Helobdella robusta: HELRODRAFT_154673
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Entry
HELRODRAFT_154673 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hro03016
]
HELRODRAFT_154673
Enzymes [BR:
hro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HELRODRAFT_154673
Transfer RNA biogenesis [BR:
hro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HELRODRAFT_154673
Prokaryotic type
HELRODRAFT_154673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
20197405
NCBI-ProteinID:
XP_009016325
JGI:
Helro1_154673
UniProt:
T1ELF5
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MENALDNPNTVPKSKKSMKKQKTTWKHKQDYDGNDETQGKKPKVDGEQDWPFRKKKVALL
LVYSGKGYLGMQRNPGFRTIESELFDALLKAGVVRPDHIEEPRSKMSFQRAARTDKGVSA
AGQVVSFKMFVDVEDAVGKINSHLPAQIHVLGIKRTTKTFDCKNSCTARTYTYLTPSFAF
APMNETVCESYRITKDVLTHLQDILNCFCGTHNFHNFTSGKKSGDASAQRYIMEFKVGDP
FIRDDIEYVKLTVKGQSFMLHQIRKMTGIAMAICRSFVNMDILKKSWGADKVDIPKAPGL
GLVLDQLHYNAYNKKFGTDGMHEAIEWSQYKEEIEEFKENFIYSTIFQTEKEEKSMMKWL
GTLHLHHFDYITGHLYNTLPLVEAKNNLKEPCNNGPQTVEPDEKKQKTNANLNLGDESSA
ILEKTERSIDTSLSTDKGS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgcactggacaatccaaacactgttcctaaatctaaaaaaagtatgaaaaag
cagaaaacaacttggaagcacaaacaggactatgatggtaacgatgagacacaaggcaag
aaacctaaagttgatggggaacaagactggcccttcagaaagaagaaggttgctctgctg
cttgtttattctggcaagggttaccttggcatgcagaggaacccaggattcagaacaatt
gaatcggaactttttgatgctctgttaaaggcaggagttgtgcgccccgaccacattgaa
gagccacgttcaaagatgtccttccaaagggcagcccgcactgacaagggagtgtctgca
gccggacaagtagtctcattcaagatgtttgttgacgtagaggacgccgtggggaagatc
aacagccacctgcctgcacaaattcacgtcctgggtataaaaaggacgacgaagacgttc
gattgcaaaaactcgtgcactgctcgtacgtacacctatctgactccttccttcgcattt
gctcctatgaatgagactgtttgtgagagttacagaataacaaaggatgtgctcactcat
ctgcaagacatattgaactgtttctgcggaactcacaacttccataacttcacatcagga
aaaaaatctggagatgcaagtgcacagcgatacattatggagttcaaagtgggcgatcca
ttcattcgcgacgacatcgagtatgttaaattgacagtgaaggggcagagcttcatgctg
catcaaatacgcaagatgacaggtattgcaatggccatttgcagatcttttgtaaatatg
gacattttaaagaaaagttggggggctgacaaagttgacattcctaaagcgccaggcttg
ggtcttgtgttggatcaactgcattacaatgcttacaacaagaagtttgggacagatgga
atgcacgaagcaattgaatggagccagtacaaagaagaaattgaggaattcaaagagaat
tttatatattccacaatttttcaaacagaaaaagaagaaaaatctatgatgaaatggttg
ggcaccctgcatctccaccattttgattacataacaggacacttgtacaacactctacca
cttgtagaagccaagaataacttgaaggaaccgtgcaataacggtccacaaaccgttgaa
cccgatgaaaaaaaacaaaagacaaatgccaatctaaatttaggtgatgaatcctctgcc
attcttgaaaaaacagaacggtcgattgatacatctttaagcactgataaaggatcttga
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