Helobdella robusta: HELRODRAFT_160596
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Entry
HELRODRAFT_160596 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
hro
Helobdella robusta
Pathway
hro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HELRODRAFT_160596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_160596
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
HELRODRAFT_160596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Mfa2
Motif
Other DBs
NCBI-GeneID:
20198817
NCBI-ProteinID:
XP_009015795
JGI:
Helro1_160596
UniProt:
T1EQG7
LinkDB
All DBs
Position
Unknown
AA seq
216 aa
AA seq
DB search
MADDFKTVFPRKYYKKFFDENVRPDNRSLDECRPLHLEVGGLGTADGSSLVTIGNTKIIC
GVVSMQWTITCELVCLDYDGCLYDACCLALMAALANTNLKMYAKIEDGSEDLEEQISYQP
TKESKKLSLTNKFFATTFALWNSKLILFDPTKEEEDLSRGTITIVCSANSDEYFIQKPGG
CELTDEQLNFCLKHSKKRTELLLDMFNEKLHSTDEQ
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgattttaaaacggtttttccaagaaaatattataagaagtttttcgatgaa
aatgtgcgaccggataacagatcactggacgaatgtcgtcctcttcatttggaagttggt
ggattgggaacagcagatggttcatctttagttacgattggcaacacaaaaattatttgt
ggtgttgtttcgatgcaatggacgataacctgcgaactcgtctgccttgattatgatggc
tgcctgtacgatgcctgctgtctggctctcatggctgctcttgccaatactaatctaaaa
atgtatgctaaaatcgaggatggcagtgaagatttagaggaacaaatcagctaccaacca
acgaaagagagcaaaaaactttccctaaccaacaaattctttgccacaacattcgctctc
tggaacagcaagttgatattatttgatccgacaaaagaggaagaagacttatctagaggc
acaatcaccatcgtctgctctgccaattcagatgaatatttcattcagaagccaggcgga
tgtgagctgacagatgaacaattaaatttctgcttgaaacattcaaagaaaaggaccgaa
cttttattagacatgtttaatgaaaagcttcactccactgatgaacaataa
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