Helobdella robusta: HELRODRAFT_175287
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Entry
HELRODRAFT_175287 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
hro
Helobdella robusta
Pathway
hro04150
mTOR signaling pathway
hro04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
HELRODRAFT_175287
04150 mTOR signaling pathway
HELRODRAFT_175287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hro04131
]
HELRODRAFT_175287
Membrane trafficking [BR:
hro04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
HELRODRAFT_175287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
20205340
NCBI-ProteinID:
XP_009020975
JGI:
Helro1_175287
UniProt:
T1F941
LinkDB
All DBs
Position
Unknown
AA seq
1862 aa
AA seq
DB search
MHNDAILAGVFKCLHNTVLIGFRNSVTRLETDLGGGWRSGDDELLENNDRLARIERCGLN
GNSRKVILSNPDLTAPFSLTLDAIDERLYWFESATLNIMTSDFNGDDVIVFHTIERNHLP
VYTITMAISHSGYLYYTDHSQFSVSAMKKYSKNSDDTEEDVIYDFLGLPDYPQCLRVFEE
NLSYPNRTSEFAHPCSYLSLGGPNPPFYSCACPAGVMLADDDDHDCFEGVIRIILILYSI
QFLTSLPKGSKKILLVVHYSNIRLISLDTTAFADQIINIEYINKDSKVVAADYDPIYEKI
YWTDLKTRAIYRSNLNGSSAEMLLRTNVYEPEGIAVDWLSGNFYWTDAAANKIELVKIPA
SDRSERSNLKFVEPIRKVIIQDGLQKPRAIVVDSFAGYIFWADCSNKRGNKIERARLDGS
ERTLVIDWPTVVWPNGLALDRPMRRLFWVKAKSHVIESSNYDGSDWREVVSRDVVHLFGL
SLIDEFIYWTDWSTNSIGRANKITGGTRSELASDLLELVTVTAVYSKAQYIPNFNSNATS
LPCFEDNGGCSDFCLITPNNNTTTFNEIGGKRRAQCLCPDGFILSGVHMDQCSEVKPNVV
LYINGSLKVLQMEMMGEGERKIEMMMKKGSGFEHNMIFHNSSVVSGTSYNIISNASNVIS
NGYINEVLSNHVELFSLDENNVDSFDWLVRGQSLFWLDGRNKIIYRRNFVEIRAEDQHST
KSVKTPFLTNLQSLPLQTSSSSSSSPSSSSPSSSSSSSTSSIAVDYISGNVYFVISNRIE
MLTSSAKSRIVIAWKNVKCSFLNIDPMNGYLFWINKLISTTIERTSLAGKKRSSILNNLG
RVIGLTFDPVFRYIYWSDKLGQIEGANYNGLGRYTLLSSTSSYQPTYLNFYKNDIYWFDS
VEGRLMKVSTANQKADTKLDNSTHREGNVVLIMKNLKGLKGLRIGHPTVQSGDNYCSLPR
NSGCSHICLASSTPTTTTTTTLNHDGLYKGRNCICPAHLVPDDIQCIVPTHAMFIATAKS
LFNFVVDTASGNIVITPLPLTFVNVKAVAHDVTDNVIYLLDQGLGVVSVPLNDSYVLSPT
LVAPFSPKPPQQPFDMLIDPRDRALFWTDKSKNVIVMTSLGQELRHGIIDLVTENTLMGR
KARPRHLALAVESRLLFFVDEDHSIEYLDLNESENERQSKQRRHQPKNTRGANGIEPKIT
KTSKTVVQTYNSIGPIFVDESAKRIYWYNSFQKSIEFSNFDGSERSRLLKNVNHLSIFTI
INELLIWVDNRTNKMNAYNLSTGKVLDVHMTSLMEGITDIFEVSRSPTKKVDNRKEGKAE
ATICSTLGCSHGCNGTFNGCKCPKEMHLSDDGRTCVDSTCPPQSFSCRYLKFGYDASRNE
IKEEARSVREKVHFSRDHLVDVGSFVHCIPEKWRCDGEEDCDDSSDEINCTICQPDFFSC
PGDRKCLRRDMICNGNVDCGDASDELNCLMCMATHYNSFVLTPASELYECSEIECITSDQ
LCDGVSDCENGLDEMNCRKKNPVEKFENSANDSKTHFYMALTTVTICLLIIGMMMIAFCL
MKRGHKSCCRLSKKENLYTAPPTTATITNESYGICATASSSSPSKLLTSPPPPAYFSPPQ
FKLNNYRSSLDSSVSLLAADAIIGPYPSPATSFVESNRHHRRSFRYDPKSRTTASYYPAM
CNSSKSNEVCLACDDDNYDSKSQPPPPPTTPCSQFLSGNDMLASSSSIADSSNRYYRHDY
MKRKKRLCHSKIWDVTNDSSVYPPPSGRSSATLPPNPAPSLSAITATYSNNNNGADVNCA
TLPSMNDSTNVTADTNNVTDCSSDRCNNICSSNNHSNNTAFENMHPRLHSTPMKKSKSNR
HH
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgatgcgatcttggcaggtgttttcaagtgcctacacaatacagttctgatt
ggctttcgaaacagtgtgaccagactggaaacggacttgggtggtgggtggaggagtgga
gatgatgagcttctagaaaacaatgatagactggcaagaatagaacggtgcggtctgaac
gggaattccaggaaagttattcttagtaatccggatcttacagctccattttcactgact
ttagatgcaattgatgaacgtttgtactggtttgaaagtgccacactcaacattatgacc
tcagatttcaatggcgatgacgtcatagtcttccacacaattgaaaggaatcaccttccg
gtctacaccataacgatggccatttctcattccggatatttgtattacaccgaccattcc
caattttccgtaagcgctatgaaaaaatattcaaaaaattccgacgacacggaggaggac
gtgatttatgattttttgggacttccggattatccacagtgcttgagagttttcgaggaa
aatctatcttaccccaatcggacttctgaatttgcacatccctgttcttatttgtcgttg
gggggtccaaatccgccattttattcctgtgcttgcccagctggtgttatgctggcggat
gacgacgaccacgattgcttcgaaggtgtcattcgtattatacttattttgtattcaatc
caatttttaacatctctaccgaaaggttccaaaaagatcctcttggtagttcattactcg
aacatccgacttatctcactggatactactgcttttgctgatcaaatcataaacatagaa
tacataaacaaagatagtaaagttgttgctgctgattatgacccaatttacgagaaaatc
tattggacagatttgaaaacaagggcaatatataggtcaaacttgaatggatcaagtgca
gaaatgctactgagaaccaatgtctacgaaccagaaggcatagccgttgattggctgtcg
ggcaatttctattggacggatgcggcagccaacaaaattgaactcgtaaaaataccggcc
agtgataggtcagaaagatctaatttaaagtttgtcgagccaatcagaaaggtaataatt
caggatggtctccagaaaccgagggccattgttgtcgactcctttgccggttacatcttc
tgggcagactgcagcaacaaaaggggcaacaaaatcgaacgagcccgattggatggttcc
gaaagaacgctcgtcattgattggccgacggtcgtatggccgaatggattggccctcgat
cggccaatgagaagactgttttgggtcaaagctaagtctcacgtgatagagagcagtaat
tatgatggctctgattggcgggaagttgtatcacgtgacgtagttcacttgtttgggcta
tctcttattgatgaattcatatactggaccgactggagcactaactccattggaagggct
aataagattaccggtgggacgagaagcgaattagcgagtgacctccttgaacttgtaacc
gtcacagctgtctacagtaaggcacaatacatccccaacttcaattccaacgcaaccagc
ttaccttgttttgaggacaatggtggatgtagtgatttctgcctcatcacacccaataac
aacaccacaaccttcaatgagatagggggtaagaggagggcccaatgcctatgccctgat
ggttttatcctatccggggtacatatggatcagtgctctgaagtcaaaccaaatgttgtt
ctctacataaatggcagtttgaaggttttgcagatggagatgatgggagagggggagaga
aagatagagatgatgatgaaaaaagggagtggatttgaacacaacatgatttttcataat
agtagcgttgtttctggtactagctataatattattagtaatgctagtaacgtaattagt
aatggttacattaatgaggtgttatcgaaccacgtagagttgttctcattggatgagaat
aacgtggactcatttgattggctggttagggggcaaagtctcttctggttggacggaaga
aataagatcatatataggagaaatttcgttgaaatacgcgctgaagaccaacatagtaca
aaaagcgttaaaactccattcttaactaacctacaatctcttcctcttcagacatcatca
tcatcgtcgtcgtcaccgtcatcatcttcaccatcatcttcgtcgtcatcatcaacgtca
tcaatagcagtggattatatatcgggcaacgtatattttgtgatttccaacagaatcgag
atgttgactagtagtgccaagagtagaatcgtcattgcctggaaaaatgtcaagtgcagc
ttcctaaatattgacccgatgaatgggtatttattttggatcaataaactgatctcaact
acgatagaaagaacatcattggctggcaaaaagaggtcatccatattaaacaatctaggt
cgggtcattggtctgacctttgacccggtttttcgatatatctattggtcagataaattg
ggtcaaattgaaggggccaattataatggtctggggagatataccttgctgtcttcaact
tcgtcataccaaccgacatatttgaatttttacaaaaacgacatctattggttcgattct
gttgaaggtcgtcttatgaaagtatcaacagccaatcagaaagcagatacaaaattagat
aactccacccatcgtgaaggaaacgtggtattgattatgaaaaacttgaagggtcttaaa
gggctcaggattggtcatccaactgtccaatcaggtgataactattgctccttaccaaga
aatagtggctgttctcacatttgcctggcctcgtccactcctaccaccactaccactact
acgctgaaccatgacggcctttataaaggacgcaactgcatttgccccgctcatctagtt
cccgacgatattcagtgtatagtgccaacccacgcaatgttcatagcaacggcgaagtct
ctattcaacttcgtcgtcgacacagccagcggcaacattgtgatcacccctctgccctta
accttcgtcaatgtcaaggccgttgcgcatgacgtcacggacaacgtcatctacctcttg
gatcagggattgggagttgtttccgttcctctcaatgattcttatgtgctctcgccaaca
ctcgtggcaccattcagcccgaaacccccacaacaaccattcgacatgttgatcgacccg
cgagatcgcgccctcttctggactgacaaatcaaaaaacgtcatcgttatgacgtcacta
ggtcaggaattacgtcacgggatcattgacctggtcactgagaacactttgatgggtaga
aaggctaggccgaggcatcttgctcttgcagtcgaatccagattgttgttttttgtcgat
gaagaccattcaatcgaataccttgacctgaatgaaagtgagaatgaacgacagtcgaag
caacgacgccatcaacctaagaacacgcgcggtgcaaacggcatagagcctaaaataacg
aaaacatcgaagacagtggtgcaaacgtacaactctataggtccaatttttgtagacgaa
tccgccaaacgcatctactggtacaattcattccaaaaatcaatagagttctcaaacttt
gatggctctgagaggagtcgtttactgaagaatgtcaatcatctgagtatttttacaatc
atcaatgagcttcttatttgggtggacaaccgcacgaataagatgaatgcctacaacttg
tcaactgggaaagttctagatgtccatatgactagtctgatggaaggaatcacggatatc
tttgaagtttcaaggagtcctacaaagaaggttgacaaccgcaaagagggtaaagcagag
gccacaatttgcagcacactgggctgctcccatggttgtaatgggaccttcaatgggtgt
aagtgcccgaaggagatgcacctttccgacgatggcagaacttgcgtggacagcacttgc
cctccgcagagtttctcctgtcgctacctcaagtttggttacgatgcgagtaggaatgaa
attaaagaagaagcgaggtcggtcagagagaaagttcatttttcgagagatcatctggta
gatgtgggtagtttcgttcattgcatcccggagaaatggagatgcgatggagaagaggat
tgcgatgattcctccgatgaaattaactgcaccatttgtcagccggatttcttttcctgt
cctggcgatagaaaatgtttgagacgcgatatgatttgcaatggaaacgtcgattgtggc
gacgccagtgacgagttgaactgcctgatgtgtatggccacgcattacaattcattcgta
ttaacgccggccagtgagttgtacgaatgctctgaaatcgagtgtatcacatcggatcag
ctatgtgatggagttagcgattgtgagaatggattggatgaaatgaattgtcggaaaaag
aatccggtggagaagtttgaaaattctgccaatgattcaaagacacatttttacatggcc
ttaacaactgtaaccatctgcctactcatcatcggcatgatgatgattgctttctgtctg
atgaaacgcggtcacaaatcatgttgtcgactttccaagaaggagaatctgtacacggca
cccccgaccacggccacaatcacaaacgaaagctacggcatctgtgcgacggcttcatct
tcatcaccatcgaagcttctcacttctccacctcctcctgcttacttcagtcctccacag
ttcaaactgaacaactaccgctcgtctctcgattcgagcgtcagtctgctggcagccgat
gcgatcatcggtccttacccatcgccagccacaagtttcgtcgaatccaatcgacatcat
cgtcgaagtttccgttacgatcctaaaagcagaacaactgcatcctattaccctgcgatg
tgtaacagcagcaagtctaatgaagtttgtctcgcatgtgatgacgacaactacgactcg
aaatcgcagcctcctccgcctccgaccactccttgcagccagtttctttccgggaatgat
atgctcgcatcttcatcatccatagcggacagtagcaatcgctactacaggcacgactac
atgaagcgcaagaagagattatgccattcaaaaatctgggacgtcactaacgattcgtcc
gtttacccgccacccagtggcaggtcctcagccaccctcccaccgaaccctgctccaagt
ttgtccgccatcactgctacctactccaacaacaacaatggtgcagacgtcaactgtgct
actctacctagcatgaatgacagtactaatgttactgctgacactaacaacgtcaccgac
tgtagcagtgacagatgcaacaacatttgtagtagcaacaaccacagtaataatactgcc
ttcgaaaatatgcatcctcgcttgcattcaacccctatgaagaagagtaagtccaaccgt
catcattag
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integrated database retrieval system