Helobdella robusta: HELRODRAFT_124544
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Entry
HELRODRAFT_124544 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
hro
Helobdella robusta
Pathway
hro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HELRODRAFT_124544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_124544
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HELRODRAFT_124544
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
HELRODRAFT_124544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
DUF4140
BRO1
DHO_dh
HIP1_clath_bdg
Sec16
SAM_PNT
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
20195867
NCBI-ProteinID:
XP_009024713
JGI:
Helro1_124544
UniProt:
T1EH17
LinkDB
All DBs
Position
Unknown
AA seq
220 aa
AA seq
DB search
KGEIDRCLKKVTEGVDIFEDLWQKIYSTTNVNIKEKHEADLKKEIKKLQRLRDGIKTWLT
TPEVKEKKNLLEYKKLIETQMERFKVVERETKTKAFSKEGLGLQVKVDPKEKEKEDVVNW
LSQCIDSLNVRVDQCECKIESISAKKKKNDKDKQDQIDTLKSGLEKHKQHIGRLELIMRL
LDNDALAVDQILKIKEEVDYYISSNGEPLFNENEFIYEEL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
aaaggtgaaatagatagatgtttgaagaaagtgacagaaggtgtggatatttttgaagat
ttgtggcaaaagatatatagcaccacaaatgttaacattaaagagaagcatgaggcagat
ttgaagaaagagataaagaagctacagcgattgagagatggtataaaaacatggctgaca
actccggaagtgaaagagaaaaaaaatttgttggagtacaagaaacttattgaaactcaa
atggaaagattcaaagtggttgagagagagacaaagacgaaagctttctccaaagagggg
ctagggttgcaggtcaaagtagatccgaaagagaaggagaaggaggacgttgttaattgg
ttgtcgcagtgcatagactctctcaatgttcgtgtggaccagtgcgagtgtaagattgaa
agtatttcagccaaaaagaagaaaaacgataaagataaacaggaccaaatagataccttg
aagtctggtctggagaaacacaagcaacacataggcagactggagttgatcatgcgatta
ctcgataacgacgctctggccgtcgaccaaattctaaaaatcaaagaggaagtcgactat
tacatatcgtcgaatggtgagccccttttcaatgaaaacgaattcatttacgaggaactc
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