Helobdella robusta: HELRODRAFT_173544
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Entry
HELRODRAFT_173544 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hro
Helobdella robusta
Pathway
hro03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HELRODRAFT_173544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_173544
03009 Ribosome biogenesis [BR:
hro03009
]
HELRODRAFT_173544
Messenger RNA biogenesis [BR:
hro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HELRODRAFT_173544
Ribosome biogenesis [BR:
hro03009
]
Eukaryotic type
Pre-60S particles
RNases
HELRODRAFT_173544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
20204586
NCBI-ProteinID:
XP_009018413
JGI:
Helro1_173544
UniProt:
T1F6Y7
LinkDB
All DBs
Position
Unknown
AA seq
207 aa
AA seq
DB search
MYGRHGYFNSVFKRYSNTNSLTTSNYVMDKRLVWVDCEMTGLDVDKCHLLEIACLITDDQ
LNIVAEGPNIVIHQPDEILNSMNNWCLKHHSESGLMEQVRNSRISVKQAEMELLSFVRQH
TPPGMCPLAGNSIHVDKKFLEKYMPQFSSHFHYRIVDVSTIKELASRWYPDHSDLAPVKK
MVHRAMDDILESIAELRFYRSTFFKML
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaaggcatggttacttcaattcggttttcaagcgttacagcaacactaattca
ctaacaaccagcaattacgtgatggacaaacgattagtgtgggtcgattgtgagatgaca
ggattggatgttgataaatgtcatcttctggaaatagcatgcctcatcacagacgaccag
ctgaacatagttgcagagggccccaacatagtgatacatcagccagatgagatattgaat
tccatgaataactggtgtctgaaacaccatagcgagtctgggctaatggagcaggtaagg
aatagtagaatatccgtgaaacaggcggagatggagttgctgtcatttgttagacagcat
accccaccagggatgtgcccgttagcaggaaacagcattcacgtcgacaagaagtttcta
gaaaagtatatgccacagttttcatcacactttcattataggattgttgatgttagcact
atcaaagaattggccagtcgttggtatccagaccacagtgatttggcccctgttaaaaag
atggttcatagagctatggatgacattctggaaagcattgcagagttgagattttacagg
tccacattcttcaagatgttgtaa
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