE
IPVPRGLVGIVIGKGGEMIKKIQEESGAKVQFRPDDIDDNGPNRICHVYGHKQSNDIAVN
LIHDLIKTGMNRQNGGGMGGGGGGVPFATPFGNAPFPNGMIHPIPTDKCGLVIGKGGENI
KEINRISGAHAELVRDQNNANADPNTKRFRIQGTPEQVQHCIQLINEKAGLVTGPPMVGG
PVFGGLQGGPPMMSPYAPLNMQGPPGALVAPFPAQAQVLVPNQPMYNAPVPQAQYVSAAP
AQPAGATYAQQPTPLAPAGAAGAVPYGQQQPQQPPQQQQQPAAVYVDPTKGADPNAAAWA
AYYAQLYGGQQPASIQPAAGQQATVPQVQAIQAAPAVQGGHTQVAYATTQVLAAAAPVPA
AAQPQPNQPPNWTARLQPGLGRVLQSTRSAPSGSCCHASCWYATRAVTTMSLIRFLLAC
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtttctttacagtaattggcaaaggcggtgaacaaataacgagtatacagaat
gagtgtcaatgcaaagtacaatttgctcctgatgccggcggtccgcaaagacagtgcatg
ttgtctggtcctgctgtcggagtaatgaaagcgaagaagataatagacgatgtgatacta
aagaatcaattgatatcattgggcggcgacgaggttgccctggagatcatgatacccgga
aacaaagttggattgatcattggcaagaatggagatactattaaacagctgcaggagaga
agcggggtaaaagtagcggtcatacaggactcgacccagccgtccgattatgagaagcca
ctacgcatatcaggcaacaaactcggctgtcagaaggccagggagatggtcatggaactg
ttgaatgaacacgataagcagaatgctgggaataccaggccaggaggcatgggtggagcc
atgggaggcggtgctggcggctaccatggtggtgctggtggctccaagcacaacattgag
attccggttcctcgtggtcttgttggaattgtcatcgggaagggtggtgaaatgatcaag
aaaatacaagaagaatctggggccaaggttcaattccgaccggacgacatagatgacaat
ggtccaaacaggatatgccatgtgtatgggcataagcagagcaatgacattgctgtcaac
ctcatacacgatctcatcaaaactgggatgaatcgtcagaatggaggtggcatgggtggt
ggagggggcggcgttccctttgcaaccccctttggaaatgcaccattcccaaatggcatg
atacatccgataccgactgacaagtgtggattggtcattggaaaaggtggcgagaacatt
aaagagatcaatcgcatctccggagctcacgcggaactggttcgtgatcagaacaacgca
aacgccgaccccaacacgaagaggttcagaatacagggaacaccggagcaggtacagcac
tgcattcagctgatcaacgagaaggcaggactagtaacagggcctccgatggttggtgga
ccagtgtttggtggattgcagggtggacctcctatgatgtctccctatgcccctctgaat
atgcagggtccaccaggtgcgttagtagctccgttcccagctcaagcacaagttctcgtg
cccaaccaacccatgtacaacgctccagtgccacaggcacagtatgtcagtgctgcacca
gctcagcctgccggtgcgacctatgcccaacagcccacaccactagcccctgcaggggct
gccggtgctgtaccctatggacagcagcagcctcagcaaccacctcagcaacaacagcag
cctgctgctgtttatgtggatcctacaaagggagctgatccaaatgcagcagcttgggca
gcttactacgctcagttgtacggtggtcagcaaccggccagcatccagccagctgctggt
cagcaagctactgtaccgcaagtgcaggccatccaagcagccccagctgtgcaggggggg
catactcaagtggcatacgctacaacacaagttctagctgctgcagctcctgttcctgct
gctgctcagccacaaccaaatcaacccccaaactggacagccagactacagcctggcttg
ggcagagtactacagagcacaaggtctgcaccatcaggcagctgctgtcatgcaagctgc
tggtatgccacaagggcagtaaccaccatgtctttgattagatttcttcttgcttgctaa
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integrated database retrieval system
