Helobdella robusta: HELRODRAFT_115562
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Entry
HELRODRAFT_115562 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
hro
Helobdella robusta
Pathway
hro04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
HELRODRAFT_115562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hro04121
]
HELRODRAFT_115562
Enzymes [BR:
hro01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
HELRODRAFT_115562
Ubiquitin system [BR:
hro04121
]
Ubiquitin ligases (E3)
HECT type E3
HELRODRAFT_115562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
TRIF-NTD
Motif
Other DBs
NCBI-GeneID:
20195595
NCBI-ProteinID:
XP_009028377
JGI:
Helro1_115562
UniProt:
T1EG93
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MKLLNSAKSAREDRAIERNKVLAATKIQSVARGFLARCTFNKVIRLDLDSILQIPVNTND
EYKPALRPALEFFHAVERFLMVFKEQKDMQRFEHICRYILNSMSAEVLNKNVYASVALSK
ESLIQWINQLKRLLLISLQYFNVLKCDRVKDMKMITAMLHFQITFTSCSTWKFLNNSKNG
DQLKPGMEQLCKNCMGHITSNGLYSFLRTLLISGLCKSKPLLKPSMLTAIITIAIKPLMA
SEYSESLFVSFILEILSVPSLVHHIITMSAESLTLMMSQRIFSMTLTVLDERQNAKIIFH
ALEGNYALCLLANLIQLGNAEKEVMMTILMMMTTILMMMTMAMMMMLYVENKKSFLTHWH
PILGWFAQKTDPNLNEAMPAVIKQISELWNIRMIHLLFEPLFTFALSIEPAATTPAATAA
AATAATSFKISNNNDVVVAGSGFTGCNANLISDTCSACKVYMTSLSCLTQLKMEIMAGLC
FQDILLPRLWTLITHLGPQCGLKVFIEVLSGHTSSTTVGPQHPLFNLLQLACDMARHVMT
IVDEVEMYEQEYPFPMQMLMSISYFLNNFTYGSIASGYIDIKKAVSDELFVSTMSLLELL
HSRDCRRKFAHDGHWLIKDIKCKEFLNDLSHNKPIPTFLLHHMPHIIPHRERVALFRKFV
TKDKESLGVCNTPHSLAPASTVITVHRNRLVEDGYRQLGNLTSTALKGVIRVKFINEQGL
DEAGIDQDGVFKEFLEETIRRVFDPSLNLFKATGEQKLYPSPTSYLQESHLLLFEFVGRV
LGKAVYEGIVVDVPFASFFLSQLLGHTHSATYSSIDELPSLDPELYKNLTYIKHYQGDLS
DLDLTFSYNEDILGKVVTHELIPGGKMVSVTNENKISYLHLMAHFKMRVIIKDQSNAFIR
GFKSIVNSDWLSMFSGPELQKLISGDTDDIDLDDLRKNTHYYGGFHNNHKVIDWLWDILK
RDFNAEERRSFLKFVTSCSKGPLLGFAYLEPPFSIRCVEVSEDQDVGDTVGSVLKGFFNI
RKKDPVGRLPTSSTCFNLLKLPNYQKKSTLREKLRYSIASNTGFELS
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactcaacagtgcaaaaagtgctcgcgaggatcgagccatcgaacgaaacaaa
gtactggccgccactaaaatacagtcagttgcaaggggctttttagccagatgtacattc
aacaaggttataagattagaccttgattctatacttcagattccagtaaacaccaatgat
gaatacaagccagcattgagaccagctttagagttctttcatgctgttgaaaggttccta
atggtcttcaaagaacagaaagatatgcagaggttcgaacacatatgtagatacatactg
aactccatgagtgctgaggttctgaataagaacgtgtatgcgtccgtagcactgtcaaaa
gagagcttgatccagtggataaaccaattgaagagactactgttaataagtttgcagtat
ttcaatgtactgaaatgtgatagagtgaaggatatgaaaatgataacggcaatgttacac
ttccaaataacattcacaagctgctcaacttggaaattcttgaacaattcgaaaaatgga
gatcagttaaaacctgggatggaacagctatgcaaaaattgcatgggacacattacatct
aatggcttatattcatttctaaggactctattgatatctggtctgtgcaaatcaaaacca
ttgctaaagccgtcaatgctcactgccatcattactatcgccatcaagcccttaatggct
tctgaatattcagagagtttgttcgtttcattcatccttgaaattttatccgttccctct
ctcgttcaccacataattactatgtctgctgagagtttgaccttgatgatgtcacagaga
atcttttcaatgaccttgaccgtcttagacgagagacagaatgccaaaattatttttcac
gctcttgaagggaactatgctctgtgtctgctggctaatctgatacagctgggcaatgct
gaaaaagaggtaatgatgacgatcttgatgatgatgacgacgatcttgatgatgatgacg
atggcgatgatgatgatgctatacgttgaaaataaaaaatccttcctcacacattggcat
cctatcttgggctggtttgcccagaaaactgacccaaacttaaacgaagcaatgccagca
gtgattaagcagatctcagagctgtggaacattagaatgattcaccttctcttcgaaccg
ctattcacatttgccttatcaatcgaaccagctgctactacacctgctgccactgcagct
gctgctacagctgcaacaagctttaagataagcaataataatgatgtagttgttgctggc
agcgggtttactggctgcaatgcgaatttgatttccgatacgtgctctgcctgcaaggtg
tatatgactagtctgtcgtgtctaactcaactcaaaatggaaataatggctggactttgt
tttcaagacatacttcttcctcgtttgtggactttgattactcatttaggaccacaatgt
gggctcaaggtgtttattgaagtgttgtcgggccataccagttcgacgacggtgggtcct
cagcatccgttattcaacctactgcagttggcttgcgacatggctagacacgttatgact
atcgtagatgaggtggaaatgtacgagcaagaatatccctttccaatgcagatgctcatg
tcgatcagttatttcctcaacaacttcacgtacggaagcattgctagtggttatatcgac
atcaaaaaagcagtatcagatgagttattcgtctcgacgatgtctttgctagaacttttg
cattccagagattgtaggaggaaatttgctcacgatggccactggcttattaaagatatt
aaatgcaaagaatttttgaacgatctctcgcacaacaagcccataccgaccttcctactg
catcacatgcctcatattataccgcatagagaaagagtagccctgtttagaaaatttgta
acaaaagataaggaaagcttaggcgtgtgcaatacgccgcactcattagcaccagcatct
actgttataactgtacataggaatagacttgtggaggacgggtacaggcagttaggaaac
ttgacctcaactgccctcaaaggggtcatcagggtcaagttcatcaacgaacagggccta
gacgaagcgggcatagatcaggatggcgtatttaaagaattccttgaagaaactatacga
agggtttttgatccatctctaaatcttttcaaagccactggggagcagaagttgtacccc
tcgccaacgtcctacctgcaagaaagtcatctcctactgtttgaatttgttggtcgagtg
cttggtaaagcagtctatgaaggaattgtagttgacgtgccgttcgcctcattcttcctc
tctcagctcttgggacacacgcactcggccacctatagctcaatcgacgaactaccatct
ctcgaccccgaactctataaaaatctcacatacattaaacattatcaaggtgacctgagt
gaccttgacttgaccttttcatacaacgaagatatcctgggcaaggtcgtgacccatgaa
cttattcccggcggtaaaatggtgtctgtgacgaatgaaaacaagatcagctacctacat
ctaatggctcatttcaaaatgagagtcatcatcaaggaccaatcaaacgccttcattcgc
ggcttcaaatccatagtcaactctgactggttgagcatgttttcagggccggaactacaa
aaactcatatccggggacaccgatgatattgatttagatgatctgagaaaaaacacccat
tactatggtggcttccacaacaatcacaaagtcatcgattggctctgggacatcttgaag
agggatttcaatgcagaggagagaaggtcatttctgaagtttgtaacaagttgttcgaaa
ggaccactgcttggtttcgcttatctggagccaccgttctccatcaggtgtgtcgaagtc
agtgaagatcaggacgttggagacacggtgggcagtgtcctgaagggtttcttcaatata
agaaaaaaagatccagtcggtcggttaccaacttcatcgacgtgtttcaatctcctgaag
ctgcccaactatcaaaaaaagagtacgcttcgagaaaaattgagatattctatagccagc
aatacaggatttgagctatcttaa
DBGET
integrated database retrieval system
