Helobdella robusta: HELRODRAFT_176731
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Entry
HELRODRAFT_176731 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K11644
paired amphipathic helix protein Sin3a
Organism
hro
Helobdella robusta
Pathway
hro04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
HELRODRAFT_176731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hro03036
]
HELRODRAFT_176731
Chromosome and associated proteins [BR:
hro03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
HELRODRAFT_176731
REST complex
HELRODRAFT_176731
Heterochromatin formation proteins
Other heterochromatin formation proteins
HELRODRAFT_176731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
DUF3744
Motif
Other DBs
NCBI-GeneID:
20205945
NCBI-ProteinID:
XP_009022329
JGI:
Helro1_176731
UniProt:
T1FAU6
LinkDB
All DBs
Position
Unknown
AA seq
1798 aa
AA seq
DB search
MQNQDKSFSSNLSQPLLQKVYVQTSNAQSSSLNPYNLIRYQGPNALHLVGGTPSSNLHLQ
PMSSLITTSASIYQPNQMSTWNSSSQNNNSSSTIDQPAILHQPQPQQPPQQQQPQQQQQH
INTQLQQKLKVEDALTYLDQVKLKFGHRPQVYNDFLDIMKDFKSQNIDTPGVISRVSILF
QGHNELIVGFNTFLPQGYSIEVQNNETINVHQPGQQVVSLSSLGNYTTTAATNNIIGTAG
AAANTGTVLPGNDRVSSAGNNGGAGIRGGSVGSTNNHVGGALVGGGHAATVPVTAGGSKG
AKTGVGDVSKQQQLMNNNNNSSSSSTNFENMSQASINSFSTSNNVTNNATTNSNNVPSNS
QGQPVEFNHAINYVNKIKVTVVYQGRPEIYKKFLDILHNYQEEQKYSKEQVYRQPSNRSP
VSEAEVYEQTLKSGPKSQKAKKVGFGPGPGPNSGASLVVSKLFHDQPELLREFRQFLPDA
NGGNDLMRGVGLTRHQSVKQEMNPQQQQHSMKNNIHSPGRGKMSWSSSSSPSSFMPATKK
QKLNQRNVCNNISNNSLANNNSESINNSDYNFFDPELIKYLNKQSIKEPLYREVLRYINL
LMKKAINFAEFNKSVDPLVDKLPGLKSYFENYKSYFDGNGDNKSSITKSNKMHQTSSLHH
QQQHHHQLQHHHHHHPPSSSSSSSLLVVDFDSNKLMSGGSMSVADRRSCALEGGGGSSKE
KIVKFDKHAHIDLSTCKQYGKHYRELPKNYIQETCSGQTELEEEVLNSTYVLFPVSGGDE
ENDRASNDDDDDDVSCRRNPLEDHVFQCEDERYELDMVMNLNMSVLLGLESLARRMRSMT
SDDLGRFQINDLSAAIGISELNIEIALKRVYGDKGLTLIEGLRKSPLVTVPIIIKSLRSK
DVEWKESKKSFERFWSEQMDKFYLKSLDFEGQRFKQVDSKYIRSKSLVKELENIIKTSQA
TKTASSNTAITTNNSNNNNVLSSKKKYDNEDDGEFEVTPAKKRKLSSTKSNDNNSNKANV
KNQEKNQPNESNKICNKSNTSHASTSANNNTSNDRGYSHFTDDYMNLSLQDYNVYHDAVS
LIISNITRQSGIQSEERDKMKRILSNFLPAVLIADFQYVFMTSSSSFSDAQNVEGDVKVK
KEYEEDGSVEFIQRIDAASLDFKKEPPYDEVTSNKTNNLGSVKSVAFKAKSKAQQTAAST
PLQHPPSSPALQLNSSSSSSSCSSSQTTIFYCNENWYVLLRLMLLICERLLILKKRSEEL
SMEEEKNKLLRDVMTLRAVQAKCPESLDPSSFYSTALDMVKNLMSGSLDVGSYEDQLREM
FGVNCYHVFTLDKVVQNAVRQLQHASNKDESQLLLEAYESYLQRHVDVDEYRTKCQSLLS
EKTCYQFVIVKGESSADVKISILPEAQTVSDLETSLEHHHQQQPQLNEGQDGNLPKQSTT
SSLPLQRDGLTWNSVSNNPVDETDAMDVGDYGRNDTVASDDRGSSDQVHYELHLRRSHVF
KFPDFLRKFRHRKDIQMNNPPEYVDPKNVDARLAHVVSLLDYAGRDFVRRKEQLNMPDNL
DDSNINKSGEYDDNNISDQSAGNEGMADEDNARHPFVNSQVDKSYLMNKFNNASECGNSD
SSFSSETGSRLMMELGCTKIFVFKANALSKAQKSHRKTTLRRLKRFNEWLYKWTSKNITE
DQMATCNQWFEGSNMSTDLPFLCKQDDGGQTEQRKIKRVVMNSHLLITHKVNDNNLTATS
ETQLHVINDIRFEGNIDAGDTGDDNSLTPYRPYYKYLLTPKHSKSEEPPVSTSSSSSS
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcaggataaatcatttagttcgaatctgagtcagcctctccttcagaaggtt
tatgtccagacgagtaatgcacaaagttcttcgttgaatccctacaacttaatcaggtac
cagggcccaaatgcattgcatttagtgggaggcacaccatctagcaaccttcaccttcag
ccaatgtcatctctgataacaacatctgcatccatttatcaacccaaccagatgtcaaca
tggaactcctcatctcaaaataacaactcatcttccacaattgatcagccagccatcttg
catcaaccacagccacagcagccacctcagcagcaacaaccgcaacaacagcaacaacac
ataaacactcaactgcagcagaagttgaaagtagaagatgcactgacctacttggaccag
gtcaagttgaagtttggtcaccggcctcaggtctacaatgatttccttgacattatgaag
gacttcaaatctcaaaacatagatacgccaggagtgatcagtcgagtgtccatcctattc
cagggccacaacgagttgatcgtgggcttcaacacctttcttcctcaaggatacagtatt
gaggtgcagaacaatgaaactatcaacgtccaccaaccaggtcagcaggtcgtctcactc
agctcgttaggcaactataccacaactgctgccaccaacaacataattggtactgctgga
gctgctgctaacaccggaactgtactccctggaaatgatcgtgtaagttcggcggggaac
aatggtggtgctggcattcgtggtggaagtgtgggaagtaccaacaatcacgttggtggg
gctttagttggcggaggacatgcagctactgttcctgttactgctggtgggagtaaaggt
gcaaagactggcgtcggagatgtgtcaaaacagcagcaattgatgaacaacaataacaac
agtagtagtagcagcaccaattttgagaacatgagccaggcatccattaactcgttcagc
actagtaacaacgtcaccaacaacgccaccaccaacagtaataacgtccctagcaacagt
caaggccaaccagttgaatttaaccacgccattaattatgtgaataagatcaaggtgaca
gttgtttaccaaggcaggccggagatatacaaaaagtttctggacatccttcacaattat
caagaggagcagaagtattcaaaagaacaggtatatcgccaaccgagcaaccgatcacca
gtgtcagaagctgaagtttacgagcagacgcttaaatccggccctaaatctcaaaaagca
aaaaaagtcggatttgggccggggccggggccgaactccggtgcatccctagtagtgtca
aagttgtttcatgatcagccagagttgctacgtgaatttaggcagtttctacccgatgcc
aatgggggcaatgacctcatgagaggagtgggtcttacacgtcaccaaagtgtgaaacag
gaaatgaacccacaacagcagcagcattcgatgaagaacaacattcacagtccaggcagg
ggcaagatgtcctggtcatcttcgtcgtcaccctcctcattcatgcctgccactaagaag
cagaagctgaatcagagaaacgtttgcaacaacatcagcaacaattcactggcaaacaat
aacagtgagagcatcaacaattcagattataatttctttgatccggaactcatcaaatat
ttgaacaagcagtcaataaaggaacccttgtacagagaggttctcaggtacatcaatcta
ctgatgaagaaggccatcaactttgctgaatttaacaaatctgtcgatcctttggtggat
aaactgcctggtctgaaatcatactttgaaaattacaagtcttattttgacggcaacggt
gataacaaaagcagcatcaccaagagcaacaaaatgcatcagacgtcatctctccatcac
caacagcagcatcaccaccagttacaacatcatcatcatcatcatccaccatcttcatcg
tcttcgtcgtcattgttggtcgtcgactttgactcaaataagttgatgtctggaggaagc
atgagtgttgcagaccggagaagctgtgcacttgaaggaggtggtggcagtagtaaggag
aaaatagtgaagtttgacaagcatgcacacattgatttgtcaacatgcaagcagtatggc
aagcattacagagaacttccaaagaattacatacaggaaacatgcagtggacaaactgaa
ctggaggaagaggttttaaacagcacctatgtattgtttcctgtctccggcggggatgag
gaaaatgatcgtgcaagtaatgatgacgacgacgatgatgtttcctgcagaagaaaccca
ttagaagatcacgtcttccagtgtgaagatgagagatatgagctggacatggtgatgaac
ttgaacatgagcgtcctgctgggtttagagtcactggcgcgtcgcatgaggagcatgacc
tcggatgaccttggaaggttccagatcaatgacctctctgcagccattggaatatctgaa
ctcaatatcgaaattgctctcaaaagggtttatggtgacaaggggttgacgttgattgag
ggcctgaggaaatctcccctcgtcactgttccgatcatcatcaagagtctcaggagcaag
gatgtcgagtggaaggaatccaagaagagttttgagagattctggagtgagcagatggac
aagttctacttgaaatctctggactttgaagggcagaggttcaaacaggtggattccaag
tacatcaggtccaagagtttggtcaaggaacttgaaaacatcattaaaacttcccaggcc
actaaaactgcttcttctaatactgctattactactaataatagtaataataataatgtg
ttaagtagcaaaaagaaatatgataatgaagatgatggcgagtttgaagtcacacctgcc
aagaagagaaaactatcatccactaaaagcaatgacaacaacagcaataaagcaaacgtg
aaaaaccaagaaaagaatcagcctaatgaaagcaacaaaatctgcaacaaaagcaacaca
tctcacgctagcaccagtgcaaacaacaatacaagcaatgacaggggctacagccacttc
actgatgattacatgaacctctccttacaagattacaatgtttaccatgatgctgtctca
ctaatcattagcaacatcactcgacagtcaggcattcaatcagaggagagagataaaatg
aagcgcatcttatccaatttcctgcccgccgttttaattgctgactttcagtacgttttt
atgacgtcatcatcgtcttttagcgatgcgcagaatgtggagggtgatgtaaaagtaaag
aaggaatatgaagaggatggcagtgttgaatttattcaaaggattgatgcagctagtctt
gattttaagaaggagccaccttatgatgaagtaacaagcaacaagaccaacaatttaggt
agtgtcaaatcagtggcgtttaaggcaaaaagtaaagcacaacagacagccgcatcgaca
cctctgcagcatccaccatcatcgccagcattgcaactgaattcatcatcatcatcatca
tcctgctcgtcatcacagaccacgatattttactgcaacgagaactggtacgtgctgctg
aggttaatgttgctgatttgtgagaggttgttgatattgaagaagaggtctgaggaactt
tcgatggaggaggaaaagaacaaacttctacgtgatgtcatgactctcagagccgtacag
gccaaatgccccgaatcgttggatccaagttccttctactcgactgctcttgacatggtg
aagaatttaatgagtggcagtttggatgtcggctcgtacgaggatcagttgagggagatg
tttggagtcaactgctaccatgttttcactctcgataaagtcgtacagaatgccgtcaga
cagttacaacacgcgtctaacaaggatgagagccaattattgctggaggcttacgaaagt
tacctgcaacggcatgttgatgtcgatgaatacagaaccaagtgccagagtctgctctct
gagaagacttgctaccaatttgtaattgtcaagggagaatcatctgctgatgtgaagatc
agcatacttccagaggcacagactgtcagtgatctggagacctcgttggagcatcaccat
caacaacaaccacagctaaatgaaggccaggatggaaacctacctaagcaatcaacaact
tcgtcgttaccgttacaaagagatgggctgacttggaattcggtgtctaacaatccagtg
gatgaaactgatgccatggatgttggtgactatggaaggaatgatacagtagcatccgac
gatagaggatccagtgatcaagtgcactatgaattgcatttgcgacgtagccacgttttc
aagtttcctgatttcctgagaaaattccggcataggaaagatatccaaatgaacaatcct
cccgagtatgttgatccaaaaaatgtagacgcccgtctagctcacgtcgtcagtttgtta
gattatgctggtcgggactttgttcgaagaaaggaacaactaaacatgcccgacaatctt
gatgatagtaacatcaacaaaagtggcgagtacgacgacaacaacatcagtgaccagagt
gctggcaacgaaggaatggctgatgaagataacgccaggcacccttttgttaattcacaa
gtagacaaaagttatctgatgaacaaattcaacaatgcctctgaatgtggcaactctgat
tcttcattctcatctgaaaccgggagtcggttgatgatggaattaggctgcacaaagata
tttgtattcaaggctaatgctttgtctaaagctcaaaaaagtcaccgcaaaacaacgctc
cgcagactgaaacgttttaatgagtggctgtacaaatggaccagcaaaaacattacagag
gatcagatggcgacgtgtaatcagtggtttgaaggatccaatatgtccaccgatttgcca
tttttatgtaaacaagatgacggtggacaaactgaacaacgtaaaattaaaagagttgtc
atgaattctcatctgctaataacacacaaagtgaatgacaacaacttgactgcaacatcg
gaaacacaactacatgtcataaatgacattcgatttgagggcaacattgatgctggtgat
acaggtgatgataactcattgacaccgtacagaccttattacaaatatctactaacgccc
aaacattcaaaatccgaagaaccgccagtatcaacgtcatcatcttcatcctcctga
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integrated database retrieval system