Helobdella robusta: HELRODRAFT_161346
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Entry
HELRODRAFT_161346 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
hro
Helobdella robusta
Pathway
hro03410
Base excision repair
hro03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HELRODRAFT_161346
03450 Non-homologous end-joining
HELRODRAFT_161346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_161346
Enzymes [BR:
hro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HELRODRAFT_161346
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
HELRODRAFT_161346
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
HELRODRAFT_161346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
NTP_transf_2
HHH_3
HHH
Motif
Other DBs
NCBI-GeneID:
20199132
NCBI-ProteinID:
XP_009019518
JGI:
Helro1_161346
UniProt:
T1ERD2
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MSENKENYVLYQEQMMKTYEQINEKWKALSYKKAIISLKKHPAKISTFEEAKSLSGVGEK
LAEKIWEIVESGKLRKLDELSETEEVTSLNTFVNVWGAGPKTAQTWFAQGFRSLKDLEEK
AQLTRCQKIGLKYYDELIERMERAEVQKIESVVLTEVNILRPGCELVVCGSYRRGQTTCG
DVDILITHPDGSSHVGLFDALIGSLTETGFLTDELIIAHNGPQQKYLGLCKLPESKHRRI
DIIVTPHNEFYTALVYFTGSGHFNRSMRHMASKMNMSLNEHGLYTGVTRNNGVKVCSGSS
LPITSEESIFKYLGVPFRPPEERDY
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaataaagagaattatgtactataccaagagcaaatgatgaagacatatgaa
caaataaatgaaaaatggaaagctttaagttacaaaaaagctataatttcattgaagaag
cacccagcaaagatcagtacatttgaggaagctaaaagtttaagtggtgtaggagaaaaa
ctagcagaaaaaatatgggagatagttgaaagtggcaagctgaggaaattagatgaactg
tctgaaacagaagaggtgacgtcactcaacacgtttgtcaatgtttggggcgccggaccg
aagactgcacaaacttggtttgctcaaggtttcagaagtctaaaagatcttgaagagaag
gctcagttgacaagatgtcaaaaaattggattgaaatattatgatgagctgattgaaagg
atggagagagccgaagtccaaaaaattgaatctgtggtactgacagaagtcaacatattg
agaccaggttgtgagttggttgtgtgtggatcatacaggcgtggtcaaacaacttgtgga
gatgtggatattttaatcacacatcctgacggctcttctcacgtcggcttgtttgatgct
ctcatcggatcgctcactgagacagggtttctgacggatgaattgatcattgctcataac
ggacctcaacaaaaatatttggggctgtgcaaattgccagaatcaaaacaccgtcgtatt
gatataattgtgactcctcacaacgaattttacactgctcttgtttacttcactggatca
ggtcatttcaacagatcaatgaggcatatggcctcaaagatgaatatgtctctcaatgaa
catggtctctacactggagtcacaagaaacaatggtgtaaaagtgtgctcaggcagtagt
cttccgataacttccgaagaatccatcttcaaataccttggagtacctttcagacctccc
gaagaacgagattactga
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