Helobdella robusta: HELRODRAFT_128998
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Entry
HELRODRAFT_128998 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hro04040
]
HELRODRAFT_128998
Ion channels [BR:
hro04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
HELRODRAFT_128998
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
DUF3371
FAM176
Motif
Other DBs
NCBI-GeneID:
20196113
NCBI-ProteinID:
XP_009026787
JGI:
Helro1_128998
UniProt:
T1EHR3
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
VEYVFLIVFTIEAFMKIIAYGFVLHPGAYLHNGWNILDFIIVVVGLFSVVLPTFNINAFD
VKALRAFRVLRPLKLVSGVPSLQVVLNSILKAMVPLFHIALLVIFVIIIYAIVGLELFSG
KLRSTCYVNNTKTFALDPPHPCGKGYECKAEKNQVCLKGWIGPNFGITNFDNIGLAMLTV
FQCVTMEGWTSVMYDINDSVGGSWPWIYFVSLIIIGSFFVLNLVLGVLSGEFSKEREKAK
ARGDFKKLREKQQLDEDLKGYLEWITQAGDDDDDDDDDDDDGNNDCNDDDTIDKNVDDNE
GMHQQQAQQLSWWANKRFRLEKLNRRCRKCCRQVVKSQSFYWLVIIFVFLNTCVLTSEHY
GQPDWLDTFQEFANLFFVILFALEMILKMYSVGLQGYFVSLFNRFDCFVVVCSIVEAVFT
YTQVMPQLGVSVLRCARLLRVFKATRYWSSLRNLVASLLNSMRSIVSLLLLLFLFIIIFA
LLGMQLFGGRFNFNANLRKPRSNFDSFFQSLLTVFQILTGEDWNAVMYNGIEAYAEVKPF
GVLVCFYFVVLFICGNYILLNVFLAIAVDNLADANTLGEAEKRENEERERIEMENVQAVR
GQSNDIVIVGEDRDDDDDDDDDGDDEAAGQQLQQLQLQQNYNNSNSNINSNGNNTNNNNG
VDDDVMQQQQQQQHQQQQQHLQQQHLQQQHLQQQQQQQQQQHVDDQQQQIDDQQQDDQQQ
QQHQYARPRRLSEIIIPDEIKPIPPSSSLFIFSPTNKFRVFCHHICTHQYWSNFILICIL
ISSAVLAAEDPLRAHSYRNKILRYFDYFFSTVFTIEITIKIIANGFILHKNSFCRSLFNL
LDLLVVVVALISFAVVNDRISAVKILRVCRVLRPLRAINRAKGLKHVVQCVVVAVRTIYN
ILLVTFLLEFMFAVIGVQLFKGAFHECNDHSMMTKAECKGHFIVYKQGDLSKPHLEERIW
SNNNFNFDDVSQGMLTLFTVATFEGWPDLMYRSIDSTVENRGPIYNYRQGIAVFFFIYII
IIAFFMVNIFVGFVIVTFQNEGEQEYKNCELDKNQRKCIEFALKAKPQRRYIPRVPFQNK
IWWFVTSRGFEYGIFVLIMLNTLTLAMKYADQSDLYEDVLDYFNMLFTGVFTVEFILKLI
AFKIKNYFGDAWNVFDFVIVLGSIIDIVYTEVNPHKSSPLMSISFFRLFRVMRLIKLLSR
GEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIVLNEETSIHRNNNFQTF
PQAVMVLFRSATGEAWQEIMMSCINSETVLCDPLSDEKGRCGSIIAFPYFISFYILCSFL
IINLFVAVIMDNFDYLTRDWSILGPHHLDEFVRQWSEYDPEANGRIKHLDVVTLLRKISP
PLGFGKLCPHRVACKRLVTMNMPLNSDGTVMFNATLFALVRTSLRIKTEGNIDQANEELR
AVIKKIWKRTSNKLLDQVVPPAGSDDDITVGKFYATFLIQDYFRRFKKRKEQMLKMNQLG
HHHTEALQAGLRAVHDLGPELRRAISGNLEGDDDNDDVLMRRKEEEPSHRRDHSLFGTVL
SAL
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
gtagaatacgtcttcctcatagtcttcactatcgaagccttcatgaagatcattgcctat
gggttcgtcctacaccctggcgcttacctccacaatggctggaacattttagacttcatc
atcgtcgttgtcggtttattcagcgtagtactacccacattcaacataaatgcattcgat
gtgaaggctttgagggccttccgggttctaagacccctgaaacttgtctccggggtccca
agtttgcaggtggtgcttaactcgattctgaaggccatggttcctctcttccacatcgcc
ctgctggtcatcttcgtcataatcatctacgccattgtcggcctcgagttgttctctggc
aagttaagaagcacatgctacgttaataacacgaaaacctttgcccttgacccgccccac
ccctgtggaaaaggttacgagtgcaaggccgaaaagaatcaggtctgtctaaaaggctgg
attggtcctaacttcggaataacgaacttcgacaacataggtctcgcgatgttaactgtc
ttccaatgcgttacaatggaaggctggacgtctgttatgtatgatataaacgactcagta
ggcggaagttggccgtggatttatttcgtcagcctcatcatcattggctccttcttcgtc
cttaaccttgtacttggtgtccttagcggagaattttccaaagagagggagaaggcaaag
gcgcggggggactttaagaaacttcgggagaagcagcagctggatgaggacctgaagggc
tacttggagtggatcacccaagcaggtgatgatgatgatgatgatgatgatgatgatgat
gatggtaataacgattgtaatgatgatgacaccatagataaaaatgtggacgataatgaa
ggaatgcaccaacagcaagcacaacaactgtcttggtgggccaataaaaggtttcgcctg
gagaagctaaacagacgttgccggaagtgttgtcgccaggtcgtcaagtcccagtcattc
tattggctggtcataatttttgtcttccttaacacgtgtgttttgacgtcagaacactac
ggacagcctgattggttggacacttttcaagaattcgccaacctcttcttcgtcatccta
ttcgccctggagatgatattgaagatgtacagcgttggtttgcagggctatttcgtctcg
ctcttcaataggttcgattgctttgtggtggtctgcagcattgttgaggctgtctttacg
tacacacaagttatgcctcaactcggagttagcgttctcaggtgcgctcgtctgctcagg
gtattcaaggctacgaggtactggtcttcactacgtaacctagtggccagtctgctgaac
agcatgcggtcgatcgtcagcctcctcttacttctcttcctcttcatcatcatcttcgcc
ctgctgggtatgcaactcttcggtggcaggttcaattttaacgccaacctcagaaaacct
cgaagtaatttcgactctttctttcagtcgctactcacagtttttcagatactgacgggg
gaagactggaatgctgtcatgtacaatgggatcgaggcctatgcagaggtcaagccgttc
ggggttctcgtctgcttctacttcgtcgtgctcttcatctgtgggaactatatactactg
aacgtgttcttagccatagcggtggacaatctggcagatgccaacacgctgggggaggct
gagaagagagagaatgaggagagagagagaatcgaaatggagaacgttcaggcagtgaga
ggtcagtcgaacgacatagtaatagtcggtgaagatcgtgatgatgacgacgacgacgat
gatgatggtgacgatgaggcagccggccagcaactacaacaactgcaactacaacaaaat
tacaacaacagtaacagtaacatcaattcaaatggcaacaacactaacaacaacaatggc
gtagacgatgacgtaatgcagcaacaacaacaacaacaacatcaacaacaacaacaacat
ctacaacaacaacatctacaacaacaacatctacaacaacaacaacaacaacaacaacaa
caacatgtggatgaccagcaacaacaaatagatgaccaacaacaagatgaccaacaacaa
cagcaacatcagtatgcccggcccagacgactgtctgaaatcatcattccagatgagata
aaacccataccaccgtcgtcatctctctttatattctcgcctacaaacaagtttcgagtt
ttttgtcatcacatatgtacacatcagtactggagtaacttcattttgatttgcatattg
ataagtagtgctgtattggcagctgaagatcctttgagggcccattcttataggaataaa
attctccgatattttgattatttcttctcgaccgttttcacaattgaaatcaccatcaaa
atcatagccaacggcttcatcttacacaagaacagcttctgtcgcagcctcttcaacctc
ctcgacctacttgtggttgtcgtcgctcttatctcttttgccgtcgtcaacgacagaata
agcgccgtaaagatattgcgcgtctgtcgggttttgagacctctgagggcaatcaatagg
gcaaaagggttaaagcatgtggtacagtgtgtagttgtggctgttaggacgatctacaac
attctcctagttacatttttactcgagttcatgtttgcagtcatcggcgttcagctgttc
aaaggtgcttttcacgagtgcaatgaccactcgatgatgacgaaagctgaatgcaaaggt
cacttcatagtgtacaagcagggtgacctttccaagccccatctggaggaacgcatctgg
tcgaacaacaacttcaactttgatgacgtcagccagggtatgcttaccctattcaccgtg
gccacattcgaaggctggcccgacttaatgtatcggagtatcgattcaactgttgagaac
agaggcccaatatataattacagacagggtatcgccgtattctttttcatctacatcatc
atcatcgcatttttcatggtgaacatctttgtcgggttcgtcatcgtcacgtttcagaat
gagggtgaacaggagtataagaactgcgaacttgataaaaaccagcgcaaatgtatcgag
ttcgccctgaaagccaaaccccagcgtaggtacattccgagggtaccatttcaaaataaa
atatggtggtttgtgacgtcacggggttttgaatacggcatctttgtccttatcatgttg
aatactttgacgcttgctatgaagtatgccgaccaatcggatttgtacgaagacgtcctt
gactacttcaacatgctctttaccggagtcttcactgttgagttcatactgaagttgatc
gccttcaaaatcaagaattattttggggacgcttggaacgtctttgacttcgtcattgtt
ctcggatcaatcattgatattgtttacactgaagttaacccccacaaatcttcaccactg
atgagtataagtttctttcgtctcttccgagttatgcgtctgatcaagctactaagtcgt
ggggagggcataagaactctattgtggacattcatcaaatcatttcaggccttgccctat
gttgctctgctgatcgtcatgctcttcttcatatatgcagtcatcggaatgcaggttttc
ggcaaaatagtcctaaacgaagagacatccatccataggaacaacaactttcagacattc
ccgcaggccgtcatggttctcttcaggtctgcgactggcgaagcctggcaagaaatcatg
atgtcttgtataaactctgagacggtcctctgcgatcctctgtcagacgaaaagggacgc
tgtggttcaatcattgcctttccttactttatatcattctatattctctgctcgttcttg
atcatcaatctatttgtggctgttataatggacaattttgattatttgactagagattgg
tcgattcttggaccgcaccacctcgatgagtttgtcaggcagtggtctgaatatgaccca
gaagccaacgggcgcataaaacatctagacgtggttactctactgagaaaaatatccccg
cctctgggcttcggcaagctttgtccccacagagtggcttgtaagagattagttaccatg
aacatgcccttgaactctgatggcacggtcatgttcaacgcaaccctctttgctcttgtc
aggacatctctgcgaattaagaccgagggcaatattgaccaagcgaatgaggagttgagg
gcggtgatcaagaagatttggaaacgaacgagtaacaagctactagaccaagtggtcccg
ccagccggaagtgatgacgacataacggtcgggaagttctatgcaacatttttgatacaa
gattacttcagaaggtttaagaaacgcaaggagcagatgctgaaaatgaaccaactaggg
caccaccataccgaagctctgcaagctggtctgagagctgtgcatgatctgggcccggag
ctaaggcgagccatttccggtaatttggagggtgatgatgataatgatgacgttctgatg
agaagaaaggaagaagaaccttctcatagaagggaccatagtttatttggcactgtcctc
tcagcacta
DBGET
integrated database retrieval system
