Helobdella robusta: HELRODRAFT_116409
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Entry
HELRODRAFT_116409 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K14945
protein quaking
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_116409
Spliceosome [BR:
hro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
HELRODRAFT_116409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STAR_dimer
KH-I_KHDC4-BBP
KH_1
Motif
Other DBs
NCBI-GeneID:
20195648
NCBI-ProteinID:
XP_009030890
JGI:
Helro1_116409
UniProt:
T1EGE6
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MYVKSFRMDTNKIDSDINNNINNNINNNNITNNNNKNNNNLNHINNNDANNISEHCYVND
GDHNINNNNNNNNNNNNIINNYNDNINNVNNNNNKSHSTPDNINDSVTNSYIPTDDRDSN
NVTHNNNKYSINNHNNIINTNNKDSKTCKDNKTCRDNNIKDYKTCKDNHKSKDSKTCKDN
KTYNNISPDYLAQLLSDRKKLQTFSGLFIHLDKLLDNEIIKIRANLFHLPVPTSTDSDGK
LPEPIGETVSVSEKVLIPVHKYPDYNFVGRLLGPRGRTAKQFETDMECKIMIRGRGSLRD
VAKVDIKKLKTNQEFMNEDLHVLVTVEDTENRVHIKLRRAVEAIERFFIPAPEGEDCLKK
KQLMELAIINGTYRETKSSSSPPSSLSSPSLLSSSSSSQFLLSSLPPQGLATQFISR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtaaaatcattcagaatggatacgaacaagatcgatagcgacatcaacaacaac
attaacaacaacatcaacaacaacaacattacaaacaacaacaacaagaataacaataat
ttaaatcacattaacaacaacgacgccaacaacattagcgaacattgctacgtgaatgac
ggagaccacaacattaataataataataataataataataacaacaataatattataaat
aattataacgacaatattaacaacgttaacaacaacaacaacaaaagtcattcaactcca
gacaacattaacgacagcgttactaatagttacattcctactgacgatcgtgacagcaat
aatgtcacgcacaacaacaacaaatatagcatcaacaaccacaacaacatcatcaatacc
aataacaaagatagcaagacatgcaaagacaacaaaacatgcagagataacaacatcaaa
gattataaaacatgcaaagataaccacaagagcaaagatagtaaaacatgcaaagataac
aaaacgtacaacaatatatcgcccgattatttagcgcagcttttaagtgaccggaagaaa
cttcagacattcagtggtctgtttatacatctggacaagttactggacaacgagataata
aaaattcgcgccaatttgttccacttaccggtaccgacgagtaccgacagcgatggaaaa
cttccagaaccgataggagaaaccgtgtcggtatccgaaaaagtattgataccggtacac
aagtaccccgattacaacttcgttggtcggttattaggaccacgtggtagaacggccaaa
cagttcgagacggacatggagtgtaagattatgatccgggggagagggtctttgagagat
gttgcgaaggtggacatcaaaaagttgaaaaccaaccaagaattcatgaacgaggacttg
cacgtgttggtgacagtcgaagatacggagaacagggttcacatcaagttgagaagggcc
gtcgaagctattgaaagattttttattccggctcctgagggtgaagattgcctaaagaag
aaacagctgatggagttggccatcatcaacgggacgtacagagaaacaaaatcatcatca
tcaccaccgtcatcattatcatcaccatcattactatcatcatcgtcgtcgtcacagttt
ttgttatcgtcgctaccgccacaaggtctagcgacacaatttataagtaggtga
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