Helobdella robusta: HELRODRAFT_169542
Help
Entry
HELRODRAFT_169542 CDS
T03272
Name
(RefSeq) hypothetical protein
Organism
hro
Helobdella robusta
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Laminin_G_2
Laminin_G_1
GAIN
HRM
Cadherin_2
EGF_laminin
RET_CLD1
EGF
7tm_2
Laminin_G_3
GPS
Motif
Other DBs
NCBI-GeneID:
20202876
NCBI-ProteinID:
XP_009013584
JGI:
Helro1_169542
UniProt:
T1F226
LinkDB
All DBs
Position
Unknown
AA seq
2426 aa
AA seq
DB search
MTCFECCHLLEVAGTSAGCARDCYDAERKKRAVTNRPPLFNSTQYITNVPEELPPGVVLS
VGIFAVDPDDRDMGKITYSLFATKDQRSQSMFEINPADGKITTSQKLDRESMPVHYFKVV
ATDSGKPRRSSDVSLIIYVQDVNDHFPKFEQNLYTKIIFENVGVGSEVVTVHASDEDPDE
NGEIIYKIINNGDIENVFEIDPQLGILTTSAQLDREKKDFYELKVLAMDSSVQDIRLSST
VNVEITIQDENDNRPQFKNGSYQYKIKEDYDYIANPVIGIVDATDVDAGNNGLVRYSITS
GNSLNHFVIDPNDGTLSLVHPLDHEKVPSYRLSVKAQDSGQPAMSNNTVVHIDVLDVNDN
EPKFDMLAYQETIIENIPIGTTVLKVNAYDADSNLFGKINYTLLSDDFLPLEINDLGVIV
TMDEIDREQQAEYSFDVVACDNGETQKCSQASVRLTIRDLNDNAPKFEQKVYNSSISEES
PLGSLVETVRAIDVDEEANGRVTYKILSGNDRGSFSLITQMGYGTLSIAKSLNYKQQNQY
ILVICATDSLFNDTTTVYISITDANLNRPYFIGTPYHFKISEDTATGQVVFNVTASDLDS
GENARISYFLNVNDYFSISENTGEIKLKHSLDRETSSSHTLTVTATDHGRPPKTEYADVE
VVVLDANDNPPTFLKQFYKGSILEDANVGSSVVTVQARDADEGVNKRIKYSLINHLEEFK
IDSSLGIIRTIKDLDREKTHEYKLVVLASDGGKVSLTSSTTVTIDVLDVNDNAPVFERAN
LVFHVKENVPLSTLVGEINAHDSDEGANAVVEYFLLPEMDYEHFKLIPSPSANIATLETD
TELDFESDRNEFLLNVRARSNHLFTDALVKIIVTDVNDNIPIVNDFTVLYNNYKDNFNSG
MIGVVPARDPDVTDRLKFKFVQGNEGRLIHLNETSGMMRLNPRLNSDMPTNATLLLSVTD
GLNEVRVLCHIEVRLVTDEMLQNSVVLHLLQINQRLFLGPPYHAFVSALAAIVSTTADNI
YVIDVANDSLNSKKDNLVMNVTLAVKERVEYGRDIFYSGKVLRERIYTHMSLLQKLSLIQ
VLPFDDDDICHREPCLNFEDCHVTFEFSGATNMANNEFMFYRSVHTRSHFSCSCRRGFTG
KEYDNMCDMEVDLCYSSPCLNNATCLTVEAGHKCLCPFQYAGVHCEIDLTVTSSNKMLLT
GTSNSVTDLANIPCPAEQKNFCKHPSSCFLVKTCPLQTHRQQDHQEQTLPQCSYVACCLI
CDQTSCHDCANKPGYTKFCELRVRSFGGKTHGKDEDVDDDVDEIRSGRHHVGASYIAFPA
DGLLFYNGRYNKHHLDFIMLRMVGGQLKFSFSLGSHQVTTVHSHVENRVNTGRWIQLNII
YYNGTATLIVGEDCDAQLLLKKEAHLDEHSCAQQATQHLDGRCSDVTELCHRHLDLTGPF
YVGGLPDDDNLRSHLLQMLAVDGSENNQHEGHPVDVSDDDVEETAEVGSSEAQNFKRAKR
VCRSLWSDFICDCEDGFSGKTCNNSGQHGLPLIVYPWMVALHFRTTHRNGVLLAVQLNKL
HGNDDEQNADHHYDHLILQVKNGFLQCRMPFSSSSSSSPLLSMDVVSSGINDGQWHHVLV
TWNASCVTFQLDYSSAKVSYSLTDQLTGYRVKDISVGALLKGEGEQVVATEGFIGCFKLL
RVGGNMNMPFVERMLHDVTEGCHASNRCMEESGNVEVEGSVKKCNNATSVCVDVFDTLEC
VCDRGFQGENCKSVCDLGRHACQEGVTKCVQNSTTFYGYECVTENILLLQHQLTMQQQQQ
QQQMQQLLLKLQQLHSLKQHKSHVTFDVQHRFNLHQLLFYQRLLQRAQELQQTYQHRQHE
QQQQKCPPSWWGWPTCGPCNCQSNKGFSSNCDQKTGTCFCKANHYLRGSSCLPCDCYREG
SMSFQCDILSGQCPCRADIIGRQCDRCSDLTAEVTGDGCQAVVGACPRSFHSSVWWQRSP
FNATIVGPCPPRMVGMATRHCSHNQGWHDSDVTNCTSELFVDLEKVRLNHSTCLVHDWPL
KRTSLTLNDLNVTFKLLSSVTETNYFILLKWQLKHLQNLVNTLGRTLHADYFKLWTSINE
KEQNSTITLLMNVFRYVDNMVLNMPIIFTQPFDTVHKDIGGTDKLIMLGLDWVDGSRLPS
SSSSSSSSSSSDVITILPKFNNKVKQKEVVAMDTFVQLNFNSPDSHGGQQTLLTETIERP
ADHQMLKSQHGPSLYIGYIIFKSLAHILPKKYDDKFRRSHVTSSSVINSPVIYLSVYNAS
SSSSSSSLSGSLTIEFKSVPKNKYTKPRCISLWNGVWTNKFCKLLNDDDVSYSTCSCKHS
SAFAVMTEPTFDVTKTAGPFIMDVSLYVGIPLSLLFFLVAFVTFSFINFVSTRNISNAIN
MHLTGTLFITYLIFLIGIDKVEHRVI
NT seq
7281 nt
NT seq
+upstream
nt +downstream
nt
atgacctgcttcgaatgctgtcatctgttggaagtcgcagggacgtctgcgggctgtgcc
cgtgattgttacgatgcggaaaggaaaaaaagagctgtaaccaacaggccaccgcttttc
aattccactcaatacattacaaatgtaccggaagaattacctccaggagttgtcctatct
gttggaatatttgctgttgatccagatgatagagatatgggaaagattacttattcatta
tttgctaccaaagatcaaagaagtcagagcatgtttgaaattaatcctgctgatggaaag
ataacaaccagtcagaagttagatagagaatcgatgcctgtgcattatttcaaagttgtt
gccactgattctggtaaacctcgacgcagttcagatgtttctttaattatttatgtgcaa
gatgtgaatgatcattttcctaagtttgaacaaaatttgtatacaaaaattatttttgaa
aatgttggtgtaggaagtgaagttgtaactgttcatgcaagtgatgaagatccagatgag
aatggagaaataatttacaaaattattaataatggagacattgaaaatgtctttgaaatt
gatccccagctgggcatcttaacaaccagtgctcagttggacagagaaaaaaaagacttc
tatgagttgaaagtgctggctatggacagttcagttcaagatatcagattgagttccaca
gttaatgttgaaataacaattcaagatgaaaatgacaacagacctcagttcaagaatgga
tcatatcaatacaagattaaagaagattatgactacatagcgaatcctgtgattggcatt
gttgatgcaactgatgttgatgctggaaacaatggcttggtgagatattcaatcacaagt
ggtaattcattgaatcatttcgtcatagatccaaacgatggtacattgtcattagtgcac
ccactagaccatgagaaagttccttcctacagactttcagtgaaggctcaagacagtgga
caaccagcaatgagtaacaacactgtcgtgcacattgacgttcttgatgtcaatgataat
gaaccaaaatttgacatgctagcttaccaagaaactatcatagagaacattcccattgga
acaaccgtcttaaaagttaatgcttatgatgctgattctaatctttttggaaaaatcaat
tacacattacttagcgatgattttctgccacttgaaattaatgatttaggagtcattgtt
actatggatgaaatagatcgagaacagcaggctgaatactcttttgatgtggtggcttgt
gacaatggcgaaacacagaaatgttctcaagcgtcagttagattgacaataagagatttg
aatgacaatgctccaaaatttgagcagaaagtatacaattcctctatttctgaggaatct
ccactgggttctctcgttgaaacagtgagagccattgacgtagatgaggaagcaaatgga
agagtgacatacaaaatattatcagggaatgataggggatcgttcagtctcatcacacaa
atgggttacggcacactgagcattgcaaagtcattaaattacaaacaacaaaatcaatac
attttagttatttgtgccacagattctcttttcaacgacacaacaactgtttatatctca
attactgatgccaacttaaataggccatatttcataggaactccgtatcattttaaaatt
tcagaagatactgcaactggccaggtagtttttaatgtaactgccagtgatttagactcc
ggtgaaaatgccaggatatcgtattttttaaacgtcaacgattatttttcaattagtgaa
aacactggcgaaataaaactgaagcactcattggatagagaaacgtcatcttctcatact
ctcacagtgacggccacagatcacggtagacctcctaaaacggagtatgcagatgttgag
gtcgttgtcttggatgcaaatgacaacccgcctacattcctaaaacagttttacaaggga
tcgatccttgaggatgccaacgttggtagcagcgttgttacagtgcaggctagagatgct
gatgaaggagtcaataaaagaataaaatatagtttgattaatcatttggaagagtttaaa
attgattcatcacttgggataataagaacgattaaagacctggatagggaaaaaacacat
gagtacaaacttgtggtgctagctagtgatggaggtaaggtatcgttaacatcatcaact
acagtcaccattgatgtattggacgtcaacgacaatgctcctgtttttgaaagagcaaat
ttagtgtttcatgtgaaagaaaatgttcctctatcaacgttggttggagaaattaatgca
cacgattctgatgagggcgcaaatgcagttgtcgaatatttcctcctgcccgagatggat
tatgaacatttcaaactgatcccatcaccttcagcaaacattgcaacgttggagacagat
actgaattagattttgagagtgacagaaatgaatttttgttgaacgtacgagctcgatcg
aatcatctcttcacagatgccctggtcaaaatcattgtcacagatgttaatgacaacatc
cccatcgtaaatgatttcacggtgctgtacaataactacaaagataatttcaattctggt
atgatcggtgttgtcccggctcgcgatccggatgtcactgatagactgaagttcaagttt
gtgcagggaaatgaagggaggttgattcatttgaatgaaacttcaggaatgatgaggttg
aatccaagattgaactccgacatgcctaccaatgctactctacttctcagtgtaactgac
ggattgaatgaagttcgagtgctctgtcacattgaggttcggctagtcactgacgaaatg
ctccaaaacagcgtcgtactccacttgctccagatcaaccagcgcctcttccttggacct
ccctatcatgcatttgtgtctgcactggctgccattgtctcaaccacagccgataatatc
tacgttatcgatgttgctaatgattctcttaattcaaagaaggataatttagtaatgaac
gtgacattggctgtgaaggagagggttgagtatggtagggacatcttctacagtggtaag
gtactcagggagagaatatacacccacatgtcacttcttcagaagttgtctctcatacag
gtccttccttttgacgacgacgacatctgccacagggaaccctgcctcaactttgaagat
tgtcacgtgacatttgaattttccggcgctacgaacatggcgaacaatgaattcatgttc
tacagaagtgttcacactcgttctcatttctcgtgctcttgccgacgagggtttacaggt
aaggagtacgacaacatgtgcgacatggaggtagatctctgttactcctccccctgcctc
aacaacgccacctgtctgacagttgaggctggccacaagtgtctctgtccttttcagtat
gctggtgtccactgcgaaattgatctgaccgtcacgtcaagtaacaaaatgcttctcact
ggaacttccaactctgtaaccgaccttgcaaacattccatgtccagctgagcagaagaat
ttttgcaaacatccgtccagctgtttcctcgttaaaacatgcccactccagacgcatcgt
caacaagatcaccaagaacaaacgcttccacagtgttcatatgttgcttgttgtttgata
tgcgaccaaaccagctgccacgattgtgctaataagccaggttacacgaagttctgtgaa
cttcgagtgagaagttttggaggcaaaacccatggtaaagacgaagatgtcgatgatgat
gttgatgaaataagaagcggtcgtcatcatgttggtgcatcctatattgcttttccagca
gatgggctgttgttctacaatggaagatacaacaaacatcacttggacttcatcatgttg
aggatggtcggtggacaattgaagttttcgttctccctcggttcacaccaagtaacgact
gttcactctcatgttgagaacagggtgaacacgggcaggtggattcagttgaacatcatc
tattataatgggactgccactcttatagttggagaggattgtgatgctcaactgttactg
aagaaggaagcccaccttgatgagcattcatgcgctcagcaagcaacacaacatttagat
ggcagatgcagtgacgtaacagaactctgccatcgccatcttgatctcactggtccattc
tacgttggaggcttgcctgacgacgacaacctccgcagccacctgctccagatgctcgca
gtcgatggaagtgaaaacaatcaacatgagggccaccctgtggatgtttcagacgatgat
gttgaagagactgctgaagttggatcatctgaagcacaaaattttaaacgtgcaaaacga
gtttgtagatcactgtggagcgacttcatttgcgattgtgaggatggattttctggaaag
acatgtaacaactcaggccagcatggactgccccttatcgtctacccctggatggtggct
cttcatttcaggacgacccatcgaaatggtgtgctgcttgctgtccagttaaacaaactt
catggaaatgatgacgaacagaatgctgaccatcattatgatcatttgatcctgcaggta
aaaaatgggtttttacaatgtaggatgccattttcgtcttcgtcgtcttcgtcaccgttg
ttatccatggacgtggtcagcagcggcataaatgatggtcagtggcatcacgtgctagta
acttggaatgcttcttgcgtcacctttcaactcgattactcatctgccaaagtcagctat
tccctgaccgatcagctgactggttatcgggtcaaggacatctcagttggtgcgttactt
aaaggtgaaggtgaacaggtggtagctactgaaggtttcattggatgtttcaagctattg
agggtaggtggcaacatgaacatgccgtttgtggagaggatgctacatgacgttactgaa
gggtgccatgccagcaacaggtgcatggaagaatcaggcaatgttgaggtggaaggcagt
gtgaagaaatgcaacaacgcaacttcagtttgtgttgacgtgtttgacacgctggaatgc
gtttgtgatagaggtttccaaggtgagaattgcaaaagtgtgtgtgacctcggcaggcat
gcttgtcaagaaggagttacgaaatgtgttcagaacagtacaacattttatggatacgaa
tgtgtgacagaaaatatcttgctgctacaacatcaactcaccatgcaacagcaacaacag
cagcaacagatgcagcagctgttgttgaagctgcaacagctgcactctttgaaacaacac
aagtcccacgtcactttcgatgtgcaacatcggttcaacttgcatcagttgttattctat
caacgtttgttgcaacgagcacaagaacttcaacaaacttatcaacatcgacagcatgaa
caacagcaacaaaaatgtccgccatcttggtgggggtggcccacgtgtggcccatgcaac
tgccaatcaaacaaggggttcagttccaactgcgatcagaaaactggcacttgtttttgt
aaggcaaaccattatttgcgtggatcttcatgcttgccgtgtgactgctacagagaaggt
tctatgtccttccagtgcgatatcctgtcgggtcagtgtccttgtcgagctgacatcatc
ggaaggcagtgtgacaggtgtagtgatctgacggcggaagttactggcgatggttgccaa
gcagttgttggtgcgtgtcctcgatcgttccactcatccgtctggtggcagaggagtccc
ttcaacgccaccatcgttggtccatgccctccaaggatggttggcatggcaacgaggcac
tgcagtcacaatcagggatggcacgacagtgatgtcactaattgcacttcggaacttttt
gttgaccttgaaaaagtgcgcttgaatcactccacatgtctcgtccacgattggccactg
aagagaacgtccttgacattgaacgacttgaacgtgaccttcaaactgttgagcagtgtt
actgaaacgaattacttcatactgttaaagtggcagttgaaacatttgcagaacctggtg
aacacgttaggaagaacattgcatgctgattatttcaaactttggacgtcaatcaacgag
aaggagcaaaactcgacgattacgttgttgatgaatgtcttcagatacgttgacaacatg
gtcctcaacatgcccatcatcttcacgcaaccctttgatactgttcacaaggatataggt
ggtactgataagttgataatgcttggattggattgggtggatggttcacgtctcccatca
tcatcgtcgtcgtcgtcatcatcatcatcatctgacgtcatcaccatcctaccgaagttc
aacaacaaggtcaaacaaaaagaggttgtcgccatggatacgttcgtccagttgaacttc
aactcccctgattcgcatggtggtcaacaaacacttctaaccgagacaattgaacgccct
gcagaccaccaaatgttgaagtctcaacatggcccttcactgtacattggttacatcatc
ttcaaatctctggctcacatcttgcctaagaaatacgatgataagttcagacggtcgcac
gtgacgtcatcatcggtcatcaactcacccgtcatctacctgtccgtttataatgcgtca
tcatcgtcgtcgtcatcatcgttatcagggtcactgaccatagaatttaaatcggtacca
aagaataaatacacaaaaccgaggtgcatcagcttatggaacggcgtgtggacgaacaag
ttttgcaagctgttgaatgatgatgacgtgagttacagcacttgctcgtgcaaacattca
tctgcatttgctgtcatgacggaaccaactttcgatgttaccaaaacagcaggtccattc
ataatggatgtctccttgtacgtcggcattccactctctctcctcttcttcctcgtcgcg
tttgtcaccttcagtttcatcaacttcgtttccacgcggaacatcagcaatgccatcaac
atgcacctgacaggcaccttgttcatcacttacttaatatttctgataggaattgataaa
gttgaacacagggtgatttaa
DBGET
integrated database retrieval system