Helobdella robusta: HELRODRAFT_173407
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Entry
HELRODRAFT_173407 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K04437
filamin-A
Organism
hro
Helobdella robusta
Pathway
hro04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
HELRODRAFT_173407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hro04812
]
HELRODRAFT_173407
04147 Exosome [BR:
hro04147
]
HELRODRAFT_173407
Cytoskeleton proteins [BR:
hro04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
HELRODRAFT_173407
Intermediate filaments
Intermediate filament-binding proteins
HELRODRAFT_173407
Exosome [BR:
hro04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HELRODRAFT_173407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
20204522
NCBI-ProteinID:
XP_009018263
JGI:
Helro1_173407
UniProt:
T1F6S3
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MTNYPANFFFENTTIGKGQLTVNIVYNGVNIPAKIEQTELSKFHISYNPIGSGTYIIRVY
YDGNEIQGSPFTMEVIDAKDVKTSGEGLNSGEVGERSSFFLNLGPNAFPSDVKVLITTPK
GFPLQPKIIDRGGGNVVVEFSPIEAGEHLIDVRYFDKPISGSPFSCQVTDGNQIYINNIP
PVGSINRPVEFEIDATSAGQGKLEISVNDGNVPCMVDSQGGYRFRASFVPTEAIPHVVRL
RFNGKEVSGSPWMVQVQNPAANAMVSYNFSQNIVVNQVTELEVKLNSLDSEVTASVTGPN
RRSTPASVVNMRNGVHRVEFAPREAGTHLVQISVDGVTVHGSPFVFKAYNPQAIVVTPPG
VGTIGVPVEFTIDASKAGEGQLEIMVNKGSVPNVTRSISKSIFQVSFVPTDPRPHIVDLL
FNKEPIPQSPLSVPIMDARGNMVTSQGASLHEVATNRHSIFRLHQNQQQQQQIHSNLSRS
IAPNGEIVPAKMILQPDGDYKLDYMSKYTGRHRVEITSQGHPIMGSPFYVEIYDPNKIKV
EGNKTGMVGERMELDIIRNQAGKADLKITVKGPRGNLIRYEMFNTPRGERVAYTPTEPGV
HQIHVLFGNLNVPGCPVKQEIFDASIVIAEGEGLVKGLEDHVTSFYVDSRGQKGELKVQV
DGPNSIAKCNITEEFDGRYLVSYIPVEPGFFNIIVKWNGREIEGSPFRPRINALQKVGVI
GGWESLLDKNNHITLICNEKKVIEFDTRGCGQGQLTASLIGPSGSVPLDLRMREKDIYVL
SFLPKDEGEYRLKVFWNGNQIDQSPLVGYIRREVTKTTTKTTTEPIENHYERQQRTTTTT
SYQQQQQHQEVNSDKIILNGIGLQQAAVNQHSEFFIDGSSAGPGSPSITMDGPTGEIPVQ
CLLVTPCKYKCTYYPTIPGIYSLHIKWADRHVIGSPFMVKVQPASAYSNSHYQNTQTLNI
NPYLSPNGAATQFELTQTYQSANQLIPPSLVINPPPSIGAGSVVGGQMGGASGVRCSGEG
LTRAKVGKEISTYIDTRRAGVGELTAQCNGPSKLALCRLVDPKETGVFTLFIKPVEGGTH
TLYIKYNKENINGSPFTFKVSYPPDASKVQCFGAGINPGVVNKFDGVFYVDTYKAGSGEL
GVIVRGPKGGFKVELSRETHNDRRIVCSYHPSEPGDYVISVTWSGEHVPGSPFHIRLAET
DMELKEYLQKNYQGVTHPNDRFDM
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgactaactacccggcaaattttttcttcgaaaacactaccatagggaagggccagctg
acggtcaacatcgtctacaatggcgtcaacatcccggccaaaattgagcagacggagctt
agcaaatttcacatcagttacaaccctatcggcagcggtacatacattatcagagtgtat
tacgatggcaatgagatacaaggttcgccatttactatggaggttattgacgctaaagac
gtgaaaacgagcggcgagggcttgaactctggcgaggtcggtgagaggtcaagcttcttt
ttgaacctcggaccgaatgcatttccatccgacgtcaaagtgctgatcacgaccccaaaa
ggatttccactgcagcccaaaattatagaccgtgggggaggtaacgttgttgtagagttc
agcccaatcgaagcaggcgagcatctgattgacgtgaggtacttcgacaagccgataagt
ggcagtcccttctcgtgccaggtgacagatggaaatcagatctacataaacaacatcccg
cccgtgggctccatcaacagaccggtagagtttgaaatcgacgcaacgagcgctggacaa
ggcaagttagaaatatcagtaaacgatggcaacgtaccctgtatggttgatagccagggg
ggttataggttcagggcctccttcgtacccactgaggcaatccctcacgtcgtcaggctt
aggttcaatggaaaagaagtttcaggcagtccgtggatggtacaggtgcagaatcccgcg
gcaaacgccatggtgtcgtacaatttttctcagaacattgtagtgaaccaggtgactgag
ttggaggttaagttgaacagtctggatagcgaggttactgcttcagttacagggccaaac
aggcgctcgaccccggccagcgttgtcaacatgagaaacggtgttcacagagttgagttt
gcgccaagagaagctgggacacacctggtgcagatctcggtagacggagtaacagttcat
ggcagtcccttcgtcttcaaggcctacaaccctcaggccatcgtcgtcaccccccctggc
gtaggcaccatcggagtcccggtggagttcaccatcgacgcctcgaaagccggcgagggt
cagttggagataatggtcaacaagggcagtgttccaaacgtcacgaggtcaattagcaag
agtatcttccaggtcagtttcgtgcctacagacccgcgtcctcacattgtcgacctgctc
ttcaacaaagaacccataccgcaaagccctctctccgtaccaataatggacgcccggggc
aacatggtgacgtcacagggggccagtttgcacgaggtggccacaaacagacactccata
ttcagactgcatcaaaaccagcagcagcagcagcaaatccactctaatctgtctcgttcc
atagcaccgaatggtgagattgtgccggcaaagatgattctacagccagatggcgactac
aaactcgattacatgtccaagtatacaggtcgtcaccgtgtagaaataaccagccagggt
cacccaataatgggcagtccgttctacgttgaaatctacgaccccaacaagataaaagtg
gaaggcaataagactggcatggttggggagagaatggagctggatattataaggaaccaa
gcaggcaaggcagacttgaagattacagtaaagggtcccagagggaacctcatacgctac
gaaatgttcaacaccccgagaggtgagagggttgcgtacaccccaacggagccaggggtg
catcaaatccacgtactctttgggaacctgaacgtgcctggctgtccggtgaagcaggag
atattcgacgcgtccatcgtcatagccgagggcgaagggctcgtgaagggcctggaagat
cacgtgacctccttctacgtggactccagaggtcaaaagggagagttgaaagttcaagtt
gacggaccgaatagcattgcaaaatgtaacattacggaggaattcgatggcagatatctg
gtctcctacatcccagtagagcccgggttcttcaacatcatcgtcaagtggaatgggcgg
gagatagaaggtagcccttttagaccgcgcataaacgccctgcagaaggtcggggtcatt
ggcggctgggaatccctcttggataaaaataaccacatcaccctcatttgcaacgaaaag
aaggttattgagtttgacaccagaggctgcggacaaggtcaactaacggcgagtctgatt
ggtccatctggaagcgttccacttgacttgaggatgagagaaaaagatatatacgttctg
tcgttcctccccaaagatgaaggcgaatacaggcttaaagtattttggaatggcaaccag
atcgatcagtcgccactggtcggctacataagacgagaagtcaccaaaacaaccacaaag
acgacaactgaaccaattgagaaccactacgagcgacagcagcgtaccacaactacaacc
agctaccagcagcaacagcagcatcaagaagttaatagtgacaagattattttgaatggg
attggtctgcaacaggcagctgttaatcagcattcggagttttttatagatggatcgagc
gccggaccaggcagtccctcgataacaatggacggtcccacgggagaaatccctgtccaa
tgcctcctcgtcactccgtgcaagtacaaatgcacctactatcccacaatccctggaatt
tactctctccacataaagtgggcagatcgtcacgtgattggttcacccttcatggtcaag
gtccaaccggcatccgcctactcaaacagccactaccaaaacacccagactctgaacatc
aacccctacctaagccccaatggggctgcgactcaattcgaactcacgcagacttaccaa
tcagccaatcagctcattccaccctctctcgttatcaatccccctccatcgattggtgca
ggatcggtcgtgggcggtcagatgggtggagccagtggagttcgttgcagtggggaaggc
ttgacaagggcgaaagttggcaaggaaataagtacctacatcgacacgaggagagccgga
gttggtgaactgactgctcagtgtaacgggcccagcaaactggctctctgtcgattggtg
gaccccaaagagacgggggtctttactttgttcataaagccagtggaaggtgggacgcac
acactgtacatcaagtataacaaagagaacattaatggcagtccgttcactttcaaggtt
tcctacccccctgacgccagcaaggtgcaatgtttcggagccggtatcaatcccggtgtg
gtcaacaaatttgacggcgtcttctacgtcgatacgtacaaggctgggtcgggagagttg
ggcgtcatcgtccgagggccgaaaggtggattcaaagttgagctatcgcgcgaaacacac
aatgaccgccgaatcgtctgctcctaccacccatccgaaccgggcgattacgtcatttct
gtcacgtggtctggagaacacgtgcccggaagtccattccacattcgtctggcggaaacg
gatatggaactgaaggagtacctacagaagaactaccagggtgttactcatcccaacgat
cgattcgacatgtaa
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