Helobdella robusta: HELRODRAFT_165611
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Entry
HELRODRAFT_165611 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K05636
laminin, beta 1
Organism
hro
Helobdella robusta
Pathway
hro04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
HELRODRAFT_165611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
20201128
NCBI-ProteinID:
XP_009030395
JGI:
Helro1_165611
UniProt:
T1EX28
LinkDB
All DBs
Position
Unknown
AA seq
1891 aa
AA seq
DB search
MATDYNNTQQQQQQQHPNNYTINITTKTTHWLEEEQRKWIPQTKTVTANHWVPTHHRLTS
LHSPHHFITISLLLFFISPHLSIVVEAFENVCQAQTGPGPNDFTYSVCQGDPLKILRSNA
SYSNTSPRRCFTCTANQFPISYMTDVIPNTDGQPNYNTSWQSLTWLTFGRRPQASILISA
GRRFVLQDDLKFTFASQRPKQAILEKSVDYGVTWQTLQIYNISCASVYNAAIKQSIVAPD
DVMCSEEYSSEWPSTGGEVKFEVNRDRLQMYLGSMFNNFEALYNAYQDTNLLEFLTFTDL
KLNLIYPGTDGGEFSGRQNDLLGYSYAISNIYLVAGCDCNRHAKFCVPQNGRMVCVCEHN
TAGENCEKCLPLYNNRLWALGSFKPPLNGTANECQKCECHGRAVECLYDPGKGRGVCINC
ANNTMGDNCAECMNGYFINSSISIDDPGVCNKCDCEPHGMESSTEMNCSYGTGQCQCKKG
VTGLRCDSCYSGTYGLLSNDATIGTCKQCSCNVQWTINGRNDCDQLTGQCPCVTGVGTRD
CSICSDGYFKNATNNNKCDPCQCNYGGAVNQTCNKLTSDCTCRPNIISGSCRVAKPDFYV
PAPDYINLKPTPGSTSTCTNTTSVDKPIDEPFTERWYFSCFFGQKVNFVDVLSRVRRQGN
IIQSYVPSVRYAIRDVYSIPGATLTITNTGPNINFDPTLYPPSNGSASDCIQGSTQVFTI
FNLPPGFGQAWWNDTAKALLNARCKYDAEFKVTDAVNFSSPLLFDSLVLVPDPDASLVYT
SNVEKQEIYDQCIFGLIQMYSNVRNRCLEYYFTLMAEQTAEAYACNCDSVGTVPGSVCSY
VSGQCQCKLNVGGRRCEYCLRGTFAFSDTGCQNCSCDMNGSFHSVCDYTSGQCPCRPNVA
TYGQITTMGAPSERYCRFCLANFFGLPSGQGCQPCNCHSNGSASQQCDVITGACPCKDTF
GGQKCDQCRNGFYGFNATAGCTCDLSGNCYCKPNVGGAKCNQCKPGMYNLDATNADGCQP
CYCSSSASSPPPVCTSAVGFKMTTIQNDTGWEVQNPFFLFHLSSPPPYLGYRVSSYNQFI
QFTMLSNTTFNSGKVQLVILVAGDGRRISYQPDNVAFLQNQPNLLRVQLNEKFWVDSART
LSSLSQLLIQTYFLERYQVTLSQVIMTSSAPIDWPYIAINYVEQCTCSNNMEGLSCERCK
KGFKRAVVNDTTSACIDCQCEGMTADTQVCDEMVGRCLNCPAGRVGDRCDKCAPNVDESL
VGAEKCSKCKKGYWGISSAGCVPCQCNAVGSQDTTTCNMTSGQCTCQPNVAGVSCDRCSD
GYTNFTVAGCSMSSDQTSQINGISNATLFAFANRLVKAEADSKYLKTIVADLNTSLPSYS
DYIEELDVIYQIFDASLDTVLRVLSDAIAKLLDSIKTNQAHARTFANEASLKLLQLSKSF
PAYLLKTSQLSNLSDSLNQMNQQFSGVSSPISNSFAVLNNSVITLESNSNILNSNVINLS
TNLTQQIMTKNTSLVNDLNNTIEKEIASLNVSSASLKLGTAGIKLTAFNQLTFNSTVIYN
MIRNVNFTGDDVINVLALDDRFTALQNNALDLDTRVKTASNQTAPLENEIQNYTQLTTDL
LTRANVYLSQAATVNGRVTTASAKADQALNQSITVTNNAANMADVMKNFNDKANALIAQS
SGIIQTANNNINMITSASTTALAIITAVDPLLQQCTAAYGIANSTYDRCMSFNATLTPVM
TKSRNLTDSVNQNLNDVSFKMYQASRNALNSYSNDIDGYSTKASDLDNAAAKVRSLANAV
GNNITDTTKVLSNLNTRLDGINPPAIDMVTALLNDCRATKVTFDSYSLPAAVQKLQNDFL
LNKQWLDDLTKKRDDLLLQKNRMKVVMSQLS
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagattacaacaacacacaacaacaacaacagcaacaacatcccaacaactac
accatcaatattacaacaaaaacaacacactggctagaggaagaacaacggaaatggata
ccacaaacaaaaaccgttaccgcaaatcactgggtgccaactcatcatcgactgacgtca
cttcactcacctcatcacttcatcacaatctctctcctcctcttcttcatttctccacat
ctctcaatcgtagtggaggcctttgaaaatgtctgtcaggcgcagacaggccccggcccc
aatgacttcacttactccgtctgccagggtgacccgctgaagattttgaggagcaacgct
tcctacagcaacacctccccgagaagatgcttcacgtgcacggccaaccagtttcccatc
tcctacatgactgacgtcatccctaacactgacggccagccgaactacaacacgagttgg
cagtccctcacctggctaacgttcggtcggcgaccccaggccagtattttaatatcggcc
gggaggagatttgtcttgcaggacgatctgaagttcacttttgcgtctcagaggccgaag
caggctatcttagaaaagtcggttgactacggcgtgacgtggcaaactctgcagatctac
aacatcagctgcgccagtgtttacaacgcagccatcaagcagagcatagtggctcctgat
gacgtcatgtgcagtgaggagtacagttcggagtggccgagtactggaggggaggtcaaa
tttgaggtgaacagggacagactgcagatgtacttaggaagcatgttcaacaacttcgaa
gctctctacaatgcctaccaagatacaaatctcctagaattcctcaccttcaccgacctc
aaactgaatctcatctaccctggcactgacggtggagagttcagtggcagacagaatgat
ctattgggatattcatatgctatctctaatatttatttagtggctggatgcgactgcaac
cgccacgcgaagttctgcgtgccacagaacggcagaatggtatgcgtgtgtgaacacaac
acggcgggtgagaattgtgaaaaatgtctgcccctctataacaacagactttgggccctt
ggatcattcaaaccacccttgaatgggactgccaacgaatgtcagaaatgcgagtgtcat
ggcagggcagttgaatgtttgtacgaccctgggaagggcagaggggtatgcatcaactgc
gccaacaacaccatgggcgataattgcgccgaatgtatgaatggctatttcatcaactcc
tccatctccattgatgaccctggcgtttgtaataagtgcgactgcgagccacacggcatg
gagtccagcacggaaatgaattgtagctacgggaccggtcagtgccagtgcaagaaaggg
gtcacgggcctcaggtgcgattcttgttactcgggcacctacggactcctaagtaacgac
gccaccattggcacgtgtaaacagtgtagttgcaacgttcagtggacgataaacggtcga
aatgattgtgaccagctaaccggacagtgtccgtgtgtgacgggtgtggggacgagagac
tgctccatatgcagtgacggatatttcaagaatgccaccaacaataataaatgcgaccca
tgtcagtgcaactacggaggtgcagtcaaccagacgtgcaacaaactgaccagcgattgc
acgtgtcgaccgaacatcatcagcggttcttgtcgagttgctaaaccggatttctacgta
ccggccccggattacatcaatctgaaaccgactccaggatcgacgagtacttgcacgaat
accaccagcgttgataaaccgatagatgaaccgtttacggagagatggtactttagctgt
tttttcggtcagaaagtaaattttgttgacgtgctcagtagggttcgcaggcaaggaaat
attatccaatcctacgtaccaagcgtgcggtacgcaattagggatgtgtactcgatacca
ggtgccacgctgacgatcaccaataccggaccgaatattaatttcgatccaaccctctac
cctccctccaacggatccgcttccgattgcatccaaggaagtactcaagtcttcaccatc
ttcaatctacctcccggttttggacaagcatggtggaacgacacagccaaagccctttta
aacgctcgttgcaaatatgatgcagagttcaaggtcacagatgcggtcaacttcagcagc
ccactcctctttgattccttggtcctcgttccagatcctgacgccagcctcgtctacacg
tccaatgtggagaaacaggaaatatatgaccagtgcatctttggcctcattcaaatgtac
agcaacgtgcgtaataggtgcttggagtactactttactctcatggccgaacagactgct
gaagcttacgcgtgcaattgtgattcagtgggcaccgttccaggtagtgtgtgcagttac
gtcagtggtcagtgccagtgcaagctgaacgttggaggaaggaggtgtgagtactgcctg
cgaggtacctttgcattctctgacactggatgccaaaactgcagctgcgacatgaacggc
tccttccactccgtatgcgactacacgagcggccagtgtccatgtcgaccgaatgtcgcc
acgtacggtcaaatcacaaccatgggcgctccgtccgagcgttactgccgattctgcctc
gccaacttttttggcttaccttcgggtcagggttgtcagccctgcaactgccactccaac
ggaagtgcgtcacaacaatgtgacgtcatcacgggtgcctgcccttgcaaggacacgttc
ggagggcagaagtgcgatcagtgcagaaatggattctacgggttcaatgctactgctgga
tgcacttgtgatttgtcgggcaattgctactgcaagcccaacgtgggaggagccaagtgc
aaccagtgcaagccaggaatgtacaacctggatgcgacaaatgcagacggttgtcagcca
tgttactgctcctcatccgcatcttcaccgccacccgtctgcacgtctgcagttggattc
aagatgaccaccattcaaaatgatacaggctgggaagtacaaaaccccttcttcctcttc
cacctttccagccctcccccctacctcggctaccgagtctcctcctacaatcagttcatc
cagttcaccatgctctccaacactacgttcaattctgggaaagttcaactggtcatctta
gtggctggagatggcaggagaatttcctaccagccagacaacgtggccttccttcagaac
cagccaaaccttcttcgtgttcagttgaatgagaagttttgggttgatagcgccagaaca
ctttcttccttatcccagctcctcatccagacatatttcctggaaagatatcaggtgacg
ttgtctcaggtcataatgacgtcatctgctccaatcgactggccgtacattgctatcaat
tacgttgaacagtgcacgtgtagcaataacatggaaggattatcatgtgagaggtgcaag
aaaggattcaaacgtgcggtcgtgaacgacaccacaagcgcctgcatcgactgccagtgt
gaaggaatgactgcagacactcaagtgtgtgatgaaatggtgggcagatgtttgaattgt
ccagcgggcagagtgggcgacaggtgtgacaagtgcgcgccaaacgttgacgaatcattg
gtgggggcagaaaagtgtagcaagtgcaagaaggggtattggggcatttctagtgctggc
tgcgtgccctgccagtgcaatgctgtgggctcgcaggacacaacgacatgcaacatgacg
tcaggccagtgtacgtgtcagcccaatgtcgccggcgtcagttgcgatcgatgctctgat
gggtacaccaatttcactgttgccggttgctccatgtctagcgaccaaacttcccagatc
aacggaatttccaatgcaactttgttcgcttttgctaacaggctggtgaaggcagaagct
gattctaagtatttgaaaaccatagtggcggacttgaacacaagcctgccttcctactcc
gactacatagaagaactagatgtcatctaccaaatatttgatgccagtttggacactgtc
ctcagagtgctgagtgacgcaatcgcaaagttgctggactccataaaaaccaaccaggca
cacgcgcggacgttcgccaatgaagcttcactgaagctgctgcaactttcaaaatcattt
ccagcttacctgttgaaaacaagccaactgagcaatttgtctgactccttgaatcagatg
aatcagcagttctctggagtttcatcaccgatcagcaacagtttcgccgtcctcaacaac
agcgtcattacattggaatcgaactccaacattttaaactccaacgtcattaacttatcc
acgaatctgacgcagcaaataatgacgaagaacacgagcctcgtgaacgatctaaacaac
acaatagagaaagaaattgcatcgttgaacgtttcatcggccagcctgaaactggggaca
gcaggcatcaaactgaccgccttcaaccaactgacgttcaacagtaccgtcatctataat
atgattcgtaacgtgaacttcactggagatgacgtcataaatgtattagctctggacgac
aggttcaccgccctgcagaacaacgctctggatctcgacacgagagtcaaaacagcaagc
aaccagactgccccgttggaaaatgaaattcaaaactacacccaactgaccacagacctc
ctgacacgtgccaacgtctatctgtctcaagcagccaccgtcaatggcagagtgaccaca
gccagcgcgaaggcagaccaggctctcaaccaatccataacggtcaccaacaatgcagct
aacatggctgacgtcatgaagaacttcaacgacaaagccaacgctctgattgcacagtcg
tcaggcatcattcaaacagccaacaacaacatcaacatgatcacatcggcgagcacgact
gcactggcgatcataaccgcagtcgaccctctgctgcaacaatgcacagctgcctacggc
atcgctaattcaacatacgatcgctgcatgagtttcaatgcaacgctgactccagttatg
acaaaaagtcgcaacttaactgattcagtcaaccagaatctcaacgacgttagcttcaaa
atgtaccaggctagtcgaaacgctctcaattcatacagcaatgatatcgacggatacagc
acaaaagctagcgacttggataacgctgcggctaaagtgcgcagtttggcgaacgcagtg
ggaaacaacatcacagatactacgaaagttctcagtaacttgaatactcgactggatgga
atcaatcctcccgccattgatatggtgaccgcactactgaacgactgccgagccacgaaa
gtgacgttcgacagctacagcttgccagctgccgtgcagaaactgcagaacgatttcctg
ctaaacaagcagtggttggatgacttgacgaagaaacgcgatgatctgttacttcagaaa
aacagaatgaaggtggttatgtcgcaactatcttga
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integrated database retrieval system