Helobdella robusta: HELRODRAFT_170722
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Entry
HELRODRAFT_170722 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
hro
Helobdella robusta
Pathway
hro04150
mTOR signaling pathway
hro04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
HELRODRAFT_170722
04150 mTOR signaling pathway
HELRODRAFT_170722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hro04131
]
HELRODRAFT_170722
Membrane trafficking [BR:
hro04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
HELRODRAFT_170722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
cEGF
EGF_LRP2
Motif
Other DBs
NCBI-GeneID:
20203329
NCBI-ProteinID:
XP_009014764
JGI:
Helro1_170722
UniProt:
T1F3D0
LinkDB
All DBs
Position
Unknown
AA seq
1959 aa
AA seq
DB search
MSCIFVLFLCLPQIILVFFPTAGYVDGTLLVYSTFKSICLVDVSEDRRADDKSQVLFRDG
YTISTVDYLRDENTIFWMDSDENSVLKLESYNATHEIKTSLASLHDSVLMDMSIDWVGLK
MYWLDQDGRIEIRDLFEFDRAVVVFNNLIQPGSLVLYPEKRLMFWSTCGDVPYIESASMD
GRDRKIVLSLNECISWPSGLTIDYENDMLYFVIEASRRVYKCNLDGSNLSLVSPNNVNNN
MNPLSISIHNGMMYWIELTNSTIIRCKLPQCSDPRILANTLFPPQDVKVVRPERKNMNVE
NPCSKNNGGCSYICLLSAVTSQQYTCACPAGVVLKKDGRNCEDGPSSILLFVRYTNLQWV
SLDTPDYIHVPIPIDSIKKAISIDYDPIQGMIYWSDFNRSSIGRALLNGSTNMYTEVETV
IQVPGMNPEGIAVDQLGRNIFWVDSGQKKIIVAKMDGSYYRKDLITTELYNPRAIVVDSK
RGNLYWSDWGTHPKIETSQMDSSSRQILVTSNLSWPNGLAHDGVANRLYWGDAKLHRIEY
IDLKTKRRVLLVEGDYLYWSDLTDRVIQRIHKSEPANQSQTIIENISDLMSLKATYLEST
SDPDAGDDVCMKKNGGCSHFCFLSPLPTHQRPVCFCPDGFEMAPGDNQTCFSTQSFVVFS
TKGDFGRVTMETGNVAAMATTKSGYGVVVGFDVDVRGSGGGGGDGGVLYWGDEASNSIRR
KEFSGPQQQESFISNVNPGAIVIDSIHSTLYWTDVGKNCIEMITLKGRGYRKVVLWKDVT
PTLLAVDPLNGYLFWLNRGAKLNHWSIERSSLIGSFRTKMVANNDDNNKNNNKRGVGDSE
EDGGVTSIAVQPSKKLLYWLRNGTLYWKHYDRSTIDTYERKDSKFTLVSILSDSLLLYDP
SSAEVYQFNLSDHSIGDGLFGNLVKKYQLRLNNNNNNNNNKNYYNNNNNNNNNRDDGHDV
IGLSLVDFSIRPNISHPCKESNGGCSHICLTNSNYNNINDDYKITNINNNNNNNNNNNNN
NNKYICSCPTHYRLLKDGHTCQGPTSFIIASQKNSFLQILVNAMNKSGNTNGKNNKSNNN
DGDDDDDFVTSLPDLGINNFRSLTYDPFKGHLIWVDSQGSTIKSTYYPISGSSYFGSSGS
NNSSGNNGRVRGSKNVGRSRGSSNNRGVFGVHLNVNNEVPHPTVTIVSSSSPSSSSSSSA
YIFDLTIDYNSRLIYFSNLSCSCVQAVRFDGRMVGTVIKEGSPRYLVMASKAGYLFWTNK
GKRLERSSLDGSLKMTILNTGLGQLGPIEVDDYSTPTSYKSGRVYWIDVELKRIESSNLD
GGDRRVIVHDTGREQATGLAIANDLLLWATKSGSIEKVSSANGAGREVVYKKSGSPITSL
LFSKYKSNIMPIFKATQQLDASDKVSYQHGDDVYNKYGFCPTETCTDICLVEYENTLSMD
SEDVDEAKWRCSCPFGMQLGDDASTCTASTPCKMNQFQCRTHLFCIPREYVCDDHADCDD
HSDEADCPKTPRRQSTHASNVHPEFCTEPENVWCPGGDACISREFLCDGKYDCVDGLDES
NCPNDGNSSFLLANGYAIGIGVVAAFVVGLTLILLLFFICRQKSRKLATAYPDDVVMVAR
PNAPPSTASFSAPDSNSLLLKSTDISVDGSQVFAEVNSDDCEVRNDDDVGDDFPHRKLGN
GHHLPNKRLKHQQPTYSRRNKDTMTSSIAGVFYGDDVTEICSGVHPDSLYYDRGHITGAS
STTGSVMTARPAFDPPPSPITDRSTIADVEEPAVPRPQLHHARRHQNSGRVLPENLYPNP
HFDSSATNPWGKNPGKRKKLRHKRHRRYVPTPCSSTADELMVMTHFDEFQPNLAPPPTPL
SDYIQSRNSLFSPDVSCPPSPFTGRSNYPPPPPSSYFNEEEEEHGYDDDDDVISDNDDDD
GFAGGNINNGGALVNVLSSLGHGSHNDAKNGIIKKKDCV
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtatatttgtcctgtttctatgtcttccacagataattctagttttcttcccc
actgcagggtatgttgatgggactcttctagtttattcaacattcaaaagcatctgccta
gttgacgttagtgaagatagaagagcagacgataaatctcaagttctgttcagagatggg
tatacaatatccactgttgactacctccgtgatgagaataccattttctggatggattct
gatgagaattctgtcctaaaattagaaagctacaacgcaactcatgagataaaaacatca
ctcgcctccctgcacgactcagtcctgatggatatgtcaattgactgggtggggctgaag
atgtattggctggatcaggatggcagaatagaaataagagatttgtttgagttcgatagg
gccgtcgtcgttttcaataatttaattcagcctggcagtctggtgctataccctgagaaa
agattgatgttttggtcaacctgtggagatgtaccctacattgagtcggccagtatggat
ggtagagatagaaagattgtactgtcgctgaacgaatgtatatcttggccaagtggtctg
acgatagattatgaaaatgacatgctgtactttgtgattgaagctagcaggcgagtgtat
aaatgcaatctcgacggttccaacttgtcgttggtatctccaaacaacgtcaacaacaac
atgaatcctttatccatctcaatccacaatggcatgatgtactggattgaactgacaaac
agcacaataattagatgcaaacttcctcagtgttcagacccaagaatcctagcaaacacc
ctgttcccaccccaagatgtcaaagtggtacgacctgagagaaaaaatatgaatgtggaa
aacccgtgttctaaaaataatggcggttgctcgtacatttgcttgctgtcagcagtgaca
tcacaacaatacacatgcgcctgtccagctggtgttgtgctgaagaaggatggaagaaac
tgtgaagatggtccctccagtatcctactgtttgtgagatacacaaatttacaatgggta
tccttagataccccggattacatacacgtccctatcccgatcgatagtatcaaaaaagcg
atatctatcgactatgatccaatccaaggaatgatatattggtcagatttcaatagatca
tctattgggagagcacttcttaatggatcaacaaacatgtacacagaagtggaaacagtc
attcaagttcctggcatgaatccagaaggcatagctgtagatcaactgggcagaaatatt
ttctgggtggacagtggccagaaaaagataattgtagccaaaatggacggaagttactat
cggaaggacctcattaccactgaactttataaccccagagccattgttgtcgactctaaa
aggggaaacttatactggtccgactggggcacccacccgaaaattgaaacctctcagatg
gactcttcctctaggcagattctcgtgacctctaacctttcgtggccaaatggactcgcc
cacgatggggttgcgaatcgtttgtactggggtgacgccaagttgcataggatcgagtac
atcgatttaaagactaagaggagagttctgctggtggagggtgactatttgtactggtcc
gacctgacggatagagtaattcaaagaatccacaaatccgaaccagcaaaccaatcgcag
accatcatcgagaatatatctgacctcatgtctctcaaagccacctacttggaatctact
tcagacccagacgctggcgacgacgtctgtatgaagaaaaacggcggctgtagccacttc
tgcttcctatctccactccctacacaccagcggccagtttgcttctgccccgatggtttc
gaaatggccccgggcgacaaccaaacatgcttctccactcagtccttcgtcgtcttctct
accaagggtgacttcggcagagtaaccatggagaccggtaatgtggcggctatggcgacc
acgaaatcaggctatggtgtcgttgttggcttcgatgttgacgtcagaggaagtggtggt
ggtggtggtgatggtggtgttttgtactggggcgacgaggccagcaactcaatcaggagg
aaagaattcagcggacctcaacagcaggagtcgttcataagtaacgttaacccaggtgcc
attgtgattgacagcatccattcaactctctactggaccgacgttgggaagaactgcata
gaaatgataacactgaagggtcgtgggtacaggaaggtggtgctctggaaagatgtgacc
cctactcttctagctgtggaccccttgaatggctatctattctggctgaatagaggtgcc
aagctgaaccattggagtattgaaaggtctagtttgattggttcctttagaactaaaatg
gtggctaataatgatgataataataagaataataataaacgtggtgttggtgatagtgaa
gaggatggtggcgtgacctcaatagcagtacagccatctaaaaagttattgtattggctt
agaaatggcactctatattggaaacattatgacagaagcaccatagatacgtacgagagg
aaagattctaaattcactctggtgtccatactttctgattctttgcttctgtatgatcct
tcgtctgctgaggtgtatcagtttaatctgagcgatcacagcattggtgatgggttattt
ggtaatttggtgaaaaagtatcaattgaggctaaataataataataataacaataataat
aagaactactacaacaacaacaataataacaacaacaatagagatgacggccatgatgtc
attggtctatctctggttgatttttccataagaccaaacatttcgcacccgtgcaaagag
agcaatggcggttgttctcatatatgcctcactaacagcaattacaacaacatcaacgac
gactacaaaattactaacatcaataataataacaataacaataataataacaataataat
aataataaatatatatgctcatgtccaacacattacaggctgcttaaagatggtcatact
tgccagggaccaacaagcttcataatagccagtcagaaaaattccttcttgcagattctc
gttaatgcgatgaataagagcggcaatactaatggtaaaaataataaaagtaataataac
gatggtgacgacgatgacgatttcgttacgtcacttcctgaccttggcataaataacttc
aggtcgctgacatatgacccatttaaaggtcatcttatctgggttgattctcaaggttca
accatcaaatccacctattaccctatcagtggtagtagttactttggtagtagcggtagt
aataacagtagtggtaataacggtcgcgttcgaggcagtaaaaacgttggcagaagccgc
ggtagtagcaacaatcgcggtgtcttcggcgtacatttgaatgtgaacaatgaggttcca
catcccactgtaacgatagtttcctcttcttctccttcttcttcctcatcttcatctgcg
tacatcttcgacctgactatcgactacaattctcgtctcatctacttctccaacctgtcg
tgttcgtgtgtgcaggccgtcagatttgacgggcggatggtgggcactgttatcaaggag
ggcagccctaggtatctcgttatggcctctaaagccggatatttgttctggacgaacaag
ggtaaacgattggagagatcgagtttggacggctccttgaagatgaccatcttgaatact
ggacttggacagctcgggcctattgaagttgacgattatagcactcccacgtcctacaaa
agtggtcgggtatactggatcgacgtcgaactgaaaagaatcgagtcgtcgaacttggac
ggcggcgatcgtcgcgtcatcgtgcacgacaccggcagggagcaggccacaggactcgcg
atcgccaacgacctgctactgtgggcgacgaaatctggcagtattgagaaggtgagttct
gcaaacggtgccggtagagaggtcgtctacaagaagtcaggcagtccaatcacatctctc
cttttttccaagtacaaatcaaacatcatgccgatatttaaagccacacagcaactcgac
gcttcagacaaagtgagttaccagcacggcgatgatgtctacaacaaatatggattctgt
ccaacagaaacttgcacagacatctgcctcgtcgaatacgagaatacgctgtccatggat
agtgaagatgtggatgaggccaaatggaggtgctcctgtccatttggcatgcaactgggc
gatgacgcgagtacgtgcactgcatccacgccatgcaagatgaaccagtttcaatgtcga
acccacctcttttgcatccctcgtgaatacgtgtgcgacgatcatgcagattgcgatgac
cactcggatgaggccgactgccccaagactccgagaagacagtccacccatgcttccaat
gtccatcctgagttttgtaccgaaccggagaatgtttggtgtccgggtggagatgcatgc
ataagtagggagttcctctgcgatggcaagtacgattgtgtcgatggattggacgaatcc
aactgcccgaacgacggcaacagcagttttctcctcgctaatggttacgctattggaata
ggagtcgttgcagcctttgttgtgggcctcactttgatacttttgctcttctttatatgc
cggcagaaatcaaggaaactggcgacggcctatccagatgatgtggtgatggtagcccgt
ccgaacgcaccaccatcgaccgcatctttctctgcgcccgacagcaacagtctgcttttg
aaatctaccgacatcagcgttgatggcagtcaggtgtttgcagaggtcaacagtgacgac
tgtgaagttaggaacgatgatgatgttggggacgacttcccgcatagaaagttaggcaat
ggacaccacctaccgaacaaaagattaaaacaccagcagccaacgtattcgaggcgtaat
aaggacacgatgacgtcatccattgctggcgtgttttacggcgacgacgtgactgagatt
tgcagcggtgtgcacccggattcactttattacgacaggggacacataacaggcgcctca
tcaaccaccggatctgtcatgaccgccagaccggccttcgatccaccacctagtcccatt
actgacagaagcaccattgccgatgtcgaagaaccagccgtccctcgtccgcaacttcat
cacgccagacgacatcaaaattccggtagagtcctccctgaaaatttataccccaatcct
catttcgattcgagcgcgactaatccgtggggtaaaaatccgggaaagcgtaaaaagttg
cgtcacaagcgacaccgtcgttacgtgcctacgccctgcagttcaactgcggatgaactg
atggtaatgacgcatttcgatgaattccaaccaaatttagcgcccccgccgacccctctg
agtgattacattcagtcaaggaactccttgttcagtccggatgtcagctgtccaccatca
ccattcaccggtcgctccaattatccacctccacctccgtcatcctatttcaatgaggaa
gaggaagaacatggatacgatgacgatgatgacgtaatcagtgacaatgatgacgacgat
ggttttgctggtggtaatattaataatggtggcgcgcttgtgaatgttcttagctctctt
gggcatggaagccataatgatgcaaagaacggaatcataaagaagaaagattgtgtgtga
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integrated database retrieval system
