Helobdella robusta: HELRODRAFT_157945
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Entry
HELRODRAFT_157945 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
hro
Helobdella robusta
Pathway
hro03430
Mismatch repair
hro03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HELRODRAFT_157945
03460 Fanconi anemia pathway
HELRODRAFT_157945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_157945
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
HELRODRAFT_157945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
HATPase_c
Beta_helix
Motif
Other DBs
NCBI-GeneID:
20197779
NCBI-ProteinID:
XP_009029561
JGI:
Helro1_157945
UniProt:
T1EMH9
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MIKPIDKTSIHRLCSGQVVLTLATAVKELVENSLDAGAKNISVRCTKSGLEKIEVSDDGC
GVEENNFEALTLKHHTSKISDFKDLVDVDTFGFRGEALSSLCALSKLSITTRHVSKCIGT
RLLFNNNGDIVSRSPCARQPGTTVLVVDLFHTLPVRRKELEKNINKEFSKMLSFLSGYCL
IQKGLKLTITNQAKDNGSSGVMLRVSGNSTIKDNIIDVFGVKQVPRVIVFNMGFIISSLD
DDLFIIDQHASDEKFNFERLQRTVTLQSQKLIQPLALELTACNECTLLDNIHIFRKNGFE
FVINRDACPSERVQLTSLPTSKNWAFGPQDGVMCRPSRIRQMLASRACRSSVMIGTALNH
SEMRKLVDHMGEIDQPWNCPHGRPTIRHLIDMNMLKN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcctattgacaagacatcgatacacagattgtgctcgggacaagttgtcctc
acactggcaactgccgtcaaggaacttgtggagaacagtctggatgccggggccaaaaat
atctccgtgagatgcaccaagtcaggcctggagaagatcgaagtcagcgatgatggctgc
ggagtggaggagaataattttgaagctctcacactgaagcaccacacatcgaagatcagc
gacttcaaggacctcgtggacgtcgacacgtttggctttaggggggaagccctcagctcg
ctgtgtgccctcagcaagctgtcaatcacaactcgccacgtctccaaatgcataggaacc
aggttgttatttaataacaacggtgatattgtatccaggtctccatgcgctaggcagcca
ggaactacagtgttggtggtggacctcttccacacactgcccgttaggaggaaagaactg
gagaagaacatcaacaaggagttcagtaagatgttgtcgttcctgtctggttactgcctc
atacagaaaggactcaagttgacgataaccaatcaggcaaaagataatggttctagtggg
gtgatgttacgagtgagtggcaactcgaccataaaggataacatcatcgatgtctttggt
gtcaaacaggttcctcgtgtgattgtcttcaacatgggtttcatcatcagcagcttggac
gacgacctcttcattatcgaccaacacgcctccgacgagaagttcaacttcgagcgactc
cagcggactgtcaccctccaaagtcagaaactcatccaaccactggcactggagttgacg
gcctgcaacgaatgcaccctgctcgacaacattcacatctttcggaagaatggtttcgag
ttcgtcatcaaccgggatgcctgtccatctgaacgcgttcaactgaccagcttgccgact
agtaagaactgggcgtttggtccacaagatggtgtcatgtgcagaccttctcgcatccgg
cagatgttggcgtcgagagcctgccgaagctctgttatgattggcaccgctctcaaccat
tcagaaatgagaaagctggttgaccacatgggagagatagatcagccctggaactgtcca
cacgggcgaccgacaatcaggcatttgattgacatgaacatgttgaagaactga
DBGET
integrated database retrieval system