KEGG   Helobdella robusta: HELRODRAFT_166439
Entry
HELRODRAFT_166439 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
hro  Helobdella robusta
Pathway
hro03018  RNA degradation
hro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HELRODRAFT_166439
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HELRODRAFT_166439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hro03019]
    HELRODRAFT_166439
   03041 Spliceosome [BR:hro03041]
    HELRODRAFT_166439
Messenger RNA biogenesis [BR:hro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     HELRODRAFT_166439
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     HELRODRAFT_166439
Spliceosome [BR:hro03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    HELRODRAFT_166439
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 20201499
NCBI-ProteinID: XP_009031609
JGI: Helro1_166439
UniProt: T1EY49
LinkDB
Position
Unknown
AA seq 137 aa
MLPISLLKTAVNHPMLVELKNGETYNGHLVCCDAWMNINLREVICTSRDGDRFWKMPECY
IRGSMIKYLRIPDEVIDMVKEEIHQKNRGRGEMRTTRGRGGPGRGVFSNRGGRGDGSKQN
RGGRGGGAGAGKPGAHK
NT seq 414 nt   +upstreamnt  +downstreamnt
atgcttccgatatcgcttctaaaaactgcggtcaaccatcccatgttagtggagttgaaa
aatggcgagacctacaacggccatcttgtttgctgtgatgcatggatgaatatcaatctc
agggaggtcatctgtacatctagggatggtgacagattttggaaaatgccggaatgttac
atcaggggcagcatgatcaagtacctccggatccctgacgaggtgatcgacatggtgaaa
gaggagatccatcagaaaaatagagggagaggggagatgaggacgaccagaggaaggggt
ggtccaggcaggggtgtcttcagtaatagaggaggaaggggggatggtagcaagcagaac
agggggggtcgtggtggaggggctggtgctggcaagcctggtgcccataaataa

DBGET integrated database retrieval system