Helobdella robusta: HELRODRAFT_166439
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Entry
HELRODRAFT_166439 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
hro
Helobdella robusta
Pathway
hro03018
RNA degradation
hro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HELRODRAFT_166439
09123 Folding, sorting and degradation
03018 RNA degradation
HELRODRAFT_166439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_166439
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_166439
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HELRODRAFT_166439
mRNA degradation factors
5'-3' decay
Lsm complex
HELRODRAFT_166439
Spliceosome [BR:
hro03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
HELRODRAFT_166439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
20201499
NCBI-ProteinID:
XP_009031609
JGI:
Helro1_166439
UniProt:
T1EY49
LinkDB
All DBs
Position
Unknown
AA seq
137 aa
AA seq
DB search
MLPISLLKTAVNHPMLVELKNGETYNGHLVCCDAWMNINLREVICTSRDGDRFWKMPECY
IRGSMIKYLRIPDEVIDMVKEEIHQKNRGRGEMRTTRGRGGPGRGVFSNRGGRGDGSKQN
RGGRGGGAGAGKPGAHK
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgatatcgcttctaaaaactgcggtcaaccatcccatgttagtggagttgaaa
aatggcgagacctacaacggccatcttgtttgctgtgatgcatggatgaatatcaatctc
agggaggtcatctgtacatctagggatggtgacagattttggaaaatgccggaatgttac
atcaggggcagcatgatcaagtacctccggatccctgacgaggtgatcgacatggtgaaa
gaggagatccatcagaaaaatagagggagaggggagatgaggacgaccagaggaaggggt
ggtccaggcaggggtgtcttcagtaatagaggaggaaggggggatggtagcaagcagaac
agggggggtcgtggtggaggggctggtgctggcaagcctggtgcccataaataa
DBGET
integrated database retrieval system