Helobdella robusta: HELRODRAFT_158187 Help Entry HELRODRAFT_158187 CDS       T03272                                  Name (RefSeq) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism hro  Helobdella robusta Pathway hro03020   RNA polymerase hro03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:hro00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     HELRODRAFT_158187   09124 Replication and repair    03420 Nucleotide excision repair     HELRODRAFT_158187  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hro03021]     HELRODRAFT_158187    03400 DNA repair and recombination proteins [BR:hro03400]     HELRODRAFT_158187 Enzymes [BR:hro01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      HELRODRAFT_158187 Transcription machinery [BR:hro03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      HELRODRAFT_158187 DNA repair and recombination proteins [BR:hro03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       HELRODRAFT_158187 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 TAF1D Motif Other DBs NCBI-GeneID:  20197801 NCBI-ProteinID:  XP_009011378 JGI:  Helro1_158187 UniProt:  T1EMK1 LinkDB All DBs Position Unknown AA seq 766 aa AA seqDB search MANNTVYVFSQKDSKYAYKTELRSCLEHSSRPTSTMWVNLLAEGSGVRNVGIEQSIVALL PYIKQEIPIIIDFDDLEMMEMVEEASCVQDQQVALNFIGGRGTRPGVTREKRIKYAKEII QKEMLPHVGDSDSCKTRKAYFLGLLHGASLGRRAVDDRDHYGNKRLDLVGPLLAYLFRET TRQGPVLNRLTYASTLSHLRRVNSPIGRDGKLARPRQLHNTQWGMICPVETPEGCAVGLI KNLALMANISVGSQPSPILEFLEEWSMEILEEISSFAIMGATKIFVNGCWVGIHRDPEPL MNTLKKLRRQMDVIISEVSMSWDFSYREIMIYTDAGRISRPLLIVENQKLLLKKRHIDLL KERKHKNYGWQDLLANGVVEYIDTMEEETAMVAMEKGILYCTTYTHCEIHPSMILGVCAS IIPFPDHNQSPRNTYQSAMAKQAMGVYTTNYHVRMDTLAHVLYYPQKPLVTTRSMEYLRF NELPAGINSITAIASYSGYNQEDSIIMNESAVDRGFFRSIFYRSYKDAESKRGFGQEEVF EKPDRSYVKGMKNASYDKLDDDGIISPGTRVSGDDARIGKTITLPENEDEVSRRYTKRDN SVFMRKGDTEVVDQVMLSINQEGFKSCKIRVRTTRTPQVGDKFASRHGQKGTCGMKYKQE DMPFTAQGITQDIIINPHAIPSRMTIGYLIECLQGKVAANRGEIADATPFNDAVNVKKMS DILKRYGYHRYGNEVVYNGHTSRKMVSQIFIGPTYYQRLKQATHGG NT seq 2301 nt NT seq  +upstreamnt  +downstreamnt atggccaacaacacagtgtacgtttttagtcagaaagattctaaatacgcctacaaaacc gagttgagatcgtgtctggaacattcctcgagaccgaccagcaccatgtgggtcaatttg ttggcagaaggaagtggtgtcagaaacgtgggtattgaacagagtatcgtagctctcctt ccatacatcaaacaggaaattcctatcatcattgattttgatgatcttgagatgatggag atggtggaagaagcatcctgtgttcaggatcagcaggtggccttgaactttattggaggg agggggacgagacctggggtgaccagggaaaagaggatcaagtacgctaaggagattatc cagaaagagatgttgccgcatgtcggtgacagtgattcctgcaaaaccaggaaggcatat tttcttgggttattacatggtgcatcactaggcagaagagcagttgatgacagagatcac tatggaaacaagagattagatcttgtcggaccccttcttgcttatctcttcagagagaca accaggcaagggccggtgctgaatagactaacatacgcatccacgctctctcatctaaga agggtgaactctccaattggcagagacggaaagctggcgaggcctagacaacttcacaat actcaatggggcatgatctgtccggttgagaccccagaaggatgtgcagtcggcttgata aagaacctcgccctcatggctaacatatccgtcggctcgcaaccatcccccatactcgag tttctggaggagtggagcatggagattctggaagagatttcttcctttgctatcatgggt gctacaaaaatttttgtcaatggatgctgggtgggcattcacagggacccagaaccactg atgaacactctgaagaaacttcgtcgtcagatggatgtcatcatatccgaagtatcaatg agttgggatttcagctatagagagattatgatatacactgatgccggcaggatatccaga cctttgctcattgtagaaaatcaaaaacttctactcaagaaacgacatatcgatctgcta aaggagagaaaacacaaaaattatggttggcaagatttgttagcaaatggagtagtagag tacattgatacgatggaagaagaaacagccatggtggctatggagaaaggtattttgtac tgcacaacgtacacgcactgcgaaattcatccatcgatgatacttggagtttgcgcctcc atcataccattccctgatcacaaccagtcgccacgtaacacataccaatctgctatggcc aagcaagccatgggtgtctacactacaaactaccacgtcagaatggatacattagcccac gttctctattatcctcaaaagcctctcgttactacaaggtcgatggagtacttaagattc aacgagctaccggctggcatcaacagcatcacagccattgcatcgtactctggatacaat caggaagattcaatcatcatgaacgagtcagctgtcgatcgcgggttttttcgatcaatt ttttatagatcgtacaaggatgccgaatcaaagagggggttcggtcaggaggaggtgttt gagaaacctgatagatcttacgtgaaaggcatgaaaaatgcatcttacgataagttggat gatgatggcatcatatcaccgggtaccagagtatctggagatgatgctcgcattggtaag actatcacactgcctgaaaatgaagacgaggtatcgaggaggtacacgaaacgagacaac agtgtcttcatgagaaaaggtgatacagaagtggtggatcaggtaatgctttcgatcaac caggagggtttcaagtcctgcaagatccgtgtcaggactaccagaacgccgcaggttggc gacaagtttgccagtcgtcacggtcagaaaggaacttgtggcatgaaatacaaacaagaa gatatgccatttacagcacagggcatcacccaggacatcatcatcaacccgcacgccatt ccttctcgtatgacgattggttatttgattgagtgcctgcagggtaaggtggcggctaat aggggtgagattgcagacgccaccccattcaatgatgccgtcaatgtcaagaaaatgtcc gatattctcaagaggtatgggtatcataggtacggaaatgaggttgtctacaacggtcac accagtcgcaagatggtttctcagatattcatcggaccaacgtactaccagaggttgaag caggcaacccatggagggtag

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