Helobdella robusta: HELRODRAFT_170497
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Entry
HELRODRAFT_170497 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_170497
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
HELRODRAFT_170497
Factors involved in mRNA localization
Other mRNA localization factors
HELRODRAFT_170497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
CoV_NSP7
Motif
Other DBs
NCBI-GeneID:
20203246
NCBI-ProteinID:
XP_009014564
JGI:
Helro1_170497
UniProt:
T1F347
LinkDB
All DBs
Position
Unknown
AA seq
1226 aa
AA seq
DB search
MSVTNLPELLTTINSLPNLIPEKQQNQQQPQLQRQQNNDLCNSRGGGICHTCHTDKDFSD
RSVYVHAFDKYQQEANEIAHLMELIETSKKFCGILYTWRSCTIPIPKNLPPEGCPAVMEV
LEKEVKKLIDFYHFQKIAVESLRSEISRFGSAASTEFISKTYISLFCQFISSIATLDELK
NIKASIKNDFAHYKRNLRKTNAQQEHISKMSDLSIFLGTHNSILTELKKLLLGVTNHEDF
LCHVVVTCVIKYEQKCFLLPEEKYDLVKVIGFLLYLMDGPKFNINKTKKLNISKIDNILK
EVDVIPLYGDMTFRSFNYIQKAANYEASYWPKCSSADPSPQSSLVNVISIFRQQHSNVVM
EFTEAMKKVLDVTMVDSAFKKNINNNNNINNNNNISIPTTEQMTAAYNIALLCLQTLSGW
TSAVVELVTKYNYSSEEKTALVELIGYIKGLYNLFHKNLITISSFINVYIFKQLQQFVNI
DMSEPLRKAAKHHKDVFLLTAIQNTCADTSCLHKSEVSDKKSKKSEAVVVKGKQAPPSNT
QLYLARSMLDYLINNDSKVASSKHPCKDLDSQHVKCIREFLINSHMWKYVMQLQNCLNAC
SDLSQLWYRECYLEMTKGLEIQFPIEQSFPWILVSHILEKRDPYLIHFVLYMFDLYNDSA
NTALYTFKKQHLFEEVEAELLGRSVDLQQRITQSMNELLIKSLNIAISRFEFSDVTGIVE
LETLVRINKETHKRLNKYLPLDDFAILWREANSNVTSPYGRIAVYILLELTSDFLPHYCY
NSSTGRFVQTVLPFADKTTRDRPPNVAACHLYGNKALAQCYQCIHGMYSNFFGAPHFTAM
VELMGYQDVAMLAKELMENIRSLIRNTLVPYTTSLQSVMPEKCILPRYDYTSPGVLGYYE
MQLEAILTYSDLQPKVFQCMREIGNSILFVMLIEQYQSIREVSELNMAGMFLKVIPKPYV
PEDDKKTSEELETERAKLTLELENKYRHLNLQAIMSRNCNEEDFTLCKENILLSRDKLAC
GLYVFKTFLVQLQDELLSIEDPVFHGKPSNATSSATLWCVQSNKEFHRVWSAMQFVMCRT
LGQNELTVEELFGEGINWGGCSIVFLLKQHRRFQIMDCCYHLYKVNRVDQIDKVCSGVPL
RKMVDRIRKFQIVNDEIFSCLERQFKPSDREISVSDFGVEVEYLMPTPPPPSSNANVAGV
VVDSAAAGGRGGDGDKAGVGGGTSFV
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtaacaaatcttcctgaactactaacaaccatcaactcactaccgaacttaatt
cccgaaaaacaacaaaaccaacagcagccacaattgcagcgacagcaaaataatgatctt
tgcaacagccgaggcggtggcatctgccacacgtgccacacggataaggatttctccgac
agatccgtctacgttcacgcatttgacaagtatcagcaggaggctaatgaaatcgctcat
cttatggagttgattgagacgtcaaaaaagttttgtggcatactttatacatggcgaagc
tgtaccatcccgatacctaagaatcttccgcctgaggggtgtccagcagtgatggaagtc
cttgagaaggaagttaagaaactcatcgatttttatcacttccaaaagatagctgttgaa
agcttgcgaagtgagatatcacgttttggttcggcggctagtacggagttcatctcaaag
acttacatctccctcttctgccagttcatcagctcgatagctacgttggacgagctgaag
aacattaaagccagcatcaagaatgatttcgcccattataaaaggaaccttcgtaagacg
aacgcccagcaagagcacatcagcaagatgagtgatctctccatctttctaggcacgcac
aacagcatcctcaccgaactcaaaaagctgctgctaggtgtcacgaaccatgaagatttt
ctgtgtcacgtggttgtgacgtgcgtcattaagtacgaacagaagtgtttcctgctaccg
gaagagaaatatgacctcgttaaggtgataggtttccttttgtatttaatggacggtccg
aaattcaacatcaacaaaacaaagaaactcaacatttcaaagattgacaacattctaaaa
gaagttgatgtgattccattatatggggacatgacgttccgttcatttaattatattcaa
aaggcggcaaattacgaggcttcctattggccgaagtgttcgtcagctgatccgagccct
caaagctcattggtcaacgtaatttctatttttagacagcagcatagtaatgttgttatg
gagtttactgaggctatgaaaaaagttctagacgttacaatggttgactcagctttcaag
aaaaacatcaacaacaacaacaacatcaacaacaacaacaacatttccattccaacaaca
gagcagatgacagcggcatataacattgcactgttatgtctgcaaactttgtctggttgg
acctctgcggtcgttgaattggtcacaaagtacaactatagttcagaagagaagacagcc
ttagtagagttaataggctacataaaagggttgtacaacctcttccataaaaacctcata
acgatatcctctttcatcaacgtctacatattcaaacaactgcagcaattcgttaacatt
gatatgagtgaaccactgaggaaggcagcgaaacatcataaggatgttttcttacttaca
gccatacaaaacacgtgcgctgacacttcatgcctccacaagtctgaagtttcagacaag
aagtccaaaaaatcggaagcggtcgtcgttaagggcaaacaagctccaccctccaacacc
cagctctacctcgcgcgttccatgctcgactatctgattaacaacgacagcaaggtggcc
agtagcaaacatccatgcaaagacctggacagccagcatgtaaaatgcatcagggagttt
ctcattaacagtcacatgtggaaatacgttatgcagctacaaaattgtttgaacgcctgc
agcgatttaagccaactctggtatcgtgagtgctacctggaaatgaccaagggtttggag
atccagttcccaatagagcaatcgttcccttggatacttgttagtcacatattggagaaa
agagacccttatttgattcattttgtattgtacatgttcgacctgtacaatgattctgca
aatacggctttgtacaccttcaagaagcaacatttgtttgaagaagttgaggctgagttg
ttaggaagatcagtggatttgcagcagcgcatcacacagtctatgaacgaactcttgatc
aaatcactgaacatcgccatctcgagatttgaattctctgacgtcactggaattgtggaa
ttagagactctagtacgcataaacaaagaaacccacaaaaggctgaacaaatatcttcca
cttgacgatttcgccatcctttggcgagaagcaaactcaaacgtgacctctccttacggc
cggatcgccgtctacatccttctggaactgacttccgacttcctcccgcattactgctac
aattccagtacaggcagattcgtccaaacggttcttccttttgccgacaagaccacgcgc
gaccgaccgccaaacgtggccgcctgtcatttgtacggcaacaaggccctagctcagtgc
taccaatgcatacacggcatgtatagcaacttcttcggcgctcctcacttcacagcaatg
gtcgaactaatggggtaccaagatgtcgccatgctggccaaagaacttatggagaatatt
aggtctttgataagaaacactttggtaccctatacaacgtcactgcaaagtgtcatgccc
gaaaagtgcatacttcctagatatgattacacatcacctggagttcttggttattatgag
atgcagttggaagccatcctgacctactctgacctccagccaaaagtcttccaatgtatg
cgtgagattggaaattctatactgttcgttatgctgattgaacaataccagtccatccgc
gaagtttcagagttgaacatggctggcatgtttctcaaggtcattccaaaaccttacgtt
ccggaagatgacaaaaaaacgtcagaggaattagaaaccgagagggcgaaattgacgctc
gaactcgagaacaagtatcgccatcttaacttgcaggccataatgtcaaggaactgcaat
gaagaggactttacactatgtaaagagaacattctcctatcaagagacaaactggcctgc
ggactctacgtcttcaagaccttcctggttcaactgcaagacgagctgctatcaatcgaa
gatccagtatttcacggcaagccgtcaaacgctacctcatcggcgaccctgtggtgcgtg
cagagcaacaaggagtttcatcgcgtctggtcagccatgcaattcgtcatgtgcaggact
cttggacagaatgaactgaccgttgaagagttgtttggcgaaggaataaactggggtggt
tgctcaattgttttcctattaaagcaacatcgcaggtttcagataatggattgctgctat
catctgtacaaggttaacagagttgatcagattgataaagtctgctctggcgttcccttg
aggaagatggtagataggatcaggaagtttcagattgtgaacgacgagatattctcctgt
ctggagaggcaattcaaaccaagcgatcgagaaatatccgtttccgattttggagtcgaa
gttgagtacttgatgccaactccacctccgcctagttcgaacgcaaatgtcgccggtgtg
gttgttgattctgctgctgctggtggtcgtggtggcgatggtgataaggcaggtgttggt
ggtggaactagtttcgtctga
DBGET
integrated database retrieval system
